Os03g0439700

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0439700| Description = Protein of unknown function DUF1230 family protein| Version = NM_001056989.1 GI:115453706 GeneID:4333209| Length = 2...")
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Gene Name

Os03g0439700

Description

Protein of unknown function DUF1230 family protein

Version

NM_001056989.1 GI:115453706 GeneID:4333209

Length

2105 bp

Definition

Oryza sativa Japonica Group Os03g0439700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19211412..19213516

Sequence Coding Region

19211599..19211761,19211834..19211991,19212095..19212130,19212275..19212370,19212563..19212640
,19212852..19213004,19213192..19213446

Expression

GEO Profiles:Os03g0439700

Genome Context

<gbrowseImage1> name=NC_008396:19211412..19213516 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19211412..19213516 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgctccggctgaaggccgtcgccgtccatccggcggcgctccttgggcgaccgcgcagccatgacgcaccccagctcgtcggtcgcacgggcgcgtcgacgacgacggcgaggcggagggcggcgaggagcgccgtgacggtgacgatggcgctcaaggaggagccggaaggcagccgtagcggcttcgccggcggcgttccgagctgggaccccgggctggagatccaagtccctttcgagcaaagaccggtgaacgagtactccgccctcaaggatagcgtactctactcgtgggcagagctgagcccggggtcattcttcctgcgcctaggcagcctgtggctgatcaccttcacggtgctcgccgcgcccattgcagctgcaagtttcagtccaggaaaggatccactcaaattcgtgctagcagctgggattggaactctgctcctcgtctctttggtcgttctccggatttatctgggttggagctacgttggtgataggctgttgtcggcggttgtgccgtacgaagaaaccggatggtacgacggccaaatgtgggtcaagccaccagaggtattggctcgtgacaggctcttgggatcttacaaggtaaagccggtgattaacctgctgaagcagacgctggtgggcaccggcgctctgctggtcggcgcggtgtcgctgttcgcgttcgcggcccccgtcgaggacttcctgcactccgtgaacgcaccaccatccgctgcctcctccaagcccagtctcagaagggaggagctgctgcgtctgcccgtggaggtgaggcaagacgacgacctcgccgctgccgccgcggaggccgccgacggacggccggtctactgcagggaccgctactaccgggcgctcgccggcgggcagtactgcaagtgggacgacctgctcaactga</cdnaseq>

Protein Sequence

<aaseq>MLLRLKAVAVHPAALLGRPRSHDAPQLVGRTGASTTTARRRAAR SAVTVTMALKEEPEGSRSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAE LSPGSFFLRLGSLWLITFTVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRI YLGWSYVGDRLLSAVVPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVINLLKQTL VGTGALLVGAVSLFAFAAPVEDFLHSVNAPPSAASSKPSLRREELLRLPVEVRQDDDL AAAAAEAADGRPVYCRDRYYRALAGGQYCKWDDLLN</aaseq>

Gene Sequence

<dnaseqindica>1756..1918#1526..1683#1387..1422#1147..1242#877..954#513..665#71..325#atatacacaccgggccaccggccggtagggagttctcgcggttttgtcgttcgatcgatcgatcgtgtccatgctgctccggctgaaggccgtcgccgtccatccggcggcgctccttgggcgaccgcgcagccatgacgcaccccagctcgtcggtcgcacgggcgcgtcgacgacgacggcgaggcggagggcggcgaggagcgccgtgacggtgacgatggcgctcaaggaggagccggaaggcagccgtagcggcttcgccggcggcgttccgagctgggaccccgggctggagatccaagtccctttcgagcaaagaccggtactacttcacttgtattcagttaacgggataacatagtactgtgcttttgcaatcgattcagtagattgctgagcatagtacctacttcactatatatcagcaatcgattaaggattacaacctataaggatgagcagtggattaattagtagattgacctgttaatccggtgatggttgtgcaggtgaacgagtactccgccctcaaggatagcgtactctactcgtgggcagagctgagcccggggtcattcttcctgcgcctaggcagcctgtggctgatcaccttcacggtgctcgccgcgcccattgcagctgcaagtttcagtccaggaaaggtatgccaactcatcatcttcagatatgtactttcaccttcagaatagaaccccccccccccccctttttttttgactgcaagaatagaacacagttgtaacagaaaataaaacatcctaccaaaatgagatcatttgagtcaagatgatactgtgaccgtgtatctgtccttacaattaatactagtaacttggaaatttcgtcctgcaggatccactcaaattcgtgctagcagctgggattggaactctgctcctcgtctctttggtcgttctccggatttatctggtaagctcggcaaacgctttaagagaatcctggaacgttaacttgatgcctaactaattgacaaatagtacatatcccaggttacctctcatcagcttaaaaatgaaacgaaagcaggaaatggtcaagaaatttgaacaaacattccagaaggattaattagttttctgatcagtgctgataacgtaacagggttggagctacgttggtgataggctgttgtcggcggttgtgccgtacgaagaaaccggatggtacgacggccaaatgtgggtcaagccaccagaggtaaattactaaaggaaattaagcaaggattggatttgtttagaaaatatggaccctctgcattctttatctgtaccttcatgaaaacctgcaactgcaatgttcacattagcacatccctttctctttttataaatttttcaggtattggctcgtgacaggctcttgggatcttacaaggtactagcaatcgtctagttgttgttcagcgtgatctgggaatgcctcgccaacagtaaaaactacataagctgtaattgatatctaatgttgaattcttcaggtaaagccggtgattaacctgctgaagcagacgctggtgggcaccggcgctctgctggtcggcgcggtgtcgctgttcgcgttcgcggcccccgtcgaggacttcctgcactccgtgaacgcaccaccatccgctgcctcctccaagcccagtctcaggtgccttcccgcgcatttcacttatcgatcgtttgctgcgcccattttctcacctacgacctgcgcatgcagaagggaggagctgctgcgtctgcccgtggaggtgaggcaagacgacgacctcgccgctgccgccgcggaggccgccgacggacggccggtctactgcagggaccgctactaccgggcgctcgccggcgggcagtactgcaagtgggacgacctgctcaactgacaaaatacttctgtattacccaacggatacggtgtgcagtgtgtcctgaatcctgatatatgcagattggcatgcgaagcctccgcaactgtgtaatcggaacgaaattttgtgaccattggttgcgttaatgggacagatagataaatgcttaatttattggatgcttgatcgacgcaacatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0439700, RefSeq:Os03g0439700