Os03g0424200

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0424200| Description = Protein kinase-like domain containing protein| Version = NM_001056931.1 GI:115453590 GeneID:4333147| Length = 7341 b...")
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Gene Name

Os03g0424200

Description

Protein kinase-like domain containing protein

Version

NM_001056931.1 GI:115453590 GeneID:4333147

Length

7341 bp

Definition

Oryza sativa Japonica Group Os03g0424200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18338671..18346011

Sequence Coding Region

18338978..18339199,18339365..18340108,18340174..18340412,18340504..18340606,18340836..18340940
,18341008..18341151

Expression

GEO Profiles:Os03g0424200

Genome Context

<gbrowseImage1> name=NC_008396:18338671..18346011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18338671..18346011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaccgggttctccaattctcgaatgaacagttttatctcatctgtactggttttgcacttcaacaagcaggaaataaaatttgaaccttcagtgtggtgtgaagccattgacattcataataccttttcagctggcgagattataactggggacattatttgcttccaaaaaatcttgaagccaccggacataccaaaatatccttctgttgcatcttttctccagcatgtttgtgatcggaagacgtatgaagaagtgaggaaggtacacattttagaagaggagattgttacattaaaacaccaggctgatacatatcttgttcagaaagaaaaggccgtaacagcgtatgatcagttgaaacatgaacgagacaatgctgtgcaacaagtgaatgaattacgcgaccagagcacacatatcattctcgatttctcccgcaaggacatggagcaagcaacagaacatttcaaaaatgctagggaggttggtgatactgaatatgggcacacatataaaggcatgatacacaatatgaaggtgttaatcaagctgtccagttcccaaaagttatttcaacaagaggtctctattcttcgccaatggagacatccaaatattatcacattcataggagtatgctcggaggtctccgctctagtatatgaatggctacctaatggaaatcttgaagaccgcattatttgcacaaataattctgcacctctctcttggtacaaccgcacacagatcattggggagatttgttgtgctctgcttttccttcattcgaacaagtctactgctttggtccatggtgatctcaggccttgcaacatcctcattgatgccaactacagaagcaagatctgcaactttggtatgtccaacctgtttctgcagcttgggaccttcccaccaaacctgacggcaaggctgccgtacatggaccctgagttcaacaccaccggagagctcacaacactctctgatgtctactcactgggtgttatcatcctacggctcttgaccggaatgccccccttaactctatcagagaaagttgcagaagcattggggagtgatagcttgcacttgctgatagataaatctgcaggggactggccttacattgaagccaaacaattagcactcattggccttagctgcactggaatgacgaggaagaaacggcctgatctcttaaacgaggtgtggatagttattgagcccctcacgaggaagcctcctgcagccacctggccatacttgcaatcagcatcaggagatagcagtgtacctgctgcttttatttgtccaattagcatggagatcatgaaagatccgcaagtggcatctgatggattcacctatgaagcggaggccataaggtgctggtttgatagagggattagtaggtctccgatgacgaatttggcccttcccaatctcaatctcgtccctaatcgtgtcctccgttctttcatccatgggtatcttcagcagcagcagccgaaccctgcttaccaacagcagttgtcagaaacctag</cdnaseq>

Protein Sequence

<aaseq>MQTGFSNSRMNSFISSVLVLHFNKQEIKFEPSVWCEAIDIHNTF SAGEIITGDIICFQKILKPPDIPKYPSVASFLQHVCDRKTYEEVRKVHILEEEIVTLK HQADTYLVQKEKAVTAYDQLKHERDNAVQQVNELRDQSTHIILDFSRKDMEQATEHFK NAREVGDTEYGHTYKGMIHNMKVLIKLSSSQKLFQQEVSILRQWRHPNIITFIGVCSE VSALVYEWLPNGNLEDRIICTNNSAPLSWYNRTQIIGEICCALLFLHSNKSTALVHGD LRPCNILIDANYRSKICNFGMSNLFLQLGTFPPNLTARLPYMDPEFNTTGELTTLSDV YSLGVIILRLLTGMPPLTLSEKVAEALGSDSLHLLIDKSAGDWPYIEAKQLALIGLSC TGMTRKKRPDLLNEVWIVIEPLTRKPPAATWPYLQSASGDSSVPAAFICPISMEIMKD PQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRVLRSFIHGYLQQQQPN PAYQQQLSET</aaseq>

Gene Sequence

<dnaseqindica>6813..7034#5904..6647#5600..5838#5406..5508#5072..5176#4861..5004#gcatagtcctctcctcatcccttctcctcttatttcctttcttttatttatgagaagatagatttccagagggggacgcttcaacttggaaaccttgaattttatttaccgacttgccgagcagcagcagcagcgaaaccctcctctttgcaaagcccccattgccgccatgccgccgccgtacagtcatatcaaggtgccgcagcgctgttgcgatcttccccgcgaccccttcttctcgcgcagattggattctccgcaccagcgcaaaatccattggggattcggattcttgaccacttgttgggtttgttggtctgattaggtggtaagggaagaggatttccgctcgcgtattggggaagatggccactacttcgatctcatcgacttcagcgcaatcgagggattcaacgtcccgcctaccatgaccatcctccgattcaaggtagtgaatcccataagatgggtgtgctgcttcttctaatgagttgcttactactgtagtagttgtactcttagtcctttcacatattgttgtggaatgtatagaggaatctgacaaacattagaagatgactattcggaaaattatgtcaagaataaatggtctgggatggatttggcaccatcctggcatcctatatcctatataggaaaataaggactaatttgttttgattgttcagttttttttttggaacagagtcagggaaaaaaatgttttttgaacagattcagaagaaaaaaaaatgataatgagcattaaggaaatggatcgcttgacttgacattttatatcttatgggaaccaatgcacaacttagaaagttcgtagtcattgtcatgacgagtatttatcctggaaaccatgtaaccaaccattgcatttggtttccttgtgaacttatcctatatacgccactcatggctgtgtgcattgcaagctgtagacgcggggttctttattccattatctaaaaaaaatctatacactccaaaaaagacaattggtacaatacagccagctcccaactattgtctcttttaaatatgctattttaggtttgctctaataaggacagcgtggttatttgcgagatgtataactttacacatgtaagctgacaaccctgtatgattgtttattgtgcagcttgtcgttcttatgtttcatatttcatatagagttctgataggttcaactttttacaggagaagctcacggagaaatttggaacccctctgcaatgtcaacgcctgtggtggtgggctagacgtcagaacaacacataccgtgttgacaggccgttgacaaccgaagaggagaatctacctgtcagtaaaacattgtgatcaccttattttctgttggttcttaatactgttttgtcccatgcagtaaaaaatgctctttcatttgaacctaaacagttatgtgctgagtaagaaattagagaatgaagggttcccttcaagcctgtgcatgtctgatcggtcagactgaagtattataaactacaaatagatccattacctcatttttctagaggtttcacatgattttttcccttccattattggcttcattctgcaccataattttgaattatgaatcctgcttacttagattgcagatgcattttgtttagtgctggtaagtgtcaaaggctagtttgcagtcattctgcacttgccatgtcatcttcctcaaaagtgtgctgaagagaagatgaagtttcgaaagcaaaatgtgactatcaatttgttgcttttttaagcatacctgcttgggtatatcgactttcagcagcttgttatatatctttaatctaaagtcttctgtgtggagtaagaaatcaaaatgaagggtttccttcaagcctgtgcatagctgacaggtcagtctgaaccaacaccaactaatagatctagcccctcattttctgtagatggtaacttctcatgaatgttgtcctgccataattaacttacttggcaccataattttgaattttgaattctgctcacaatatgatgggtacctagtgtcgagtaccctaatctcaccctctctttcacagtaccaacaatagtcaatacgttaactctctgaatcatctacaagacttaatatggcattcagcccaactatgattaggcatgccggcaaattaactggattccacctctacatagtatggttcttaggccatgcactcgacatggactcaaacatgaaaaaagaaatataattcaaacttcaattaaacacctctagaaaaaataaaatagctcggctctttggctaatcgcatttgctaatacattactgctactatagaccatcgactcaattaaaactaaaggaaaaatgtgactctaaaattggttcagtaactcacttccatgaatggcgcattaataaagcagcaactacagttggtttgttcgcttcttatttcacaaagacatgcaagaaaccatcagggattattataggagccttgtacacatctccatccattgcagatgttgtctgtttagtgctgccaagtgccaaatgttagctcccagaccccagtcattctgcactttccttgtgattcccttaaaaggcgcgctaaggagtggatgtagttttcaaaagcaaaaaaaaattcttttaattgattgcttttttaaggcatacctgcattggtatattcactttcagcagcatggtatattactatatttgtaggcgtaccatcttgatcagatagcatcctattaaattttgaatgaaatatggtatgtgccgttattacccttatatttctttccatttattttatagctatgcatgccctttctgtgtaggaagtatgctgtattttgatctactgagttcatacagagagatatatactctttggtttagtgaaaattaaagttatgaatgcacactcttgtaggtagaaagtctaatttcagcattgtgtttcgaaggagatcatctacagctttttctggaggttaagcttgaactttagataatatattttagagtaaatttcattcaatcctaggtattgttgtctaagttgcacaaaaccatatgggttttagcacgtggcacttaaccccaagtattatggctataaagtttcacaaaaccacattatttatcatccacacttttgagttctacaatcacatctcaaatttatgagctctttatccatcatataaatattacacgcatctaagtaattttttaattctttttgatataagagtatgtaaaattggttaccactatggtttttgtgaaactttaggaccataatacctagggttatgtgtcatgtgccaaaatttctgtggttttgtgcaacttggaccataataggtggttttatgaaatttactctatattttattgtttatttggggggaaaggacccttctggtttcatccattgatttgtcattctgtcaaagtctcagaatattgtcacattttaggtgctcaacactaattccctaccaacatggagcaacatggatgatgcactggtgtttctaaagcattatgacccagggaaagcacagctaaggtcaacttctttgctgcatttttttgtcttatttatcagttgataaggctgactaaaatttgtttctttgaatgagaaattaggtatgttggattgctgtccgtgaaagttgcatcgaggccttcagaaattcttccaaaactaagaagtctagctggtttctgtttaagcgaaatgatagaattgtacgaggtcagactttctttttttttttttgccgggccagccaagaaaggccaaccaaatttacttaagattgaagaatatatacaaatatacaaagttattacttcaacaagaagctgtcgaagtaatggaaattgtcaccggagcaacttcccaaaagccaaagattacactaagagactactctcctatatttctgaaaaccccagcttccttccaaatcgccacttcctctttgattgaaccaaacaggaaaccggctgagcgccgctggttctgaaacacacgcgcatttctttccttccaaaccatccaacaaacaagcagcacaaggctgtcaatggcgtccctgtagttgttccgaaaattttgccgcatcgctaaccaccattcgcccaagtccaagcctgactcagatggcagcaggaagccaaccccaatccagcccttgatcattctccacaccctggtcgtgtaggtgcaagacacaaataggtgttcacaatcttcatcacccaccaagcaaagttggcaaacctgctggtgcggccagccacgcttacttagattatccgccgtgaggcatcgccctttttcggccaaccacataaagaatttcacctttgacagcgctcttgtttgccaaatcagagtaccacatcgcgccaccgtgtttgccatgaagaacatgctgtaggccgagcagggagtgtattttccatttggtgcccacttccagattgtctcatcttcctccccatcttgaagttgcaccccctggaccgcgtcccaaatctgaaagtattccccaattgcgtgattggagggtacccccttgatgtctcgtacccacctgtggttcagaagccctcgtgccaccgtcaagcccgagcgctcgacatggctgaagatcaaggggaatctcgactttatgctccccaccggcaaccagtccgccagccaaaatttggtgttcttcccatcacccaacacttgtctcgttcatgcgaggtagaggtcttgcaagtctttcgactgatctattggaaccgtgaggtcagactttctactgatgcaaaccgggttctccaattctcgaatgaacagttttatctcatctgtactggttttgcacttcaacaagcaggaaataaaatttgaaccttcagtgtggtgtgaagccattgacattcataataccttttcagctggcgaggtttgtttctcttttgtacactcccgttcttccgtaaaattgtaatttcatctctttctttctgcagattataactggggacattatttgcttccaaaaaatcttgaagccaccggacataccaaaatatccttctgttgcatcttttctccagcatgtttgtgatcggaaggtagttctacgttgctctcttcttccctgctgtaggttttttttaacaggaactttactgtattttcagtaaatattttttcatattgttcttccttgtatgctttcatggcttttgatcatccataaaagtatcttgatggtgtggctataagttcaaagttgagttcagctgattttttgtattgatcttttacatttaaccaattatatattccttatttaattagacgtatgaagaagtgaggaaggtacacattttagaagaggagattgttacattaaaacaccaggctgatacatatcttgttcagaaagaaaaggccgtaacaggtatatcagcaagactgtcagtttttgtcttgttatgagttaaaagatagattaacggcaacaatatttaaaccccgtctttgtaatgaagcgtatgatcagttgaaacatgaacgagacaatgctgtgcaacaagtgaatgaattacgcgaccagagcacacatatcattctcgatttctcccgcaaggacatggagcaagcaacagaacatttcaaaaatgctagggaggttggtgatactgaatatgggcacacatataaaggcatgatacacaatatgaaggtgttaatcaagctgtccagttcccaaaagttatttcaacaagaggtaacctggtccacttgtgatactctgtgttggttgattccattagtaatatgagattattgcaggtctctattcttcgccaatggagacatccaaatattatcacattcataggagtatgctcggaggtctccgctctagtatatgaatggctacctaatggaaatcttgaagaccgcattatttgcacaaataattctgcacctctctcttggtacaaccgcacacagatcattggggagatttgttgtgctctgcttttccttcattcgaacaagtctactgctttggtccatggtgatctcaggccttgcaacatcctcattgatgccaactacagaagcaagatctgcaactttggtatgtccaacctgtttctgcagcttgggaccttcccaccaaacctgacggcaaggctgccgtacatggaccctgagttcaacaccaccggagagctcacaacactctctgatgtctactcactgggtgttatcatcctacggctcttgaccggaatgccccccttaactctatcagagaaagttgcagaagcattggggagtgatagcttgcacttgctgatagataaatctgcaggggactggccttacattgaagccaaacaattagcactcattggccttagctgcactggaatgacgaggaagaaacggcctgatctcttaaacgaggtgtggatagttattgagcccctcacgaggaagcctcctgcagccacctggccatacttgcaatcagcatcaggagatagcagtgtacctgctgcttttatttgtccaattagcatggtaaataaatctgtaatcattatttttgcagcttcaattctggataaatgctcctaattctcctttaactgctgaatatcctttttctattttttcttgaaatcttcagaaaccaaaacttttacagtgcatatgtgatatgtttctctcctgctaatatttcaggagatcatgaaagatccgcaagtggcatctgatggattcacctatgaagcggaggccataaggtgctggtttgatagagggattagtaggtctccgatgacgaatttggcccttcccaatctcaatctcgtccctaatcgtgtcctccgttctttcatccatgggtatcttcagcagcagcagccgaaccctgcttaccaacagcagttgtcagaaacctagtttctggagtgtattttttcttttgtaagtaacagcaagagggctgtcgttatttcagataagtaggcagtaacagtgaagtacaaaatggcaagaacaacaaatacagggggaactttactagacaaatgctcaaatagggtcgggctgtcgtaatttcagttaatggagaggaggaaaaggaagatgggtgtaattttggacatttcatctgatggtgtggcaaatgagcaaattggaccatcaactttctggcattttagcaaagcaaccaacttcgtggcatttgagagaatgccacatgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0424200, RefSeq:Os03g0424200