Os03g0430400

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0430400| Description = Similar to Nuclear protein 5qNCA| Version = NM_001056958.1 GI:115453644 GeneID:4333174| Length = 2497 bp| Definitio...")
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Gene Name

Os03g0430400

Description

Similar to Nuclear protein 5qNCA

Version

NM_001056958.1 GI:115453644 GeneID:4333174

Length

2497 bp

Definition

Oryza sativa Japonica Group Os03g0430400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18675065..18677561

Sequence Coding Region

18675067..18675399,18675597..18675804,18675903..18676249,18676338..18676410,18676513..18676598
,18676767..18676886,18676985..18677049,18677144..18677294

Expression

GEO Profiles:Os03g0430400

Genome Context

<gbrowseImage1> name=NC_008396:18675065..18677561 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18675065..18677561 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtggaaattaacatacacatgttctttatggggtatatgagaggtagaagacatccgatgaccttttggcctgagatgcttaagctaaaagattggccaccatctagtatgtttgaccagaggttacctcgccatggtgctgagtttataactgcattgccatttcccgagtatactgatccacgatatggcccgctaaatcttgctgtcaggcttcctgctggtgtactgaagcctgatcttgggccaaaaacttatattgcttatggatgttatgaagagttaggcaggggtgactctgtgaccaagcttcattgcgacatgtctgatgcggtaaatatcttgatgcacacagctgaagtgtcctatgacactgaacagcttgacaagatagcaaaaattaaaatgaaaatgagagaacaagatcttcatgaactgtttggggtttcagaatcaggcgccaagggtaaagctgatgatgaagcatcgaaaatctcatgtaacatggaaaacaaacacacctctaaccaaagtactaagggtttggacattaatgctttaccacctgatgattctggaagtgatattggggataaaccatcattttgtcaatctgaggtagaaagtgaattaacacaatgttcaaaacacaatcacgaggttaatagttctgtcaagatgcatgctggagctcattgtacttcagacaaccaaggatacattgacaggagtggattcaaacgcaaagattcagactgttcagaccaacagaaaactggtggcgctttgtgggatattttccgaagagaagattctgagaagttacaagattatcttcggaagcatgcctcagaatttcggcacatacactgcaatccagtgaaaaatgtttctcacccaattcatgaccagactttctatttaactgtggagcataagagaaagctcaaggaagaacacggtgttgaaccatggacattcgagcagaagctaggcgatgcagttttcattcctgctggatgtccacaccaagtgagaaatttaaagtcttgcatcaaggttgctctagactttgtttcccctgaaaatgttggtgagtgtgttaagctgaccggagagtttagacgtcttccatctgatcacagggctaaagaagataaactagagattaagaagattgctctcaatgctcttaaagaagtcgtaaatttcttagatcctttaccaaaagggtcaaagaacagggatgaagtggtagaagtgaccaaaccaaaaaggaaatacggtaaccgaagaggtgacctgaagagtggggaagaccaacccattgatgaatccatagaagaaaggaagcctaaaaagcgagggagatctaaacggtga</cdnaseq>

Protein Sequence

<aaseq>VEINIHMFFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPR HGAEFITALPFPEYTDPRYGPLNLAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVT KLHCDMSDAVNILMHTAEVSYDTEQLDKIAKIKMKMREQDLHELFGVSESGAKGKADD EASKISCNMENKHTSNQSTKGLDINALPPDDSGSDIGDKPSFCQSEVESELTQCSKHN HEVNSSVKMHAGAHCTSDNQGYIDRSGFKRKDSDCSDQQKTGGALWDIFRREDSEKLQ DYLRKHASEFRHIHCNPVKNVSHPIHDQTFYLTVEHKRKLKEEHGVEPWTFEQKLGDA VFIPAGCPHQVRNLKSCIKVALDFVSPENVGECVKLTGEFRRLPSDHRAKEDKLEIKK IALNALKEVVNFLDPLPKGSKNRDEVVEVTKPKRKYGNRRGDLKSGEDQPIDESIEER KPKKRGRSKR</aaseq>

Gene Sequence

<dnaseqindica>3..335#533..740#839..1185#1274..1346#1449..1534#1703..1822#1921..1985#2080..2230#aggtggaaattaacatacacatgttctttatggggtatatgagaggtagaagacatccgatgaccttttggcctgagatgcttaagctaaaagattggccaccatctagtatgtttgaccagaggttacctcgccatggtgctgagtttataactgcattgccatttcccgagtatactgatccacgatatggcccgctaaatcttgctgtcaggcttcctgctggtgtactgaagcctgatcttgggccaaaaacttatattgcttatggatgttatgaagagttaggcaggggtgactctgtgaccaagcttcattgcgacatgtctgatgcggtatgttattctataattggcatgatgatatttttttccccagattgttatagcttttacatcctgtccagaataaaaattgcattgccaggcctgcttaccataaattatttgttcttccccattatatattgattgggtttcactggcttctcatggtataaaggttaattacaaaaggtgtttggtttgaccaggtaaatatcttgatgcacacagctgaagtgtcctatgacactgaacagcttgacaagatagcaaaaattaaaatgaaaatgagagaacaagatcttcatgaactgtttggggtttcagaatcaggcgccaagggtaaagctgatgatgaagcatcgaaaatctcatgtaacatggaaaacaaacacacctctaaccaaagtactaagggtaaataataaaactttacttgttaaaatcaagagctggcaagaaattgaattgtttgtctggttatggtttactaatttcttttctgagtcatgcaggtttggacattaatgctttaccacctgatgattctggaagtgatattggggataaaccatcattttgtcaatctgaggtagaaagtgaattaacacaatgttcaaaacacaatcacgaggttaatagttctgtcaagatgcatgctggagctcattgtacttcagacaaccaaggatacattgacaggagtggattcaaacgcaaagattcagactgttcagaccaacagaaaactggtggcgctttgtgggatattttccgaagagaagattctgagaagttacaagattatcttcggaagcatgcctcagaatttcggcacatacactgcaatccagtgaaaaatgtacccttttttttgtccaatcacattatataggaatcctatatgttttattttcttattctgagcaatagctctgtacaatgtgcaggtttctcacccaattcatgaccagactttctatttaactgtggagcataagagaaagctcaaggaagaacacggttagataacattctattttgaagctgtcatctctcttccaaagctgtttataacactgatataatgttgtttttcttgtctgttggcatgcataattttaggtgttgaaccatggacattcgagcagaagctaggcgatgcagttttcattcctgctggatgtccacaccaagtgagaaatttaaaggtgcagctgaatacttccctctgtctcccccatcctgtggtatttgttgaaaatataaagttttggtggtatttattgataccacttttcccattaaatatttatgaatgcggcatcaagaatctgggctcagaaccagaaaactaagacccattctgatttgtgcagtcttgcatcaaggttgctctagactttgtttcccctgaaaatgttggtgagtgtgttaagctgaccggagagtttagacgtcttccatctgatcacagggctaaagaagataaactagaggttagagcgcatgtattcagctatctggtttgctcatgcggtgtaatgttctgtgataactacccttatgctgattgtgtttttttaacaaattgtagattaagaagattgctctcaatgctcttaaagaagtcgtaaatttcttagatcctttaccaaaagggtaagaaagactaacagatgatcttgtttttttgaagtttgtggatttagcattagctaaagtatttgggctactgttttgtgtgattgatcaggtcaaagaacagggatgaagtggtagaagtgaccaaaccaaaaaggaaatacggtaaccgaagaggtgacctgaagagtggggaagaccaacccattgatgaatccatagaagaaaggaagcctaaaaagcgagggagatctaaacggtgatctgaagattgaagatcctgtccaacaatgaaccagtagatgactagatgagaagcctaaaaaacaattaatgctcttttgattattcagaggcccaaatgattgggctgatatcgctctgggatagacttaagtttcgacagttcaagaatcacctcagacatcaccatggtgtcgattttgttcatatgtggggtgattgccttcactaaaatgatgtgattgtttgttgctgatagtggcaattgacttggaatagctttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0430400, RefSeq:Os03g0430400