Os03g0419100

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0419100| Description = Protein of unknown function DUF1675 family protein| Version = NM_001056913.1 GI:115453554 GeneID:4333126| Length = 3...")
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Gene Name

Os03g0419100

Description

Protein of unknown function DUF1675 family protein

Version

NM_001056913.1 GI:115453554 GeneID:4333126

Length

3190 bp

Definition

Oryza sativa Japonica Group Os03g0419100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18085379..18088568

Sequence Coding Region

18085718..18086216,18088008..18088432

Expression

GEO Profiles:Os03g0419100

Genome Context

<gbrowseImage1> name=NC_008396:18085379..18088568 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18085379..18088568 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgagggacttcttgggcgtgttcggcggcggcggcggcgagaggagggcggcgaatgggtccgggagcgcggtgggcggcgagtcggacgagatcgagctgagcctggggctgtcgctgggcggccgcttcggcaccgacatgtccccggacgccaagcgcgcgcggctggcgcggtcatcgtccatcgcgtccgtctgctccgtgtccgccgccgacggcgacccctcccccgcggcgccgctgccgctgctgcgcaccagctcgctgcccacggagaccgaggaggagcggtggcgccgcagggagatgcagaaccgccgccgcctggaggcccggcggaagcggctcgagcggaggatctccgtcgggtcgtcgtcggtcccgaacaagcccggcagggaggacggcggcgacggcgccgttaacaggttgcagctgaggaggtcaatcgggtcgcaggggagcagctcggccaacccgcaggatcaaggtcctgatggaagtgcaatctgccaatccacggaggcgagaagcccatcaacctctgatgataccaaccaaaacagtgcacttcctccaacagcatcaactggcaagccgctaaacggcaccgtgacacagcagtccccgttgcgaacgcttgggtcactgacaatgcggacgagcagcactggcgacatcgggaagatcatgatggacatgccaatggtgtcttccaaggtggaagggcccaatggtaggaagatagatggcttcctgtacaagtacaggaaaggtgaggatgtgagtataatgtgtgtctgccatggtaaattccatagtcctgcagagtttgtgaagcacgctggagggggagacgtctcaaatccgcttaggcatatcgtcgtcaatccctcgccatcggtgttcttgtaa</cdnaseq>

Protein Sequence

<aaseq>MASRDFLGVFGGGGGERRAANGSGSAVGGESDEIELSLGLSLGG RFGTDMSPDAKRARLARSSSIASVCSVSAADGDPSPAAPLPLLRTSSLPTETEEERWR RREMQNRRRLEARRKRLERRISVGSSSVPNKPGREDGGDGAVNRLQLRRSIGSQGSSS ANPQDQGPDGSAICQSTEARSPSTSDDTNQNSALPPTASTGKPLNGTVTQQSPLRTLG SLTMRTSSTGDIGKIMMDMPMVSSKVEGPNGRKIDGFLYKYRKGEDVSIMCVCHGKFH SPAEFVKHAGGGDVSNPLRHIVVNPSPSVFL</aaseq>

Gene Sequence

<dnaseqindica>340..838#2630..3054#gctggccgtgcagcgaatccgcgcatttttttctttttcctttctggtgatgggagttgttttagttctttgatttccgccgtggattcgccgctgattcttgggaggattggatttggcggccatgtgatttggtcttgtttgagcgagcacagtttggtgcaggtgcagggagggagttcgtcgtgtttttttttttttttgggggcgaattcttgattgttttggggggcttcttcttcttgcttggaggagcatgcaagaggaatagcatccttggagggattttttttttttgttggagaggtgagattgttaggaggtggtggtggttcggccatggcgtcgagggacttcttgggcgtgttcggcggcggcggcggcgagaggagggcggcgaatgggtccgggagcgcggtgggcggcgagtcggacgagatcgagctgagcctggggctgtcgctgggcggccgcttcggcaccgacatgtccccggacgccaagcgcgcgcggctggcgcggtcatcgtccatcgcgtccgtctgctccgtgtccgccgccgacggcgacccctcccccgcggcgccgctgccgctgctgcgcaccagctcgctgcccacggagaccgaggaggagcggtggcgccgcagggagatgcagaaccgccgccgcctggaggcccggcggaagcggctcgagcggaggatctccgtcgggtcgtcgtcggtcccgaacaagcccggcagggaggacggcggcgacggcgccgttaacaggttgcagctgaggaggtcaatcgggtcgcaggggagcagctcggccaacccgcaggatcaaggtataagcagtaatttgattaatttcggcatgttcaattgttcatactcttgtataagcagtaatttgatttcagcatgttcaattgttcatactcttgtatttctatgccttttaattaactattgtgcttgagatgcatcgcaaaaaggtttatcgttgtgagattctaacctgccaagttttagaatcgaaaattgtttctatttgttaatccaattttgttggttagattcaggctgtgtatatatggttgggaaatttcactaaaacttgaatataactagacttaggcagacttgtatttgaaattcggtaaatgccgctggaggttcgcttgcctaaatggtaggccaagatgtagtacgccggcaaaagttggcactagacgaaacagaccagattaacagtgcattttaggtcgtgactcatgactaggatgattgtctcctacgtgtgcatgtgttttggcgcacaaatctattgatttttgatattattatctcctacgtgtgcatggttttttggcgcgcaaagctattgattttcaaagtcctgacgtgcggacatatatagaagtatatgggattgtgatccacttacatgtgctgttcagtgttcactatcaggtatacttactgttttggctcacaaaatgattgctcttcctgttgaaatgtgttcaaagatctaaaagtatatgggatgctatcgacttacatcttctgttgtcatcatgtttttgtctaatggaaaattttaatttgattagtggatgaatctaaaggctgtgcatgcttgtcaaatcagaatgaaatttatctttgttgttggcttgaatcttaatcatgttaatgtttttcacgtacagtatgatgcaatttttggttcgccagtatgtaactatgatcatgtgccataatttgactttaggtgaggtaaatgttttctatgtttagaatgatgctttcaaccctttcaactagccatattttcttgaacaggctttattaccaatactttttaaaaaagaaacttctgaactactccaatgttctatttaggtatggttaggtgcagggatttagaccagggaaaaacagttagtggaaataaccataattccaattgacaacttttatgccatttgctgacatggcagaaaaagtgagattctaatcaactcttcctactcttcaccttttaattggtaccactgaattcaggttgtattcgaagtcagagtgttgatgatcaaaaattgtgtctcttgacaagttgttaaaaagaactcgacaagcagtttcacacttttctaagagatggcactggtacttcatttaatattttgaactatagaaggttcatgtttatgttagttccactagagcatacctcaatgacagcttaaatactgtttattaatatatatttttttggttagactttgaagggaccacatatagcattacctaaatttagcacttctctccgaactacataaggctattttgcatctaatgtgataatcatgaactcactaggtaacttgttattacactaaaaaaatgttcacacatcacgcttatgattcatgagtcctgaaagcatgcaaatatatatatttgatatttgattcatcgtgattggtacttggaagaatctgttgtggctagtacaaaattgtgttatcaaaatgagatggttgataaagtgaaaaataaatttgtggtcaaatttatgcttgaggctgtacatcaaggaaactcaaaactttcaatgttgttctcaggtcctgatggaagtgcaatctgccaatccacggaggcgagaagcccatcaacctctgatgataccaaccaaaacagtgcacttcctccaacagcatcaactggcaagccgctaaacggcaccgtgacacagcagtccccgttgcgaacgcttgggtcactgacaatgcggacgagcagcactggcgacatcgggaagatcatgatggacatgccaatggtgtcttccaaggtggaagggcccaatggtaggaagatagatggcttcctgtacaagtacaggaaaggtgaggatgtgagtataatgtgtgtctgccatggtaaattccatagtcctgcagagtttgtgaagcacgctggagggggagacgtctcaaatccgcttaggcatatcgtcgtcaatccctcgccatcggtgttcttgtaatcacaacctagggaggtttttcttcacattctttacctgttgaaaacctgtaacttgtgtttgtaacttctgataaacaccctgtttccgtgcgtgcaacggaacgagggtccaagcaaatttaccaaattgtgag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0419100, RefSeq:Os03g0419100