Os03g0444900

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0444900| Description = Similar to WRKY transcription factor 30| Version = NM_001057001.1 GI:115453730 GeneID:4333225| Length = 1318 bp| De...")
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Gene Name

Os03g0444900

Description

Similar to WRKY transcription factor 30

Version

NM_001057001.1 GI:115453730 GeneID:4333225

Length

1318 bp

Definition

Oryza sativa Japonica Group Os03g0444900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19525218..19526535

Sequence Coding Region

19525223..19526070,19526148..19526270,19526387..19526535

Expression

GEO Profiles:Os03g0444900

Genome Context

<gbrowseImage1> name=NC_008396:19525218..19526535 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19525218..19526535 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaattaagctcaattttgatttctctgccacctttttatttacttatgctaaatatttgttgttacatttgccaataaagatatgtgaatgtattggcttacagatgttaccatgtttctttgcacaggggaactttgaaatgtcccatcaacaagccttggcacaagtaacagcagaagcagtccattctccgtacagtatgattaatcaatcagatttctcactcccgttctcgtcgacaacgacttcagtgttggcatcacaacatgtcaactcttctgccaatgtgtcatcaccacgagaaataccaactctgccatcccacacagataatagcaacattgaatcaactgaggtttcacatggattccaaactactgccctcactgaggataaacctgctgatgatggctacaactggcggaagtatggccagaaggcagttaagggtggggagtatccaaggagctattataaatgtacccatttaagctgtccagttaagaagaaagtggagcgctcatctgacggacagattactcaaatactttatagaggccagcataaccaccaacgaccaccaaaaagaaggtccaaagatggtggcgctttactaaatgaagcagatgtttcccctgagaaggaagatgcatcaactagatcagaacagggctcccaagattattctggaaaattcaaggcatcaaatgatggtggtccttcatcatccaggaggggagataggggtgagcaaatatcgggctcaagtgatagcaacgatcaaggcgaggaagaagtgaaggttgagggtagagctactagtgatggaaatgcgaacaaaagacatgtgccagctccagctcaaagaatcattgtgcaaacaactagtgaggttgatcttttggatgatggctaccgatggcgcaagtatggtcaaaaagtagtaaaagggaatcctcacccaagagccccatgctatcttggacccattaattattccaaaatgggcgatccattttatgccaccacgttccatcaaatgtctagtgccatgatgtctcactggaatgtgggtcttgtgttacaagtaatagatgtggatgaaactcagtggc</cdnaseq>

Protein Sequence

<aaseq>MAIKLNFDFSATFLFTYAKYLLLHLPIKICECIGLQMLPCFFAQ GNFEMSHQQALAQVTAEAVHSPYSMINQSDFSLPFSSTTTSVLASQHVNSSANVSSPR EIPTLPSHTDNSNIESTEVSHGFQTTALTEDKPADDGYNWRKYGQKAVKGGEYPRSYY KCTHLSCPVKKKVERSSDGQITQILYRGQHNHQRPPKRRSKDGGALLNEADVSPEKED ASTRSEQGSQDYSGKFKASNDGGPSSSRRGDRGEQISGSSDSNDQGEEEVKVEGRATS DGNANKRHVPAPAQRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPHPRAPCYLGPINY SKMGDPFYATTFHQMSSAMMSHWNVGLVLQVIDVDETQW</aaseq>

Gene Sequence

<dnaseqindica>6..853#931..1053#1170..1318#aagccatggcaattaagctcaattttgatttctctgccacctttttatttacttatgctaaatatttgttgttacatttgccaataaagatatgtgaatgtattggcttacagatgttaccatgtttctttgcacaggggaactttgaaatgtcccatcaacaagccttggcacaagtaacagcagaagcagtccattctccgtacagtatgattaatcaatcagatttctcactcccgttctcgtcgacaacgacttcagtgttggcatcacaacatgtcaactcttctgccaatgtgtcatcaccacgagaaataccaactctgccatcccacacagataatagcaacattgaatcaactgaggtttcacatggattccaaactactgccctcactgaggataaacctgctgatgatggctacaactggcggaagtatggccagaaggcagttaagggtggggagtatccaaggagctattataaatgtacccatttaagctgtccagttaagaagaaagtggagcgctcatctgacggacagattactcaaatactttatagaggccagcataaccaccaacgaccaccaaaaagaaggtccaaagatggtggcgctttactaaatgaagcagatgtttcccctgagaaggaagatgcatcaactagatcagaacagggctcccaagattattctggaaaattcaaggcatcaaatgatggtggtccttcatcatccaggaggggagataggggtgagcaaatatcgggctcaagtgatagcaacgatcaaggcgaggaagaagtgaaggttgagggtagagctactagtgatggaaatgcgaacaaaaggtggtctacaaaacatttttgttttacttggacattttctgagcttcaatatataaatgctagtttctattggacagacatgtgccagctccagctcaaagaatcattgtgcaaacaactagtgaggttgatcttttggatgatggctaccgatggcgcaagtatggtcaaaaagtagtaaaagggaatcctcacccaaggtaattctgttttttaaattgcacttacttgttcccgatgttctgccatgttttttcattatattggagcaactctgaatagctcaatgcaatcactttatttttttttggtacagagccccatgctatcttggacccattaattattccaaaatgggcgatccattttatgccaccacgttccatcaaatgtctagtgccatgatgtctcactggaatgtgggtcttgtgttacaagtaatagatgtggatgaaactcagtggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0444900, RefSeq:Os03g0444900