Os03g0425800

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0425800| Description = Similar to MYBY2 protein (Fragment)| Version = NM_001056941.1 GI:115453610 GeneID:4333157| Length = 3688 bp| Defini...")
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Gene Name

Os03g0425800

Description

Similar to MYBY2 protein (Fragment)

Version

NM_001056941.1 GI:115453610 GeneID:4333157

Length

3688 bp

Definition

Oryza sativa Japonica Group Os03g0425800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18416378..18420065

Sequence Coding Region

18416379..18416501,18417614..18417761,18417831..18418085,18418169..18419334

Expression

GEO Profiles:Os03g0425800

Genome Context

<gbrowseImage1> name=NC_008396:18416378..18420065 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18416378..18420065 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcacgatttgcccccaaattcgcgatccccccttcttctccggctcagattccggcgagccctcgcccccgacccccaaattggccgcggatccgagcccccctcgccgccggcttccgatcggatagtatggtgttttcgcacaacaaaaattccaaccagtttgaccctctttcttatgttaacctgagtggactagatgctgacagtcaatctgtttcatttactgacatgaactcaagagatgctccttcaaattcacatgttacagatgttggaaaggagaatatgttgaataacccagaggaatcaaagatagcaagcactggtctgaagcctggttctccaatttctcctgagaacttcagtttttcttctctcccaggcagcagttgtcatttgtctacgctggatcatggcaagcgacctctttctgatgtcaggccattccaggttgcttgtaagcgtccgaagcaaatagacgaaaatacctggtcaacgagcacgtttgagacatccttttcagatttagctgatgagaccagagagccagattacatctatcataatagtggtatctcagcctgcaatactagttccagcatcccttactctaatctcgagcaattaattggagaggagaacttatacttacctgattgggtgactactttccctggttatactggagatttttggccagcacctgtggctgatcaggttgatgacattgactctcctatccatgaccacctcccaagaaaagctgtggcaattggacctgaccaccaggcagacattccagaatggaggcctaggatttcgatgaccgtgccctacggttctggttcttgtgctgatctgtcatacagttctgtttccacttcagggtctgctcccagggatgaggacagtgaaagtgataagtggatcaagcactgtgtcattgaaatgccatcctcatgttctgttgcttgggttggagaccatggaagagattgtgggtgcagtgatgagggttccattagatgtgtaagacgacatgttttggaatccagagaaaacctcaaaagaatatttggagaggacaaatttcgtgagttaggtctttgtgatatgggagaagatattgctcagagatggacagatgaggaggaaagtctcttttatagagttgtttactctaatcctccttccttgggaaagaacttttggcattttctcccacgagctttgcctggtaaaactagcatggagcttgtcagctactatttcaatgtcttcatgcttcgtaagagggctcagcaaaacagatcggagccattgcacgtggacagtgatgatgatgaggttcctgatgagccttctgtaacagaggatgaggattctgcagttgagtccccagcacatgattattacgtgaacaatcccatgtccccagagtctgaagactccttccatgagaaggtagctgatagtttatctgggctcagagatggaccaagccagaagcctctgggatccaacacagataatcctggaggtgatgccgacgtccaagacgagtcatgcacatcatttgaggaccataatggagcgcatggatctaatggtgttcaatgtgctgagtttcacatgatgctgccaaatgctgctctagaccactacagtgaccgaggtgcgtgcatgtag</cdnaseq>

Protein Sequence

<aaseq>SRFAPKFAIPPSSPAQIPASPRPRPPNWPRIRAPLAAGFRSDSM VFSHNKNSNQFDPLSYVNLSGLDADSQSVSFTDMNSRDAPSNSHVTDVGKENMLNNPE ESKIASTGLKPGSPISPENFSFSSLPGSSCHLSTLDHGKRPLSDVRPFQVACKRPKQI DENTWSTSTFETSFSDLADETREPDYIYHNSGISACNTSSSIPYSNLEQLIGEENLYL PDWVTTFPGYTGDFWPAPVADQVDDIDSPIHDHLPRKAVAIGPDHQADIPEWRPRISM TVPYGSGSCADLSYSSVSTSGSAPRDEDSESDKWIKHCVIEMPSSCSVAWVGDHGRDC GCSDEGSIRCVRRHVLESRENLKRIFGEDKFRELGLCDMGEDIAQRWTDEEESLFYRV VYSNPPSLGKNFWHFLPRALPGKTSMELVSYYFNVFMLRKRAQQNRSEPLHVDSDDDE VPDEPSVTEDEDSAVESPAHDYYVNNPMSPESEDSFHEKVADSLSGLRDGPSQKPLGS NTDNPGGDADVQDESCTSFEDHNGAHGSNGVQCAEFHMMLPNAALDHYSDRGACM</aaseq>

Gene Sequence

<dnaseqindica>2..124#1237..1384#1454..1708#1792..2957#gtcacgatttgcccccaaattcgcgatccccccttcttctccggctcagattccggcgagccctcgcccccgacccccaaattggccgcggatccgagcccccctcgccgccggcttccgatcggtacaggtttcccctcccctcgctgtctcaatcggctcttagggttagggctagggtttgtgctggtcatggctgtgatctgatcctggtttgactcgattcgatctgggaggtgtcccaggctcgcgttatggttagtgttcttgccgattacgatgctattgtagccttccgaggtggtgccccccggggggtgttgctgacgtcgctgtttgaccggttgtccgctgccagggaatagtaagaaaaagcggggaagaagttagaaagagaggactgttattttaaattgactcatgctacagtctgctagtaaaaaaaaatgtaactgaataaataggaatttatgctattctgactgaatgttattttcctaagaatatgtggaatatggttttaatgatagaaataatgtagaatttatggaagtattagtcactgttgctagatggtggtgaaatgcatcaaaccaattagatgccaacacattatctatgcttgagaaagaaatttagcatctgcttagatcgtcgtagctagatagaaaattacatacacttgagggacatgattgtacctctttagtttgcatttagaatttgcgcacgtgaattcagtttatgtgaccattgatacatcccacagtggtaatacgaatagtttcaccattaagtagtcatctctttagattacctagtcatataagtgatgtgactacattcttagatccattatcattaggtcaaaatgataatcatggacagttttgttaaactgtacctggatcaaggcaaggagttaaacatatatgaagtagaagagcctttggcctttgttcctaacatatggatcatgatatgaaatgtttaacacagctaatgagcatggaatgtttcagtcgagtgttgagctactgcagtgtactatagtattgattgggaaacatttaatgatcctgtagtgcatcccgttaaaattctctgcattagcaccactgtgtgcttctcttttatgctttctacgtcaataataattcgcaagttagttggcagttttgaggttaacttattctttataaatatctaataattttcctttttattttttggcaggatagtatggtgttttcgcacaacaaaaattccaaccagtttgaccctctttcttatgttaacctgagtggactagatgctgacagtcaatctgtttcatttactgacatgaactcaagagatgctccttcaaattcacatgttacaggtaggccttccattctcggaagtaaagaagcttcctattttttggttttctcatttttatttgtttcagatgttggaaaggagaatatgttgaataacccagaggaatcaaagatagcaagcactggtctgaagcctggttctccaatttctcctgagaacttcagtttttcttctctcccaggcagcagttgtcatttgtctacgctggatcatggcaagcgacctctttctgatgtcaggccattccaggttgcttgtaagcgtccgaagcaaatagacgaaaatacctggtcaacgagcacgtttgagacatccttttcaggtttgtattttttcttgttaaaatatctgctgtgaataatacgcaagagatatgtatcagttgattatgattgttggtttcagatttagctgatgagaccagagagccagattacatctatcataatagtggtatctcagcctgcaatactagttccagcatcccttactctaatctcgagcaattaattggagaggagaacttatacttacctgattgggtgactactttccctggttatactggagatttttggccagcacctgtggctgatcaggttgatgacattgactctcctatccatgaccacctcccaagaaaagctgtggcaattggacctgaccaccaggcagacattccagaatggaggcctaggatttcgatgaccgtgccctacggttctggttcttgtgctgatctgtcatacagttctgtttccacttcagggtctgctcccagggatgaggacagtgaaagtgataagtggatcaagcactgtgtcattgaaatgccatcctcatgttctgttgcttgggttggagaccatggaagagattgtgggtgcagtgatgagggttccattagatgtgtaagacgacatgttttggaatccagagaaaacctcaaaagaatatttggagaggacaaatttcgtgagttaggtctttgtgatatgggagaagatattgctcagagatggacagatgaggaggaaagtctcttttatagagttgtttactctaatcctccttccttgggaaagaacttttggcattttctcccacgagctttgcctggtaaaactagcatggagcttgtcagctactatttcaatgtcttcatgcttcgtaagagggctcagcaaaacagatcggagccattgcacgtggacagtgatgatgatgaggttcctgatgagccttctgtaacagaggatgaggattctgcagttgagtccccagcacatgattattacgtgaacaatcccatgtccccagagtctgaagactccttccatgagaaggtagctgatagtttatctgggctcagagatggaccaagccagaagcctctgggatccaacacagataatcctggaggtgatgccgacgtccaagacgagtcatgcacatcatttgaggaccataatggagcgcatggatctaatggtgttcaatgtgctgagtttcacatgatgctgccaaatgctgctctagaccactacagtgaccgaggtgcgtgcatgtagcggatgccaggactcatgagcatataaacataggttattagatgttgacatcatgacagagcctctgaagatatggctgatgagggagataaagatgatttgtatattggggttgtcaattgtcaatgctttgttgagaatgttgtgatgaacagtatgacagcaatacaaataaagtggatggccttggcgtttgccaaatttcgaacgccgagatggttttgatctttgctgaagttttgaaatttgaggggactgcacagccaaaaaagttaaagaccaagtcaagagttctgcattgagaacagctgccttgccttgggaagtctgttcctcaaaatcctccaacctgtcgtctgtcttggtgatgctatggtcgccagaagactcgacgggagcgatctgtatagtggtcaagtagctcagtatttttcaaagccattttgtaaagtagcatttggggaccaaactgagcttttgtgcgacgtcgtcttatattcattcattgtgtactcgtcatcttttgctcgtatgtgtacaacctattgcattctgtagttggagttggagagcttctagttaacccttttactgcagaaaatgtcgtactcatatagttgtatcaattctgacctaaggcatttgagttgtaagcagtgaatagggtaagtgatctgaatgggagcattacagacaaggaaaacgaagaaaccagatataatttctgaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0425800, RefSeq:Os03g0425800