Os03g0438400

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0438400| Description = Conserved hypothetical protein| Version = NM_001186560.1 GI:297722250 GeneID:9269499| Length = 5184 bp| Definition ...")
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Gene Name

Os03g0438400

Description

Conserved hypothetical protein

Version

NM_001186560.1 GI:297722250 GeneID:9269499

Length

5184 bp

Definition

Oryza sativa Japonica Group Os03g0438400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19131768..19136951

Sequence Coding Region

19132080..19132328,19132630..19132755

Expression

GEO Profiles:Os03g0438400

Genome Context

<gbrowseImage1> name=NC_008396:19131768..19136951 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19131768..19136951 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaagaacgagaggtgcaagagcaagtgcctcaggttgcaggtgtcgaatcccagagtaaacgcgcgagcgcgagcttgacgccggcctcgtcgaaagcaacggcgggagcagcagctgtaggacgggccgcacggatccctgcaagccgtagtcgaggatctgcaaccacgaacaaggcaatggcaacaccgacagtggcaccaagttcacgagctaaagcctctaatccctctatgtccgtggaaatggtgatcatgtcggatggagaggaggatgaagaaaacagctttgacttgaacgatgagatgtcagttagcctaccttcttcaggaagcgcaagtgagggagatgatggagatgataagtag</cdnaseq>

Protein Sequence

<aaseq>MEEEREVQEQVPQVAGVESQSKRASASLTPASSKATAGAAAVGR AARIPASRSRGSATTNKAMATPTVAPSSRAKASNPSMSVEMVIMSDGEEDEENSFDLN DEMSVSLPSSGSASEGDDGDDK</aaseq>

Gene Sequence

<dnaseqindica>313..561#863..988#aatcgtcatccgccgtagtgctggctgtgctgcacacccggtcacccctcgcccgcaccgcacgacacaagggccaccgccgccgccacacttccccagccgccgccaaccgccacacatgcctagccgccgccggtcgcctcacttccctagccgctagggccgccgccaccgccgcagcactttcccagccgccgtcgtcgcacttccctcccagtcggcgccagccgcaagaaggtgcaggttgcagcctcggcctcgcagccgcaggtcccatcctctaccaacttcgagcctgcgactacgaatacgatggaggaagaacgagaggtgcaagagcaagtgcctcaggttgcaggtgtcgaatcccagagtaaacgcgcgagcgcgagcttgacgccggcctcgtcgaaagcaacggcgggagcagcagctgtaggacgggccgcacggatccctgcaagccgtagtcgaggatctgcaaccacgaacaaggcaatggcaacaccgacagtggcaccaagttcacgagctaaagcctctaatccctctatgtccgtggtgtgtatccaaattccctcttcagtcttcactttcgttgttttgttccaattatgctaggcttcttggctgtttgattttgatttttgaacaatgatatgctttgtcaagtactacacaacatggatctcctaaattgcagagtgatttgttaaagagatcatgccatgatgaattagactattgtgatggttgcttacttcagttacttgcttattattaatgaattagactattgtactcatgtaactcatctatgcgtgaactaataatcaattcatctatgtataaatttgtgcaggaaatggtgatcatgtcggatggagaggaggatgaagaaaacagctttgacttgaacgatgagatgtcagttagcctaccttcttcaggaagcgcaagtgagggagatgatggagatgataagtagggtcctaaacgaggtgcaaaaagggcaaagggaggtatttcactgtcacctatcaagtgcaaggtaacgagaggaaaacgggatagttgttggaaatatttcaaggtgatcaatgttccctcaaagaaggagaatgggaaaatggaatgtaaggccaactgcagattttgtcatcacagctatgcataccaccctgggggaaccaccaaagcattgaattgtcacctagataagtgcacgatttacctgaacaagcttgcaagggctaaagctcaaggtacacttgactttccttcatgtgatggttctatgcttgtccatcctagtgagtatgatcatgaccacacgaaacttctaattgctcgtatgataattcaacatgattacccatttaggattgttgagcataaaggttttaataccttgatgaagtggatgaatagtagctatgaattcattggtagaaagaccataaaaaatgaatgcatgaaggtttatgaatttgaaaaggaccaactcaaaaagagtcttagggaggctgagtctataagtttaactatggacatgtggacatctaatcaaaacattcagtatatgtgtttggtggctcattacatagatgttgattgggttttgcaatgtcgtgtcctaaactttattgaggtggatcagttgaatggaaaatagaagataaggtcatgacaataacccttgataatgcttgaaacaatgacacggctgttgctaatttgaagtctaagcttgctgctagaaagaatggacagtttgattcagactattcccatgttcgttgtgctgcccacatagtaaatttggtggttaatgatggcctgcaaccaattcaacctttgataaacaatcttaggaacactgtgaagtactttaagaggtctccagcccgtatgtacaaatttgtgggagtgtgcaacactttctctattaaagttggaagagggttgtgtctttgatgttaaaacaaggtggagttcaaccaatcgaatgctagagtcaggcattgagtatagaaatgcatttgattattatgctgaagtagacaactactatgagtggcaaccactataatttgaatggaatttgtttgagaaaattcagcccatcttgggaacaatggctagtgcaaccattgcattttcagggtcaacctaccccactgccaatgtcttctatccttacattgtaaaagttaaaatatcaatattagctgcacaaacacaagcacaagctaggcttgcagaagctgcaaagttaggacaacagactggattgtatgaacctgatcctaatgatgtatttttgctgaatatgactgatgcaatgatggacaaattcaataaatattgggagaacacaaacaatatcatggttattgctacagtccttgaccctaggttcaaaatgaggtacattacatggtgctttggtcaattatttgacaagacaaggtctgaaatagaggttgctgccataactaatgagttgggaaagctatacaacatgtatgaggcaatatgtcgccaaaagcaaggtgagaacagcccacacattgctcactctgcctcatcctcaagggatacaagaatgtcgttggtttcaattgttccaagtggactccagtcctttttggaatcaaatgctgcagaatcctcaaagtccgagttactcatatatttagatgaactaaatgtgcccatagatgatagcacattcaacgtgctgaatttttggaaggttgatgctcataggttttctgttgtgtctaacatggcaaagtgattcttggctgctccagctagtagtgtgtcgttagagtctacttttagcaatggaggaagaattcttgatgactattgttggtatttcttaacgacattattagaaatataattcccagcaatggcacagaaatactcctggtatattatggttacagagtttatccgcaagcgcacggatataccattgtagcatttcacctgagagtattctaagggtatcgtatttaatcccgtgggaagatcatggtagagagaacctgactaataatttatatgttagttgtaataattatagtctaagcaggggttaatataattcaagggtagagtgacacacaaccagggaactactcattctcatataaattatatgagagagctttgcttgagaatatacatacatcctagttatctgacatactagctaataccctctttccgttgccctgctggtactttgagaagccacccctgactgccgagttccttacgacagtccgtcatgaccatacaatcggggtaaatacggaggagtaccctccctaggaaattaacttaggactatatacacgcgcggaggaatacccgtactgagctgtcaccaacagcggcccacctctcatccgcagcatataaccccaaataatgatatcccgtagtctagacaccacgcctaaactaccagatactactctaatatcatcatcatgatatagagtaattgcataagcaaacattatacccgtaccaaagcatcttacaaaagagaagagaagagctactagagccatacccgaactcttttgaaggcttctggactccgatttatactctattcctattccactagcttgataacactaaactaaacttgagagaatatgagagagctttgcttgagatgtgtgagtgaagtgagaaagtgaagtccttatatagaggtaggtatgacggttgtggaaggggaattgtccgaagtgccctccaaccgtcattaggatgcaatcctggacgtccatgccgaaccctggcctcaacggtggagattggggtttggccgaaccctatggttcggctgaaccatgggctggcccaaaccagcccatcttcggttggcgacttattggacttcttctctttatagacttgtgaattttggcccaattgatcgtgtcaattctgatttcttggcccattcatgcataagtctgattctcgatatcgtccgattgatttatcgtttgatttgatgtcgattctcctccacttattgtttgttctctgcaaaaggttagtgaaacaaatactagtggaatattattattctaacatggatatgcattgcaagtataactagttctcctctattttggtaattttgacggccgaaactgatcgctaatgaccgtcaacaactatatgagttctttgaaggcagaaactgttcaggctttggtttgtgcatcaagttggataagagcctctcaaaatgataacagtgcacctattcttgtggtatgtaatgtaatataaagcttatttttacttttatttttgtcaagtctttgtataaattgcctattttggactgtttttacaagcagatggtggagatgatgatattgaaatagtggagttccctaattgtgtggtgtcaagcaactagtaagtagtaagtacaatttatatttaagttgactgagttcttttgctaattcagtgtcatattaatgattaacatatgtgtatttacttgcaggctacaactctagaagagacggcctgtttggttggagggagtttttaggagggattgggagtttagagggatgaggctattaagtgttttgtttggttgggagacatgggaattttggtgggatgaggatgaggaattgaggaaggaactccctccttttcaatacctgggtaggggcaggtaattgggagggaattcctcctttaatttttctaagcaaatctcagtcatccgtttttattaatgacttaatctccaactaaactccctatcaatttccatcacctctaccaaacaagatatttggattaaaaatcaaattctcatcttaatctcataatcaattccctcgtgtaaactcccaatccccttccctcgagttaccaaacaagccgagaagggatgggagtgggactatggagggagaaaggaagctgtcaagggctcagggctgcagcagctgctgctctaaactgcactccacttgtgttttgtgtttatgtgcaattgtcttggatgaaaatgatgaaccttgcaggctgcagctttactagttatgcatttatgttaaattttgatgtattgaactattgaagtatatattattgtactggactttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0438400, RefSeq:Os03g0438400