Os03g0418700

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0418700| Description = Conserved hypothetical protein| Version = NM_001056911.1 GI:115453550 GeneID:4333124| Length = 4676 bp| Definition ...")
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Gene Name

Os03g0418700

Description

Conserved hypothetical protein

Version

NM_001056911.1 GI:115453550 GeneID:4333124

Length

4676 bp

Definition

Oryza sativa Japonica Group Os03g0418700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18058073..18062748

Sequence Coding Region

18058423..18058573,18059232..18059299,18059408..18061072,18061172..18061313,18061818..18062569

Expression

GEO Profiles:Os03g0418700

Genome Context

<gbrowseImage1> name=NC_008396:18058073..18062748 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18058073..18062748 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtcccggatgatgcaggcgttcgcgcaggaggcttccgacttcgaccggcagatgggctgcatggccggcatgttccagatcttcgaccgccgccgcctcctcaccgcgcgtcaacgcggcggagcccgaggcacggcgccaccaggccatgttttgccaaacagcaacagcaatgtctcgattcaaaacccagttgcttcaaacaacactctggacaaaaccttcagcaaaagtatgaccgagaacagtagcctctccatggaatcatcgcgggcatcttcttcttcctcatcgtgctcttcgttctcgtccacagacatcaacagaccaatacaacaagagctctcctacatcaacaaagagcgttttgctgggaagccaccaagaagctcacagacaaagagtgtgaaatgttccaagacagaggccaaaaccaaagacccacacactggctttagagacattgtcaaggagtccatcaaccgggaaacccatggtatgaccatcaagacgtcgacaaaggagtccagaaaaggattgcacaaagactcaccaaggccgttgctgatctccaaatcaaccgatggaacttacgtgattgggatcgacaggagcaccggcgttcctggatatgttcatgaatccagcaggccaccacgcttctcatgcgacgatcggcaactcctgaggtcggtcgaagcgcaagacagcaagaagccttcagcaaagctcaaggagcttcccaggctgtccttggacagcagaaaagaatccatgaatccatgttcacgtctgaagaactctggctacataagaactgatgacaacctcctggatgttctgaagcaccaagaatcgccgagccatcagcgggccagcagcgtcgttgccaagctcatggggttggaaggaactactcctgacatccatgagacggcaaggtcacctacacctgtccatggcacgcaaattgatcagccgtcacactgtcaaaggatcaagaaccaagatcatagtgtcccggtgcagaagaatcactctccagtactgaaaaccaatccttctccaagaattatccctgaagcagccccatggagacagaatgagagagctgtaacaggacgtgcagctgaagtgaagccaagaactgcatccatctatgctgacatacagagaagactcaggggtctagagttgtcggaatgcaacaaggaactgagggctctcaggatattgagcacactgcacaaaaaggatggcccaagccagagcgacaacaatcctgaattaacagccattcaaaagaaggcctctgaacaaatagttgattctgaaaatttccagtctccaattgtgatcatgaaaccagcaagatgcatcacaaaacctgatgcttcagatactttggttgctcccctttcaaggccaaaaggcataagaagactacggcatgaagagacatctttcaccaggaagaatgaaaacagtgatagcaagagaaatcattctccgaatgaaagtgctcattccagtggtgaggaacctgtaaattctgcaagatcaccaaggctttccagctcattgagccccaggctggcacagaagaaggcggactctgaaaggaggtctcgtccaccggttttgccaacgtcaccaggcaagaaatctaaagaaacagtgtccccaagaggcaggctaagatcaaggcactcgcaaacaaagagcaactctgacaacgataatgtgttacacatccctgaaactaaaatcaatttggcaaagcagatcgatgtgggtgtcgttgatcatccgaatcctctgaatgccaactcaccatatatccatcaaagcaaaatagcttcaacacccaatcgtgaggaaatgcctacaattctacctgcagacaagaagaagatccatccacaggagaacatcccaagtcctgtgtcagttcttgatgcaacattttatcatgaggggtcatcgccttctctgaagagaatctcagattccttcaaagacggcgagacgcatacttcagatgagagttggaacccaacaagcctccctgatacaccaccttcaaaggcaagcaacgatggcaaccagataaaggcagaaaacatgaaagccctcatccaaaagcttgagctcttgcaaatgttgagtgaggaagctctgaaaaccgatgacactttttcatcagttgctgccaataaagatcaccagtacctctacgagatactttcagcatcagggatcctacacaacaaactaaattttcaaatgatgcctcatcagctgcgaccatcaagctacccgattaatccagagcttttcctcatccttgaacaagcaaaaccagacgaagaaaagctgcaccgtaggctcatatttgatcttgcaaatgaactcctcgcccagcaaatggatgccaaccacactgtgaattcatcagtgcagttctttcagtcaaagaagttaagtgggtggcaacttttcaaggacttatgtgcagagattgacatgatccagtctcggtcctcaatgataaggtgctctgaagaggaagatagcaggctagcagaggatgcaatgcaaggcatgaaagagtggaagagctccgacagtgaacggcaaggaattgttttggccattgaaaaatccatctttaaggatcttattgatgagataattagtggagtagacaaagggaaggtgcacctgacgcaatggaagctaaggaggcagctgtctttcatcagcatatag</cdnaseq>

Protein Sequence

<aaseq>MPSRMMQAFAQEASDFDRQMGCMAGMFQIFDRRRLLTARQRGGA RGTAPPGHVLPNSNSNVSIQNPVASNNTLDKTFSKSMTENSSLSMESSRASSSSSSCS SFSSTDINRPIQQELSYINKERFAGKPPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKE SINRETHGMTIKTSTKESRKGLHKDSPRPLLISKSTDGTYVIGIDRSTGVPGYVHESS RPPRFSCDDRQLLRSVEAQDSKKPSAKLKELPRLSLDSRKESMNPCSRLKNSGYIRTD DNLLDVLKHQESPSHQRASSVVAKLMGLEGTTPDIHETARSPTPVHGTQIDQPSHCQR IKNQDHSVPVQKNHSPVLKTNPSPRIIPEAAPWRQNERAVTGRAAEVKPRTASIYADI QRRLRGLELSECNKELRALRILSTLHKKDGPSQSDNNPELTAIQKKASEQIVDSENFQ SPIVIMKPARCITKPDASDTLVAPLSRPKGIRRLRHEETSFTRKNENSDSKRNHSPNE SAHSSGEEPVNSARSPRLSSSLSPRLAQKKADSERRSRPPVLPTSPGKKSKETVSPRG RLRSRHSQTKSNSDNDNVLHIPETKINLAKQIDVGVVDHPNPLNANSPYIHQSKIAST PNREEMPTILPADKKKIHPQENIPSPVSVLDATFYHEGSSPSLKRISDSFKDGETHTS DESWNPTSLPDTPPSKASNDGNQIKAENMKALIQKLELLQMLSEEALKTDDTFSSVAA NKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINPELFLILEQAKPDEEKLHRR LIFDLANELLAQQMDANHTVNSSVQFFQSKKLSGWQLFKDLCAEIDMIQSRSSMIRCS EEEDSRLAEDAMQGMKEWKSSDSERQGIVLAIEKSIFKDLIDEIISGVDKGKVHLTQW KLRRQLSFISI</aaseq>

Gene Sequence

<dnaseqindica>351..501#1160..1227#1336..3000#3100..3241#3746..4497#gcaatgccattgcacacatatcttctcgttcttaaatcaagctgctgcctctccctcctcctcttgacaagcaccattcctctcaactgaacctgtcaaacagagagagaagtagatgatagcgtgagagaatagaacagaagaaagaagataaaaaaaaagaaaaggaaaggaaagctctgtgtaaagcctgcatctacgtgctctctttggttggggtgttcttgctgctagaactagcttagcctggttctgccatggagtgaagaggcctctcgttcatctccgattcttgggggttgtcttcagctgttcagcaagagccgagagcttagcttggggcaaaggaaatgccgtcccggatgatgcaggcgttcgcgcaggaggcttccgacttcgaccggcagatgggctgcatggccggcatgttccagatcttcgaccgccgccgcctcctcaccgcgcgtcaacgcggcggagcccgaggcacggcgccaccaggtagtggtaccataccaattcttcttctctgtactcttctgcggcgtgtgctcttcgtgtagctcttcttcttcttcttctttctctctctctctctctctctctctctctctctctctctctcttttgctgccaaagtttatcacaaagacaaaactgaatactaactgtcctgtggagatatgaacagtgttactggcagtagatgctaaactagaacagggattaaaaaattgtttcgtttagaaagtactgctgctgccaagtaagaacaggggaaatttatagggaggtacatggtcatggacaagaaactgacacaagttcagaagctgcaggaatgtagatgtagcacatatgagttgtagtaatgggcaattgcacagtgaataatcagtcaagtaaaaatgaaatggtagtaaagtgaagtgctttttctattcagatatttggtattctttggctgaaacaaatcaatagatttcagtgatatgttcttgatcaaatccaacttttaaaattcagatatctttatgatattgatcttttccttccctcgatcaaattagatatttataatttaactgcggtaactttcttttggtttatacccaaatacagttcatattaataactgtttcctgaatactttctttaggccatgttttgccaaacagcaacagcaatgtctcgattcaaaacccagttgcttcaaacaacactctggtaattttcctactgtactgtgcatgacaaatatatatcccaagtatgcagttcatctgcctcaaacagactggtttttgactcaaaacataatacttacttgtgtaggacaaaaccttcagcaaaagtatgaccgagaacagtagcctctccatggaatcatcgcgggcatcttcttcttcctcatcgtgctcttcgttctcgtccacagacatcaacagaccaatacaacaagagctctcctacatcaacaaagagcgttttgctgggaagccaccaagaagctcacagacaaagagtgtgaaatgttccaagacagaggccaaaaccaaagacccacacactggctttagagacattgtcaaggagtccatcaaccgggaaacccatggtatgaccatcaagacgtcgacaaaggagtccagaaaaggattgcacaaagactcaccaaggccgttgctgatctccaaatcaaccgatggaacttacgtgattgggatcgacaggagcaccggcgttcctggatatgttcatgaatccagcaggccaccacgcttctcatgcgacgatcggcaactcctgaggtcggtcgaagcgcaagacagcaagaagccttcagcaaagctcaaggagcttcccaggctgtccttggacagcagaaaagaatccatgaatccatgttcacgtctgaagaactctggctacataagaactgatgacaacctcctggatgttctgaagcaccaagaatcgccgagccatcagcgggccagcagcgtcgttgccaagctcatggggttggaaggaactactcctgacatccatgagacggcaaggtcacctacacctgtccatggcacgcaaattgatcagccgtcacactgtcaaaggatcaagaaccaagatcatagtgtcccggtgcagaagaatcactctccagtactgaaaaccaatccttctccaagaattatccctgaagcagccccatggagacagaatgagagagctgtaacaggacgtgcagctgaagtgaagccaagaactgcatccatctatgctgacatacagagaagactcaggggtctagagttgtcggaatgcaacaaggaactgagggctctcaggatattgagcacactgcacaaaaaggatggcccaagccagagcgacaacaatcctgaattaacagccattcaaaagaaggcctctgaacaaatagttgattctgaaaatttccagtctccaattgtgatcatgaaaccagcaagatgcatcacaaaacctgatgcttcagatactttggttgctcccctttcaaggccaaaaggcataagaagactacggcatgaagagacatctttcaccaggaagaatgaaaacagtgatagcaagagaaatcattctccgaatgaaagtgctcattccagtggtgaggaacctgtaaattctgcaagatcaccaaggctttccagctcattgagccccaggctggcacagaagaaggcggactctgaaaggaggtctcgtccaccggttttgccaacgtcaccaggcaagaaatctaaagaaacagtgtccccaagaggcaggctaagatcaaggcactcgcaaacaaagagcaactctgacaacgataatgtgttacacatccctgaaactaaaatcaatttggcaaagcagatcgatgtgggtgtcgttgatcatccgaatcctctgaatgccaactcaccatatatccatcaaagcaaaatagcttcaacacccaatcgtgaggtacagaaaattaactgtagtaccacctctaaagaccttactgttatgaaaacattatctggcagtaacaactgattgacaaaacattgtttttcccaggaaatgcctacaattctacctgcagacaagaagaagatccatccacaggagaacatcccaagtcctgtgtcagttcttgatgcaacattttatcatgaggggtcatcgccttctctgaagagaatctcagattccttcaaaggtgaggacttggtctggcaagctattcttctgcaaactttttgagtttttatactgtttgtaactttgtttccatccactaaggaagctcaaactggttaggcataggacaagcatacttagctgtaagcacatccaccaatcatagtgacaggcaaccagtagccaatgcaccaagcatagcttgtggtcctttcagatcggaaggatcacagtaaattgacagttgcagatacacatgtgagtgtttgcttgtgccaaactgttagagagtacaattccttagctgcctgctgttgttcatgtctacagtctgcacctaacatctacaaggaaccccacatgttgcacttgccacgaaggaacatgatagtatgttggttaatgtgcagacatacttatgtagatgagcccaccaattattttgatttttatagatgagacagaatgtcagatagacaagaattatcaacttatcttttctttctttttttcacttgttcagacggcgagacgcatacttcagatgagagttggaacccaacaagcctccctgatacaccaccttcaaaggcaagcaacgatggcaaccagataaaggcagaaaacatgaaagccctcatccaaaagcttgagctcttgcaaatgttgagtgaggaagctctgaaaaccgatgacactttttcatcagttgctgccaataaagatcaccagtacctctacgagatactttcagcatcagggatcctacacaacaaactaaattttcaaatgatgcctcatcagctgcgaccatcaagctacccgattaatccagagcttttcctcatccttgaacaagcaaaaccagacgaagaaaagctgcaccgtaggctcatatttgatcttgcaaatgaactcctcgcccagcaaatggatgccaaccacactgtgaattcatcagtgcagttctttcagtcaaagaagttaagtgggtggcaacttttcaaggacttatgtgcagagattgacatgatccagtctcggtcctcaatgataaggtgctctgaagaggaagatagcaggctagcagaggatgcaatgcaaggcatgaaagagtggaagagctccgacagtgaacggcaaggaattgttttggccattgaaaaatccatctttaaggatcttattgatgagataattagtggagtagacaaagggaaggtgcacctgacgcaatggaagctaaggaggcagctgtctttcatcagcatataggccaaatttctgcttcttaggaagcttagctaatggtatatgtaaccgttttaaactggctatacaatccatgagttaactgacatatatatatctacatgagcaagcaaacagtaacactgagatcttgccaaccaaaaaaaaaaatatccaaagattccctcgaagatgttccctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0418700, RefSeq:Os03g0418700