Os03g0436300

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0436300| Description = Calmodulin binding protein-like family protein| Version = NM_001056974.2 GI:297601150 GeneID:4333192| Length = 4220 ...")
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Gene Name

Os03g0436300

Description

Calmodulin binding protein-like family protein

Version

NM_001056974.2 GI:297601150 GeneID:4333192

Length

4220 bp

Definition

Oryza sativa Japonica Group Os03g0436300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19033078..19037297

Sequence Coding Region

19033078..19033226,19033336..19033411,19033911..19033963,19034085..19034575,19034853..19035013
,19036395..19036595,19036710..19037297

Expression

GEO Profiles:Os03g0436300

Genome Context

<gbrowseImage1> name=NC_008396:19033078..19037297 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19033078..19037297 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcagaagcggcagccggaggagagcagcggcggcgtcggcggaggcatgggaccccccgtcccggccgaatccggggccgggagttcctcgccgccccaccgccgcggggagcccaagcgccagagggtccccgccctccgcgaggtgatcacggaggtgatgcggaagagcagcatcgaaaagttgttcacggctatcgagcccctcatccgaagagtggtgaaagaagaaatcgagtcagcgtttgcaaatcatgccactatgatggcaagaactgtcatggatgttgttccatcttcatcgaaaaatttccagctacagttcatgactaagctttcacttccaattttcactggctccaagattgaaggggagagctccttaagtataactattgctctagttgacactgttaccagagaagttgtagcatcaggcgatgagtccctgatgaaagttgaaatagtagttttagagggggattttgaaggtggagaaggcgatgactggacagctcaagagttcaacaataacattattagagcaagggaaggtaaacgacccttgctttctggagacatttttgttggccttattaaaggcattggtgcagtgggggaactatcattcacagataattccagttggacacgcagccgtaagttcaggctaggtgcaaaaactgaggatggttcttataacggagtaagggtgcgtgaagcaaagtctgaatcatttgtggtgaaggatcatcgtggagaattatacaagaagcaccatccccctattcttgatgatgaggtttggcgcctggagaagattggcaaggagggagcatttcacaagcgtttgaatagggagaaaattgttactgtaaaagaattcctcactttactacatcttgatgctcctaggcttcgaaagatattgggcagtggcatgtcaacaaagatgtgggaggtcacagttgagcattcaaaaacctgtattctccctgacaaggtgcatttgtactatccagacagcctaagcaaaacagcagtcgtgttcaatgttgttggagaagtgagagggttaatatctgagaagtttgtttgtgctgatgatcttagagaaaaggagaaggctgaagcatatgcagctgtgaagcaagcgtatgaaaattggaagaatgtcttcacctgtgacaatgaaacacttctggcaaatccttcacagctccttgatgtgagaactacgtcattgcatgaaaatgactatgaccagtttcctacacaagtttctaccgatggttttggtttgagccagtcaagcataccatcacctgacattttctcaattgatccctcgagtgcattggatccttgtccattggaaactgcagaaaacaatgaaaatcaatatcagtcagagttacccccacttggtggccatgcaccaccgcaagtatcacagacagtggacaagttctcaaattctttggtttatgaggattgcaccagtcacccctcattcagtgaagattactatcgttgttcagatccatctgtatcctttgacacacaagaccttggagctgcattgaaaggcttcattgcaacgatatctaagcccaaggcgtatagaggatggaggacattgtcttatgttataggatggatattctacaccaagaagattgttgctatgaaaagaaatgaacatgggaaataa</cdnaseq>

Protein Sequence

<aaseq>MSQKRQPEESSGGVGGGMGPPVPAESGAGSSSPPHRRGEPKRQR VPALREVITEVMRKSSIEKLFTAIEPLIRRVVKEEIESAFANHATMMARTVMDVVPSS SKNFQLQFMTKLSLPIFTGSKIEGESSLSITIALVDTVTREVVASGDESLMKVEIVVL EGDFEGGEGDDWTAQEFNNNIIRAREGKRPLLSGDIFVGLIKGIGAVGELSFTDNSSW TRSRKFRLGAKTEDGSYNGVRVREAKSESFVVKDHRGELYKKHHPPILDDEVWRLEKI GKEGAFHKRLNREKIVTVKEFLTLLHLDAPRLRKILGSGMSTKMWEVTVEHSKTCILP DKVHLYYPDSLSKTAVVFNVVGEVRGLISEKFVCADDLREKEKAEAYAAVKQAYENWK NVFTCDNETLLANPSQLLDVRTTSLHENDYDQFPTQVSTDGFGLSQSSIPSPDIFSID PSSALDPCPLETAENNENQYQSELPPLGGHAPPQVSQTVDKFSNSLVYEDCTSHPSFS EDYYRCSDPSVSFDTQDLGAALKGFIATISKPKAYRGWRTLSYVIGWIFYTKKIVAMK RNEHGK</aaseq>

Gene Sequence

<dnaseqindica>1..149#259..334#834..886#1008..1498#1776..1936#3318..3518#3633..4220#atgtcgcagaagcggcagccggaggagagcagcggcggcgtcggcggaggcatgggaccccccgtcccggccgaatccggggccgggagttcctcgccgccccaccgccgcggggagcccaagcgccagagggtccccgccctccgcgagtatgccccccctttccgttctcttgagagctcgattggaacccccatggttgtgtttgtgtggctggttatctgatttggtgtcagtggtggctttgcctccgcgcagggtgatcacggaggtgatgcggaagagcagcatcgaaaagttgttcacggctatcgagcccctcatccgaagagtggtgaggcagcctatggaacctacttattttttccatttctcacccatgtgtcatgaattcatggaagttatgcctttcgagtacatgtttgatctgtatcccctttcattctgttggggttagggttatcttttgttgctaacatggcttttatattgatcattcataattctattccaagtttcatctgtatttggtgcagctagcatgattagatctgttttgaacttgtgaattacacaaaccctacttgtagttcccaacttaatgtgaggaaccctgtaaatccataaattgaaacctagcaagcatttaagccatggaagacaaatcattaattcctgacctctagtttttggactcatttgtttctatctagaagatagtattttcactcaaagctgttgaaagtttatcctaagtaggattttcttcagccatgtgttatttttggctgtccaatgatggtcttgatgttctacccaattataatttctaggtgaaagaagaaatcgagtcagcgtttgcaaatcatgccactatgatggcaaggtacgacattgtaacacagtcttaactaccaatttgacaagtatcagtcactgtatagattcataaagttaatgcagctttctttagtttaacaacttgttttttttatttttcccattagaactgtcatggatgttgttccatcttcatcgaaaaatttccagctacagttcatgactaagctttcacttccaattttcactggctccaagattgaaggggagagctccttaagtataactattgctctagttgacactgttaccagagaagttgtagcatcaggcgatgagtccctgatgaaagttgaaatagtagttttagagggggattttgaaggtggagaaggcgatgactggacagctcaagagttcaacaataacattattagagcaagggaaggtaaacgacccttgctttctggagacatttttgttggccttattaaaggcattggtgcagtgggggaactatcattcacagataattccagttggacacgcagccgtaagttcaggctaggtgcaaaaactgaggatggttcttataacggagtaagggtgcgtgaagcaaagtctgaatcatttgtggtgaaggatcatcgtggagaatgtgagtttgcttatcaaatttcaattattcttttagttccctgactagtgctagtttcctgatccatttggcagagttgtccctttattttataattgcacatttatcaatatggaaattccttcttttagcacatatttatcatagacagataattctcttttactactatttaaaatgattgccctgtgccatttttatttttcattgtcataaatgtaaaaaggcggtcaaatttcaactcatcttttggaattattttattcatttttcctagtatacaagaagcaccatccccctattcttgatgatgaggtttggcgcctggagaagattggcaaggagggagcatttcacaagcgtttgaatagggagaaaattgttactgtaaaagaattcctcactttactacatcttgatgctcctaggcttcgaaaggtactatactatactgatctttggatgcacttctccatttgttcaaagataaaagaatctttctatgtttgtattttgcattctttttttgagtttacacaatctgcctattgttgcaattctttctatcgaatatttacatataatgtactgatgtacatcaaactagaaaatcatcagcacgtattggcgtgcttcaaaatttatagccgtgacatgatcaaaataattttgcaagtatttacataattaatttaattattgtaaaatcccaacaatatttgaaaataaccctataatacgctctttaattttgtttttatcaaagtttgagagttgaagtacaatagtaatatatgccttattatgttacctacttgttatttaaaaatgcatgttcagtaagaaattaccagctttcataaattggaaaattttgtttgtgagctgttggattttcaataattatcataatcaatcgaccatatctagcatcggaaatcgtcagagcgatacagtgcaactgatatccgttgggtgctttctttttcttttacattttgattttgagtttggttctctattttttatatatattttgatttccagttgtgttctctcttttttttgggagcttcaattttagagatctgtttttttacattttgattttccattgttttctctatttattttttgagctccagtttcaaaaacccgctcaaaagcatctgggctctagacttgaattgttgattgtttttctcaaaagaaagtcttggccctattatttcttttgacagctattttttttccactataacatgtaattatttattttccaatttatggtatttctcctagtttttcctaaattttgtgtagttttgtgtttctctgtgtcatgtttattctaggggtaataacttttgagatcatccgaaggattgaggtgttcttaatttaatttattgactatacttctatgagcttggaagtatctagaggattgtaaccaggaaagcagagcgtagctagctggctagctgtaggctgcatcttctctttgttccacgtgtcagcattttgtaggtccatgtggactaatcaggtaggggaagactggccagcttgagaagttactgttatggttgtcagcattattttgttatgttgagaaatgtataaccatgaaactgtatgtttcttacatttgagtgaatctattgtttttctgtggtaaacatcgttatgctaatctaagctagttttttcctcagtaagcatatgtcatatttctatctttttgcctgaatttgtagatgatagtggccgttcagcaaaatgtgtggatatgtgaccttatgctcaaattatgcagatattgggcagtggcatgtcaacaaagatgtgggaggtcacagttgagcattcaaaaacctgtattctccctgacaaggtgcatttgtactatccagacagcctaagcaaaacagcagtcgtgttcaatgttgttggagaagtgagagggttaatatctgagaagtttgtttgtgctgatgatcttagagaaaaggagaaggtattcacaattttttattcgacttagttagttatagaaggttcttgtatatttccccttcaccagttaggatatggaccatcttttttttaccttaacttttgctctttataggctgaagcatatgcagctgtgaagcaagcgtatgaaaattggaagaatgtcttcacctgtgacaatgaaacacttctggcaaatccttcacagctccttgatgtgagaactacgtcattgcatgaaaatgactatgaccagtttcctacacaagtttctaccgatggttttggtttgagccagtcaagcataccatcacctgacattttctcaattgatccctcgagtgcattggatccttgtccattggaaactgcagaaaacaatgaaaatcaatatcagtcagagttacccccacttggtggccatgcaccaccgcaagtatcacagacagtggacaagttctcaaattctttggtttatgaggattgcaccagtcacccctcattcagtgaagattactatcgttgttcagatccatctgtatcctttgacacacaagaccttggagctgcattgaaaggcttcattgcaacgatatctaagcccaaggcgtatagaggatggaggacattgtcttatgttataggatggatattctacaccaagaagattgttgctatgaaaagaaatgaacatgggaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0436300, RefSeq:Os03g0436300