Os03g0435300

From RiceWiki
Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0435300| Description = Armadillo-like helical domain containing protein| Version = NM_001056972.1 GI:115453672 GeneID:4333189| Length = 116...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0435300

Description

Armadillo-like helical domain containing protein

Version

NM_001056972.1 GI:115453672 GeneID:4333189

Length

1166 bp

Definition

Oryza sativa Japonica Group Os03g0435300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19003175..19004340

Sequence Coding Region

19003175..19004146,19004236..19004340

Expression

GEO Profiles:Os03g0435300

Genome Context

<gbrowseImage1> name=NC_008396:19003175..19004340 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19003175..19004340 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccgacgcgtcgacctccccgcgccggagtgacagcagcgactcttccacctgctccgacggcgatgacctcctgtcctcgtcgtcccccaagggcacggggatacaccgcctgccgccgctgccctgcgccaccgatggcgccatcgcggccctggtggaggagctcgagtcgcccgcgtcgtcgctggacgacctgcgccgcgccgccatggagctccgcctgctggccaagcacagcccggacaaccgcctccgcatcgtggccgcgggggccctgccgccgctggtggcgctgctgtcccggccggacccgctgctccaggagcacggcgtcaccgcgctgctcaacctgtcgctccgcgaggacaacaggggcgccgtcgtggacgccggcgcggtcggcccgctggtgcgcgcgctcaggtcggccgcgtccccggcggcgcgcgagaacgcggcctgcacgctgctccgcctggcgcagctggacgggtcagcggcggcggccatcgggcgcgcgggcgccgtgccggtgctggtgtcgctgctggagtcgggcggggcgcggggcaagaaggacgcggcgacggcgctgtacgcgctgtgcagcggggccccggaggagaacgggccccgcgcggtggaggccggggcggtgcgcgcgctgctggagctgatgggcgagccggagcgcgggatggtggagaaggcggcgtacgtgctgcacgcgctggtgggcaccgcggaggggcgcgcggcggccgtggcggagggcggcgtccccgtgctggtggagatggtggagggcggcaccccccggcacaaggagatggccacgctgtgcctcctccacgtctgcgaggacaacgccgcctaccgcaccatggtcgcgcgcgagggcgccatcccgccgctcgtcgcgctctcccactcatccgacgcgcgaccaaagctcagagccaaggcagaggtgttggtcgggttgctgcggcagccgaggagcgggagcctgttgcgggcgcggccgtcggtggcggcttcaaggttgccggccggtctctgtaattag</cdnaseq>

Protein Sequence

<aaseq>MESDASTSPRRSDSSDSSTCSDGDDLLSSSSPKGTGIHRLPPLP CATDGAIAALVEELESPASSLDDLRRAAMELRLLAKHSPDNRLRIVAAGALPPLVALL SRPDPLLQEHGVTALLNLSLREDNRGAVVDAGAVGPLVRALRSAASPAARENAACTLL RLAQLDGSAAAAIGRAGAVPVLVSLLESGGARGKKDAATALYALCSGAPEENGPRAVE AGAVRALLELMGEPERGMVEKAAYVLHALVGTAEGRAAAVAEGGVPVLVEMVEGGTPR HKEMATLCLLHVCEDNAAYRTMVAREGAIPPLVALSHSSDARPKLRAKAEVLVGLLRQ PRSGSLLRARPSVAASRLPAGLCN</aaseq>

Gene Sequence

<dnaseqindica>1..972#1062..1166#atggagtccgacgcgtcgacctccccgcgccggagtgacagcagcgactcttccacctgctccgacggcgatgacctcctgtcctcgtcgtcccccaagggcacggggatacaccgcctgccgccgctgccctgcgccaccgatggcgccatcgcggccctggtggaggagctcgagtcgcccgcgtcgtcgctggacgacctgcgccgcgccgccatggagctccgcctgctggccaagcacagcccggacaaccgcctccgcatcgtggccgcgggggccctgccgccgctggtggcgctgctgtcccggccggacccgctgctccaggagcacggcgtcaccgcgctgctcaacctgtcgctccgcgaggacaacaggggcgccgtcgtggacgccggcgcggtcggcccgctggtgcgcgcgctcaggtcggccgcgtccccggcggcgcgcgagaacgcggcctgcacgctgctccgcctggcgcagctggacgggtcagcggcggcggccatcgggcgcgcgggcgccgtgccggtgctggtgtcgctgctggagtcgggcggggcgcggggcaagaaggacgcggcgacggcgctgtacgcgctgtgcagcggggccccggaggagaacgggccccgcgcggtggaggccggggcggtgcgcgcgctgctggagctgatgggcgagccggagcgcgggatggtggagaaggcggcgtacgtgctgcacgcgctggtgggcaccgcggaggggcgcgcggcggccgtggcggagggcggcgtccccgtgctggtggagatggtggagggcggcaccccccggcacaaggagatggccacgctgtgcctcctccacgtctgcgaggacaacgccgcctaccgcaccatggtcgcgcgcgagggcgccatcccgccgctcgtcgcgctctcccactcatccgacgcgcgaccaaagctcagagccaaggtacgttacgtactacgtactccatcatcaattcgtcatgtcatgtgtgttcgtttctcatggaatggtggattttttttttttggcaggcagaggtgttggtcgggttgctgcggcagccgaggagcgggagcctgttgcgggcgcggccgtcggtggcggcttcaaggttgccggccggtctctgtaattag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0435300, RefSeq:Os03g0435300