Os03g0448500

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0448500| Description = Similar to Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Matured fruit 60 kDa protein) (MF-60...")
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Gene Name

Os03g0448500

Description

Similar to Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Matured fruit 60 kDa protein) (MF-60)

Version

NM_001057005.1 GI:115453738 GeneID:4333229

Length

7439 bp

Definition

Oryza sativa Japonica Group Os03g0448500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19811082..19818520

Sequence Coding Region

19812453..19812488,19812605..19812664,19812817..19812925,19815355..19815356

Expression

GEO Profiles:Os03g0448500

Genome Context

<gbrowseImage1> name=NC_008396:19811082..19818520 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19811082..19818520 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctgttcaagaattcaaagatgggttcattcacaaggaggagttccagctagcactctttaggaacagcaacaagaagaaccttttcgctgatcggatatttgatctctttgatcttaagcgcaatggcattactgatttcggggagtttgttcaatccattgacatttttcacccggaaatgcctttggcagagaagattgcctag</cdnaseq>

Protein Sequence

<aaseq>AVQEFKDGFIHKEEFQLALFRNSNKKNLFADRIFDLFDLKRNGI TDFGEFVQSIDIFHPEMPLAEKIA</aaseq>

Gene Sequence

<dnaseqindica>1372..1407#1524..1583#1736..1844#4274..4275#acgccctcctcactctcgtctctccctctccctctctcgccgccgccgcctcgcgccatcgccaacgccgtccccgtcacctcgcgcctgcgccctcgtccccgcctccgcctcgcgtagccgtcgcggtcgccactccctgccaccacgcccttcatcgcccaatcgccgtccctgagcacgggcttcgaggcggacgcggagaaatcgaggaggcgaacgctccttcctcttcccctcttgtctctcctctgcctgcgaggagcgctgctttgccgccgtcatcgccgtcgtcaccttgccggtctagccgctcgctgccatcagagtggtcggatctgatggtggcgagcacgtggctgtcgattgtttggcggttgatggagccaccgttgtcctcccacaagccggtatcaccattttcgcgttgtagtggacaaggggctccacggtggcgacgagctcaaccttggcggattgagcgatggcgtcaacctcgccggcggcgccgagtaggctcacctcttctcctccccttgtttgatgttatcacatttttctaagaaagacttgtcacacattttccttctttctttttacagtaaatagaggcttgctggatctgatggcggcgaggtcgtggccgccagatccggtagcctggcggctaatggaggggctgttggtctggcggatggaggtgctcactctcctctccgtcgtgcattcacgtttaactggtgctgccgccaccaccatcgccggcacggcaaggcatccacctcctctgcaccatccccttcctcctcacacttctctgccagcctgaagcaccatcgccggcacggcaaggcatccacctcctctgcaccatccccttcctcctcacacttctctgccagcctgaagcaccccatgagtatggatccctcgatttggcgctagaccatgacgctgcctcaagccctcgccgatgagttcactgccaccgccaccactgcgcggccagacgacatgatgctcgtgaatcggatgcaacggcttggtaaggataaagatttgatctgttttgctagaaactgtttgcagttgtgtttattgttattcttttttttcatactgtgaaaccttaactgacgcataatgaggttgcttcaatttttagggttattgagcattttgaggttgctgcaatttttatggtttttttcagatctaattgttcattaaatggtctggtgcgcatgaaaacatggaaatatattcataattgttttttttgtgcagctcactaggataactgacatcggcagttcatgctagagcaggaacggatatacaggtactgaaaatactgattatcctgtgtgagctgttcaagaattcaaagatgggttcattcacaaggttaactctcttgaatttcacttttagttgaggccatatttttgacaaaagtggccatctggtattgaaattctgtttttttttggtcaattctgaactgccattttcttgaacaggaggagttccagctagcactctttaggaacagcaacaagaagaaccttttcgctgatcgggtcggtttgcctttttttcaatttctgtgtattctgctgtctcgcggcaaaagcttttgtgagctaattaagcacaattttatggtttcggttgaattatagaacaatttcagatgtgtgaaaaactgactgaatcttctcatttcaagcagatatttgatctctttgatcttaagcgcaatggcattactgatttcggggagtttgttcaatccattgacatttttcacccggaaatgcctttggcagagaagattgcctgtaagaaatacccttccacattgcatatggttaaagctgtcagaattaatgtggtgtatttactacttaattacaatcttcttttctcagtgtcttaagaaatagcttagtcgctacctgaaaacaatacttgctggtaatcaaggatttttaaaagatagaagcagaaataggtcagttagtcggtcagagtattctggcataagccaagaatcatctgcatcttttgtcatgatttgcttttcaacatcctggagttgtttgcactcaaactttgtcttctgttcatgtcattttaatcttcattttattcatatatcattcatgtgtttggcatctgacagtattccctcttgctgttactgcatttagattgtaagatctgagaggaacttgatacatcgaacgtgaagaggtatattgagttactaaacaatatccttaataattctttccgttgaacaccatggctgggttcaataaagcttctattatctaaaaaaatatggctaattagctatatttttgtagaaataacaaaacataatgtaatttccatgcatagctagccttcagtactgatggcgatgtacaccagttttcatagttacgtagtaaacataattcatatagattaaatttttctttttagatatatatcataaagtttaaaacataagaaataattattttcttgcactgttcatttgtaccagctattggtagacttaatgaacaattttgctgaagtaggatatgtatataattgagctcaaacatacaaaggaggaaaacatgaaataaaaacaaatttgtctaagtttgggcccttctgataatcacaacttgttattagtaaaactggaagcaacggataaaaaacttttatttggttttgcaagaagtaaacagaggtgactgttaatgcacctactggtggtggtcttcaattaggactgatgcatagtagttggtttccaaactagaacctgatctcaaggtgccctacaactcgccaacttcgcaagcttatcatcaagtagtactagcaggcttgtccttacatgacatgcaaatgaccacccatggaccttttgcttccgaaatttggttgcatatggatggaacaatcaaaatagatgtttttaatgttgtactccctccgtcccaaaaaaagacaaaccttgggtttccgtgtccaacgtttgactgtccgtcttatatgaatttttttataattagtatttttattgttgttagatgataaaacatgattaatactttatacgtgacttgtctttttaatttttttcataattttttcaaataagacggacggtcaaatgttggacacggaagcccagggtttgtctttttttgggacggagggagtatgtgcagatggtctagcaactaatctgtccccagtagttcacatatttcatctccattctgggtaatagttgcttgcaatctgctttattcctcctgtgaagtatttactgtcagcagcacaccatattttttgttgtcaactaataataatcttgtgtcacaagcaacataacctgctatagattttctggttataaatatcctatgaccagtataaaccaaacactataaagatttttctccatgaatattctggtctctcacatgcacattgtagcacttaattgttcatgactatttaacaactttgcaaatgaaatactcctggctggttcattaagttagaaatagacttttcgaatactcatcaaagaaatcaaatgcagttcatgtttagttagctaacatatcgatcactgatttaagtttagctctctgtatttagatgcgtgacactttcatgattgctattccctttattaaagttcttcatcctgtgaactactggtagctttgacttgggggctaggtccctgtttcaccctttgtgccacggtgacatttctgatacttaattgcattttcgactgattgccagaatggcatattaaaatttaagtgcaagtttcatcttgctaaagatttcctatagactgtcactattttttttgtcattagcaatttagcattgcaagatttcctataaattgtctttgttatttttgcttaaaaatactaacgagctatagatagattttcttgttggcttaaaagaactaatgagctaatgatattatgctatagggtcctactaatgatgtgaaaatgttattatcctgtatatgctgcatattattggtgtcaactatttactaataagtgattctggctgacaacaatgttcttttggacatttctgtgaatctttaagcatatgcatgcattctgaaatatgaacatccccttctgtttactttgggaaaaaaatccgtgcgcatctctttttttccctaaactgttccttcctattgcagaggctgcaggatttgtacctgttgagcccatttaaatactctagaggaaatactggagaagaaggtggaggaggccaccgaaaggaagtttgatagttgtgcaagagctcttttttggcttagtaggtaaactcacacatagcatataatgggctttagttcttctcttatggagttttgctacctacaaatttcaaccttgcatacctcttcatattaatagttatcttctctaacatcactagatgcatggattcactattgcaccgcaaagctttgcacaccttgtagaaactgcatgcatgatcattctgaagtcattgcagcattggatctctttagcaacctatgattggtcagggtccattgaatctaagtgtaccattttttttttgtcgaaaatgactgtttttccatcgcacttgtcctgcacaactatgattgtattgatactgaattcaccttacaaagatcaaaatatttgcttttagtgaagttgcatattatctgctcatttttcaggccaagtttagattagacaggctgaaatcaacttgatggcaagtctaaaatggttgttccaatgtgttattatgtgatactgccttggtgagctggtttgtctatgcataaagattttcctttttgtgtcacagtagtattaccacgtgtctatggatcactctgtaaatgtcagaataaaaccccacgtatactagcttggatataggcgtggtttcaatgcagttccaagaatccacataagttttatcatccatttccaaattattcatccacatttgcatttcaaattaatttacagtaacacaaatcaagatctgtgcttaaaaagttataattgtctttagtacctcatagctgttatattactctcatttctcctccattgcattacggagaaatatcttcattgtcatgattttggacatgtctttatgtttaaaatagcatctgttgtatgtgcttgtttaatttatactagcagtgctgttgtacatgaatgaccatatgtacattagaaaatatgaagttctttgtacttagtccttaccattgggttcgacaatatgttgtctgtacagtacctggcttgtattaacggcaaggctatgatatcctttatgtattgaaattaccatcctacatgttcatggctcctttttatttgcttattcctgtttataaaaaaagatgcaattctctctttacatttgttgacttttgatcaatcaaattatataggacgagttgtatacaggaggcgcaaaagggtgcgacccagagcaacaacattgtttatggaacagtttctatttgcattgtaataaacaatcttacatcttcacgacttgaaattctttagttgatggcctccaatctaaatagttcttaacatgttaccagttactgctttctacaaagttatatttctgaatggtgtttttcccagaattcagaatcttaaaatctgtgctactggaagagttattatttcagtttgtttaattaaaatcaacttcactgcaccacataggcacatgctatgaatctactagagtatgaccatgtagcatttgtccatggccttgaatttgttgatgatttttttttgtaagcattgaagttcttctgatggtctgatttgactactgccttaatttgctgagaggaaaaattctgaacggagattcaacaattcaatcagaggaaaaaaaatatcagcagacagttcttgaaatttcatcatctgcaccagttgtgagagaactctttagtcctattcttttgtgccttgaaagttcgcgtttctaaaatacaagtacttccttttgtgctattgatttgtaatatttggtgtcagtcgtacaatatctgactaggtcattatcatttacacaataatttttatggtcattaactgcagaatcgaaagaaagcagaaaccaacaattttgttctccaaggtttgatctatgatcacaaggggacaagttattattctcaagaggattgggtaagtgtctcgaaagtgattctcttgtagccaagcttgttaaacaaaaatcaaggcccaccttggcactaatggatcttacaagcttgataaacaaaaatcaaggcccaccttggcactaatggatctccatccccatcaaggcccacctcggcactaatggatctccatcccctgttatgtgtagtactgtatttctgatttcctaaagtggtcttggtgaaggttgatgattgctttcactagtctcgttgtttctctgtttactgaatcatactaagatatgactgacatttaatagttgaaataagcttaggcttttagacctttcttccattatgtgtattgtatgcattattaatgtattaatattaaattctttttatgataacatccatgtttagtgacacttaaaaaagaatcacggagaaatttaaccctactggatttcctcctatgtatcatgaccaaataacgaaccatatcctgtgccataaatatttctaatgaaaattaatatagtaaggataaaatttgtcatataatattaatagccctctttagaggacaattacatgcctacaattttcttttatgtacatgtttatggatttcttttgctgaggttgaggagaagaggattgagaagattgggaagatacataaaacgaggtgagccattagcgcatgattaattgagtattaactattttaaatttcaaaaatggattaatatgattttttaaagtaaactttcctatagaaaatatttcggaagcgtgcacgcggaaaacggaacaaacaaactcacaatgtgattgtgccgaaacgcagcctagatgaaatggctgtgttaatgattgtttgctcttgctatataggccccacggttccgactgcggaatattatacccatagatggtgctgaaatttggtggagcttttggtgaagaaaaagcaattggtggaggataagaagcagggagtgattccattgaatgtttgaaatgtttgctttcattttctgttttcagatttcctgaagcaagtttaaccatacatcacaaatgcctagcccttcgatggaaacatttttttaacagtttaaagtgcagctataccttttcatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0448500, RefSeq:Os03g0448500