Os03g0426900

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0426900| Description = Similar to Heat shock protein 101| Version = NM_001056945.1 GI:115453618 GeneID:4333161| Length = 6848 bp| Definiti...")
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Gene Name

Os03g0426900

Description

Similar to Heat shock protein 101

Version

NM_001056945.1 GI:115453618 GeneID:4333161

Length

6848 bp

Definition

Oryza sativa Japonica Group Os03g0426900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18468164..18475011

Sequence Coding Region

18468505..18468753,18469013..18469231,18469376..18469613,18470784..18470979,18471058..18471112
,18471665..18471815,18472671..18472979,18473120..18473385,18473481..18474407
,18474556..18474882

Expression

GEO Profiles:Os03g0426900

Genome Context

<gbrowseImage1> name=NC_008396:18468164..18475011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18468164..18475011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcagcgccgccgctcgccgcggggctccggcccgccatggcggcggcacaggcgccggtcgtcgccgcggcgtggggcgtgggcgctaggaggggggcggccttgtcgtcgtcggctcggtgtagggcgcttcggttgtcgagaggaggaggaggagggcgagatgggtgggtgcctcctcccgtggtggggaggatgccgccgcggacgctctccgtcaggtgcgccgccagcaatgggaggattacacaacaagagttcactgagatggcatggcaatcgattgtttcgtcgcctgaagtagcgaaagagagtaaacaccagattgtggagactgaacatctgatgaaatcattgctggagcaaaggaatgggctcgcccgtcgaatcttttctaaagctggagttgataatacaaggcttcttgatgccacagagaagttcatccagcggcagcctaaggtgttgggtgaagatcctggttccatgttgggacgtgacttggaagctctgatacaaagagcacgagactttaaaaaagagtatggtgattcatttgtttcggttgagcatctggtccttggttttgcggaggataaacgatttggaagacagctgttcaaggatttccagattaccgtacagtccttgaaaactgccattgaatcaataagagggaaacaaaatgtgattgatcaagatcctgagggaaaatatgaagctttggacaagtatggcaaggacctcacagccatggcacgtcaggggaaacttgacccggttataggaagagatgatgaaattcgtagatgcattcaaattttatctcggagaacaaagaataatccagttttgattggtgaacctggtgtggggaaaactgctatagctgaagggcttgctcagaggatagtgcaaggagatgttccgcaagctctaacaaaccgcagactaattgcacttgacatgggtgctttgattgctggggcaaaatatcgtggggaatttgaggataggctgaaggctgtactcaaggaagtcacagattctgatggacaaaccattcttttcattgatgagattcacactgttgttggagcaggtgcaacaaatggtgccatggacgctggtaatcttctaaaaccgatgcttggtaggggagagctacgttgtatcggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcgtcgcttccaacaagtttatgttgatcaaccttcagttgaagatacaatctcaatactccgtggattacgggagagatatgaattgcaccatggggtacgcatatcagacagtgcacttgtggcagcagctcttctctcagaccgttacattagtggacgatttctgccggacaaagcaattgatttggttgatgagtcagctgccaaattgaaaatggagataacttccaagccaactgctctagatgagattgatcgtgctgtaataaagcttgaaatggaacgtctctcactaacaaacgatacagacaaagcatcaagggacagactatctcgaattgaagcagaactgtcactattgaaagaaaagcagaaggacctgactgagcagtgggagcgtgagaagtcggtgatgactaagattcaatctattaaagaagagattgatagggtcaatgtggagatccagcaggccgaacgtgagtatgatctcaatcgtgctgctgaactgaagtatggcagtctgaacgcattgcagcgccagcttcaaacaacagagaaagagctagatgaatatcaaagttctgggaaatccatgctaagagaagaggtcacccaagatgatattgcagaaatagtgagcaggtggactggtattccagtatctaaactaaagcaatctgatagggagaagttgctgtatctagaggaagaactgcacaagcgtgttgttgggcaggatcctgcagtcaaagcagtttctgaggctattcagagatccagggctggtttgtccgatccaaatcgccccattgccagtttcatgttcatgggccctacaggagttggcaaaacggaactagcaaaagcccttgctgcttttatgttcaacactgaggaagctgttgttaggattgacatgagtgaatacatggagaagcattctgtctcaagactgattggtgcaccaccaggctatgttgggtatgaagagggtggtcagcttacggaagctgttcgtcggaggccatattccattatcttgtttgatgagattgagaaagcccatggagatgtattcaatgttttccttcaaatattggacgatggaagggttactgactcgcagggcaggaaagtgagcttcaccaacagtatcattatcatgacatccaatgttggttcacagttcatactaaacatggatgaagaaggtgggtcaactgattcagcctatgagaatataaagaagagggtgatggatgctgcaagatctgttttccgtccggagttcatgaatcggattgatgagtacattgtcttcaagccacttgagagggaacagatcaacagcattgtcaaattacagcttgcaagagtacaaaaaagaattgccgatcgcaagatcaaactcgaagtgtcgcctggagcagtcgaattcctgggaagccttggttacgatccgaattacggtgccaggccagtgaagcgagtgattcaacagtatgtggagaacgagctggcgaagggtatcctgagaggtgatttcaaggacgaggacagcatcctggtagacacccaggtcaccgtgccatctaatggtcagctccctcagcaaaagctcgttttccacaaaatgagtgaagaatccgcaccagctgctgctgaagacgagaaatttttgccggctgtttga</cdnaseq>

Protein Sequence

<aaseq>MAAAPPLAAGLRPAMAAAQAPVVAAAWGVGARRGAALSSSARCR ALRLSRGGGGGRDGWVPPPVVGRMPPRTLSVRCAASNGRITQQEFTEMAWQSIVSSPE VAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNTRLLDATEKFIQRQPKVLGE DPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAEDKRFGRQLFKDFQITVQS LKTAIESIRGKQNVIDQDPEGKYEALDKYGKDLTAMARQGKLDPVIGRDDEIRRCIQI LSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRLIALDMGALIAGAKY RGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELR CIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERYELHHGVRISD SALVAAALLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDRAVIKLEME RLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKEEIDRVN VEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQDDIA EIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVSEAIQRSRAGLSDPN RPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY VGYEEGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTN SIIIMTSNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFK PLEREQINSIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQ QYVENELAKGILRGDFKDEDSILVDTQVTVPSNGQLPQQKLVFHKMSEESAPAAAEDE KFLPAV</aaseq>

Gene Sequence

<dnaseqindica>342..590#850..1068#1213..1450#2621..2816#2895..2949#3502..3652#4508..4816#4957..5222#5318..6244#6393..6719#gcatccatccacgccctcctcgttcccccctgaacctcccagaagctccctctcctccccgccgccgcgacgcccaccgccacctatttatacccgcaccccgcctcgccacctcaccgttctatcctcgcgctcgcctccgctccaatcccaatctccgatctcccgccgccgccgctgaagaactgaacaatctacttctagtatctcaagagaattctgaggtagccgccggttgttgttgttgcgtgttagccgccggttgttgttgttgcgtgtccgcagattcagtacggtatattattgttgttattattgttatatattagatcaagcctgccatggccgcagcgccgccgctcgccgcggggctccggcccgccatggcggcggcacaggcgccggtcgtcgccgcggcgtggggcgtgggcgctaggaggggggcggccttgtcgtcgtcggctcggtgtagggcgcttcggttgtcgagaggaggaggaggagggcgagatgggtgggtgcctcctcccgtggtggggaggatgccgccgcggacgctctccgtcaggtgcgccgccagcaatgggagggtaagatcctcttttggtctgcattttgttttattttttttgggtggtgggggggggggggtcggtgctgatccatccttacgctagagaaatattagtgatgacaattaaatatgttagcttggatccatatacaataccatattcttattgtacaccccacattgttctaggtagatcaagcgcaccacccagtagagtttcccattctatcccatttacctttctgtatcttattataattccttttggttgatagattacacaacaagagttcactgagatggcatggcaatcgattgtttcgtcgcctgaagtagcgaaagagagtaaacaccagattgtggagactgaacatctgatgaaatcattgctggagcaaaggaatgggctcgcccgtcgaatcttttctaaagctggagttgataatacaaggcttcttgatgccacagagaagttcatccagcggcagcctaaggtagtttgtcctaaacacgggcatccatgatttttttttagaaaacattgaatatccgaacattctttcagtactctacacaatagttgttttatgatcaatttttttcaaggcagttatctcatgctcttttcaatggttcaggtgttgggtgaagatcctggttccatgttgggacgtgacttggaagctctgatacaaagagcacgagactttaaaaaagagtatggtgattcatttgtttcggttgagcatctggtccttggttttgcggaggataaacgatttggaagacagctgttcaaggatttccagattaccgtacagtccttgaaaactgccattgaatcaataagagggaaacaaaatgtgattgatcaaggtacggggattctattgcatccaaatgacataaattgatttgttatgtgctgtatagctctgtaagcatgcctagatggtcatatcctcatcttcaatttattacaaatttacagatttaacatcaaatatatcaaagaactacagatataatatgaagtttcacaaaactacaaatttagtaagaaaattatcacaaaactataggtttagcatcaatttgattacaaaactacaacatttgcagcttttacataaaaaaaatgctaaggatttaaactctgaaatccgtagttttgtaataactttaatattaactttgtagttttatagtacttactcttaaatctgtagttttgcgataaatttgttgctaaatctgtaattttatgatacaatgtgttaaatcagtagttttgtgatagtttggtcaaagtatgtgtagttttgtgaagtttactctatattctctgcttgcatttgaagggacaaaatgtttctttcacacaaatacaatggataaaggattgctcttttactcagtatactattaggtttctttaatgtaaaaaaagccgtaagcaacctgcagtatttaaatgctcatttggtaaatcagcatttgttcagcatgtaaggaggttgtgtgtttttgttttgtaaataagggtagtataggagtataggtaataatgcatgaagttgttaattagagagatgcagtttggaacaaaagaaaggaagtgctgataatttttagaaaatatacttaacgaatatcttacaagataaagccataaaattcatgggtaatttgatctgtttgatatgtaacccattcgttatgtaagcagtatggttaaaggaacctttaaatggtcctttttgcactctagcatatcatttttacaacagcatgattgttgattaatagaagggtaagagatggagctctgctctcttttgtggaccaaatactgcagtatttttttttatagaagagattaacagaaaagaaaggtgaagagttgagatgttcttaccaagaatgcaggtgcttatagtaggcattgagtgttggatgattctctttttcatggtagtataaatatgcaatattttcttttctgattttccatatgcaatgtcatctgaaataatgatttcacagatcctgagggaaaatatgaagctttggacaagtatggcaaggacctcacagccatggcacgtcaggggaaacttgacccggttataggaagagatgatgaaattcgtagatgcattcaaattttatctcggagaacaaagaataatccagttttgattggtgaacctggtgtggggaaaactgctatagctgaagggtattaaaacagtctatttcacacagtagttcaccctgcagtctatcaagctctaacttgattttaaatttttcttaggcttgctcagaggatagtgcaaggagatgttccgcaagctctaacaaaccgcagagtaagtttactcattcatgtatttatgctatgcttttgatgtgcttaatatatacgtaatcttgttattgcttattccttatttcctcctgtaagtttttatatcatagcctcgtaaaaagttctatcgtaactggttttttatatattgctgtgattgttattctgtatttttccatggtttattccagtttatttgtagaataaccttccgcctgtaaacttttataatttatatcatagcctgctactataactggtttttatagtataactggtttttatattgcttattctgtaaatttccctggttactgaagcttttgtgttgaatagcctataaaatgatcacagtttcctagtactctctatataatcttgtgtttttgtttggatgtatagtattcgatgcactagttccttaattatgaattctcagcttagagctaatgtagggaagttcctatgttctgaaaagctcaaaagaacaagagcatcatgaagacccgatgttaattttgcttcccctaaattttcattttcttttgagcagctaattgcacttgacatgggtgctttgattgctggggcaaaatatcgtggggaatttgaggataggctgaaggctgtactcaaggaagtcacagattctgatggacaaaccattcttttcattgatgagattcacactgttgttggagcaggtaattagatgtagaatgttcagttatttgtttgacttactggaacatttttcctgtatacagattatttcatctgaatatcatttagaagttttggaagatgacatgcattattgaaagaatgaatacagttattagaccagcgaccggtacatcacaaagtggtttagctgtgcttagtttattactgcctgatatggcataaggtgatctatttgccaatgccactttatatggcatttgttctacctagagaacactcattacactaacttggaggcaattttttttttgaaattttaagatccaactcaatcttgcgttctctgtggaattgtagttttagtataaacttataaataaatcagtgcttatggaagaaaagagtacatataggctatgagccatgagatctgtccaaaggttttatatacctgaatgataggactacataaatttactcccacaatcgctgttctcacacaatattttctagaagttttgaaaagtgaactacataaatgtattttgagcaccccgtacatatgctggcacagctatccattttgtttcctttctctgtcacgataaacaattggtttctctgagatggaatgcaatcatagtaatttctttggccatggtcatatccatttcatcacaactttgaatgacatgaagttgagtagcagcttggttttaattctgttctaatttactgaaatttgcataaaataccaaggtttggctgttgggagccctttcatgtctgttctttctatgaatttactactcaagaatgtcagttgcttcctgactctattcagaaatttataagcattcatcttgttacaggtgcaacaaatggtgccatggacgctggtaatcttctaaaaccgatgcttggtaggggagagctacgttgtatcggtgccacaacccttgacgagtaccgcaaatatattgagaaggatcctgcattggagcgtcgcttccaacaagtttatgttgatcaaccttcagttgaagatacaatctcaatactccgtggattacgggagagatatgaattgcaccatggggtacgcatatcagacagtgcacttgtggcagcagctcttctctcagaccgttacattagtggacgatttctgccggacaaaggtgccttttctcccctccagttattttccgttttccctagaagctaataagatgatcaagcattatgaaggataactatttataatctctatcaagaacttttatggctcttcctaaccagtagctgtgtttctttacagcaattgatttggttgatgagtcagctgccaaattgaaaatggagataacttccaagccaactgctctagatgagattgatcgtgctgtaataaagcttgaaatggaacgtctctcactaacaaacgatacagacaaagcatcaagggacagactatctcgaattgaagcagaactgtcactattgaaagaaaagcagaaggacctgactgagcagtgggagcgtgagaagtcggtgatgactaagattcaatctattaaagaagaggtaaaatataactcccaatttagcagcttatattattatataacagcataattgcttttgtcagttatctcatttgcttttaactgctgcaacagattgatagggtcaatgtggagatccagcaggccgaacgtgagtatgatctcaatcgtgctgctgaactgaagtatggcagtctgaacgcattgcagcgccagcttcaaacaacagagaaagagctagatgaatatcaaagttctgggaaatccatgctaagagaagaggtcacccaagatgatattgcagaaatagtgagcaggtggactggtattccagtatctaaactaaagcaatctgatagggagaagttgctgtatctagaggaagaactgcacaagcgtgttgttgggcaggatcctgcagtcaaagcagtttctgaggctattcagagatccagggctggtttgtccgatccaaatcgccccattgccagtttcatgttcatgggccctacaggagttggcaaaacggaactagcaaaagcccttgctgcttttatgttcaacactgaggaagctgttgttaggattgacatgagtgaatacatggagaagcattctgtctcaagactgattggtgcaccaccaggctatgttgggtatgaagagggtggtcagcttacggaagctgttcgtcggaggccatattccattatcttgtttgatgagattgagaaagcccatggagatgtattcaatgttttccttcaaatattggacgatggaagggttactgactcgcagggcaggaaagtgagcttcaccaacagtatcattatcatgacatccaatgttggttcacagttcatactaaacatggatgaagaaggtgggtcaactgattcagcctatgagaatataaagaagagggtgatggatgctgcaagatctgttttccgtccggagttcatgaatcggattgatgagtacattgtcttcaagccacttgagagggaacagatcaacagcattgtcaaattacaggtaaagcttctttactttgctgaggtcaacttcacattcgcaagacaccgatgattattatgtgaattatgtatatacaacaatgtacaaactcaatggtaccttttcatatcttgattgaatttcttttgcttttcctgttatacagcttgcaagagtacaaaaaagaattgccgatcgcaagatcaaactcgaagtgtcgcctggagcagtcgaattcctgggaagccttggttacgatccgaattacggtgccaggccagtgaagcgagtgattcaacagtatgtggagaacgagctggcgaagggtatcctgagaggtgatttcaaggacgaggacagcatcctggtagacacccaggtcaccgtgccatctaatggtcagctccctcagcaaaagctcgttttccacaaaatgagtgaagaatccgcaccagctgctgctgaagacgagaaatttttgccggctgtttgatgggccgaacttttagcagatgaggaataaaatgtagatagaagattagcaaacttgagtggatagcatagtatacagacacaatttcccttgctagttcaacattacataagcacaaagtctgtgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0426900, RefSeq:Os03g0426900