Os03g0427000

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0427000| Description = Conserved hypothetical protein| Version = NM_001056946.1 GI:115453620 GeneID:4333162| Length = 4266 bp| Definition ...")
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Gene Name

Os03g0427000

Description

Conserved hypothetical protein

Version

NM_001056946.1 GI:115453620 GeneID:4333162

Length

4266 bp

Definition

Oryza sativa Japonica Group Os03g0427000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18476060..18480325

Sequence Coding Region

18478898..18479641

Expression

GEO Profiles:Os03g0427000

Genome Context

<gbrowseImage1> name=NC_008396:18476060..18480325 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18476060..18480325 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaaggggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgaggatgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctgtggaaggagttctgccacgccagggcgcccaggatgatgcaggacctgcactccggcggcagccacatcgtcgacggcaactggaaggcgctcgggaagctccttatccattgcgcggggtgcaccaagggtggcctgtttggtaacatacacgttcctgggcactttgttttcaggacccgcttctcaaggacctgcggaaagagcatcttgcctccgcagtgcaggacagatgtgttgtacgtctcggatccttgcgagcaccttgatcagggtgaggaaggtgatttggggtttttccgcggcatcttcaagtcctttgcttcttcaaaggtcaagaagatgctgattgagaagcaagcaaagttccatccaaaggaggtgtgtccttattgtaaagccaagctatggaacttgctgcaggcaaatatgatacccagaagtgcttccataaggttggatgcttatgacgattctgttgagtattatatatgccttaacggacacatccttggtttatgcactctgatgcctgtctctgattccgaggatgcaaaggagtag</cdnaseq>

Protein Sequence

<aaseq>MVLVVKQYRCTHSASCLCLKGHISEDALFLVFRHMNWNPRMIAL FSCVSKWFDDIAKRVLWKEFCHARAPRMMQDLHSGGSHIVDGNWKALGKLLIHCAGCT KGGLFGNIHVPGHFVFRTRFSRTCGKSILPPQCRTDVLYVSDPCEHLDQGEEGDLGFF RGIFKSFASSKVKKMLIEKQAKFHPKEVCPYCKAKLWNLLQANMIPRSASIRLDAYDD SVEYYICLNGHILGLCTLMPVSDSEDAKE</aaseq>

Gene Sequence

<dnaseqindica>685..1428#gggggcacacgctcggccggctcctcttctcatcctccacctctcccttcccttccgcctctacctccacctccacctcacctgcgcgcgccttccccccattgcctccgcctccgccccctcaaccggaggagctcccccggctgccgctccgtggcccgtgtcccgtggccgctctcctccccagccctgggtgggtcggcgtcggcggcgggggaactaaccggagatccacccggacccggagggaagggagggggatccctttgccctttggaggtatctcagcttgttttggattcctcttctttttcctccaagagtctagtgcaaatcactcccccctccccgttctatcgcggacggatttgttttgctttactttcttgcttgagcttgatgcgtgctactatatgtccttagtaatcctccgattaaattccatctactcatcatgtttacgatgtttcaagccacacgcacgacatattgattggttgattgatgctaggatagccccgttaattttcgtgagattgtatttttggactttcatggatgacagacggttaaccaagcatgcccgaaccatggaactttgactaatgcagggggggtgggttcaggggtggtggcgcggaggccagcgttgttgagtgcgagcggagctcggggtgagctgagatggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaaggggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgaggatgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctgtggaaggagttctgccacgccagggcgcccaggatgatgcaggacctgcactccggcggcagccacatcgtcgacggcaactggaaggcgctcgggaagctccttatccattgcgcggggtgcaccaagggtggcctgtttggtaacatacacgttcctgggcactttgttttcaggacccgcttctcaaggacctgcggaaagagcatcttgcctccgcagtgcaggacagatgtgttgtacgtctcggatccttgcgagcaccttgatcagggtgaggaaggtgatttggggtttttccgcggcatcttcaagtcctttgcttcttcaaaggtcaagaagatgctgattgagaagcaagcaaagttccatccaaaggaggtgtgtccttattgtaaagccaagctatggaacttgctgcaggcaaatatgatacccagaagtgcttccataaggttggatgcttatgacgattctgttgagtattatatatgccttaacggacacatccttggtttatgcactctgatgcctgtctctgattccgaggatgcaaaggagtagttatcaagacttgagtcaggtacctttttttttctcccttttgtacacatgtagtctactgtttacctatgtaaaataaaagttactcctactgtgtatttaacttgttcctttaggatgtaatgatgtacattcttatagagtcactaagcgttacttgattatgaaaacagagcaacgtccttttcgagagcaactgaaaacattttatggaaacagaagacttccttttcgaggaaatctaaaaacaccaaatcctaactgtgttcatgatgaaaatgttgtacttgggactagacaactaggtgactagtattcaatgtcacccatccttacctttacgagactagtattattgtgctggtcaagctgtccttagaaggcaaattgtactgcagttttcctacaattgtgctcttgcttgttagaacctgccatttattgacagggatgtttggtagctataactaaaagatgattcaatagtatgtacttgtggttgggtttgatcctaattaatttttgaattatgcagaggctaagttttggtagacaaccttttgttctttggacaatatgatgaaagactaaaagtagtagactgaactattctcaggaaaggctacgccatatgggtgctaagatggtcaggatcaagatactaattttggatgaactattggaatcactactgctgtatagtagaagactgatagtagtagataataaacatcttttgatcaccaagataaataagcttgttatgctaagtagataaattgtccaattgtaatgaattacatcgaatcggcattgaagtgttatttaatctgattgtagtgttcaatttatggtgcatcaaatagcttaaaacttttccatattgtgaattcattaagttaaagaatagctgggctcttgagcataccttgtgatggttgcttacatgtgtataggctgttagaatatacaacgttttgttttgtgaacacgcatgcttcaagattttagattatgttcccgtcaagaacaaagccaaaaagaaaaaaaaagcatgtgactgtaaaacttatttataaacatgagaaaattggctgcatgcatttatctttgtagatcatacatgcatttttttttgtaactttaatttatcaagctttattgaaaatgaaatttgagaggggatgcctgcccttatatatgtgttaattacttaattaatgaattaacaaaatggggatttcgaactgcaccagtctaattcaggatggggacttacggcttacattatttttttttactgtccgactaaaacactttaatttcgttcttttatggcaatatgatgttacatgggaaattcaacttatatgtatacgtttgatttatctcttggaaatgtttgtttgggatatactgcctcttatgttagcatcatgaggttccacagactaagtttggttacgcgctaaaccgaaacggaccaaacctgatttacatcttttatcttttaccatttatttacaaagtaacttgatatacaagataatgacacataatacacagaccgatttaaaaggtagtcttttttacaatattcctacaggaggataaactatagcttccttctcgtatatattttggcactcactatcaactataacataccaatgatgttatgctaggatattacagaagtggttcatatggttcctgcaggttttttttttccttgtgagatgattgtcataattctatcgtgtaaaagcttaagcagttccaagagaaacttaatagtagatgaattctgtcttgtgataaatataaggaaaaaactgagtttttgtccacagagaaatatctctatatatacattttttataagaaaagtttattccacctgttcagtttggcctagaattcctatatggcattggggactgtctacccttttttttattggaacaatttcccaacttccatgttgaattgatgtcctgacaaaaaaaaaaaaatggggggggggggggggggctgttcatattgtaaccaaaataaaccttaccaaatttaggcaggatttcttatgtatttatcaaagtttggtaagaaactaaatggatgcacatatttagcaactttatcaaaaaatggtatggtttgaaattgcattaatctgaacaagccctaaataaaaggactaacaggacagtaccaaaaaacaaagccttaagcttttttacttgtgttttagagaactgtactgttgttcttctcagtgtaatttgatagttccatggcattgttatcgttggatgttagtgttggcaggaagcaaacgttgccgattacaaatgcattaactctgaagaaaaaaattatactgtagagaatagtccaatgaactggatgcagcgaaactgtaaatagtccaaggaacactagacattctcttagttttcatgtttctgtagaatgaaaagcttatgtaatgtgtttctaatgtgttctggtctttcttgctgacaggtggccttattcatgactggtctgtgaatcttgtacaatgttggatcttgctttctactaagaatcagtagctcgataagaaaatgttgtttttcttggtgcatgtacaatgtgggatctttctttcaactaatagccagcagcgtaacaagaaacgttgccgttgtattatctgcattgttctttgtaccaatagaacattagaaggctctatgtcaccacttccttttttatgggtacctcattacaggtatcttgtattgtatctacatgttttacattatctgacatggcatgtagcattaaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0427000, RefSeq:Os03g0427000