Os03g0452300

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0452300| Description = Ribosomal protein S5, bacterial and chloroplast family protein| Version = NM_001057009.1 GI:115453746 GeneID:4333233|...")
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Gene Name

Os03g0452300

Description

Ribosomal protein S5, bacterial and chloroplast family protein

Version

NM_001057009.1 GI:115453746 GeneID:4333233

Length

4073 bp

Definition

Oryza sativa Japonica Group Os03g0452300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:20048960..20053032

Sequence Coding Region

20049220..20049469,20052248..20052978

Expression

GEO Profiles:Os03g0452300

Genome Context

<gbrowseImage1> name=NC_008396:20048960..20053032 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:20048960..20053032 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccacctcctccaccgcctccgccatggcggtggccgccacctcccctaccattgccactgcgccattctcgtctcttcctctccgccttcgcctccgccccaaacccctcctcttcacttctcgcctcctcctccccgtccccaagtcctcctcctgggttgaatccgtctcggaggaaggggaggaagaaggcgtggaggaggattccgaggaatccggtgccgcgggggaagacgatgacggggaggacaacgacgaaaagccgcggcctgagccggtggccgcctctgggttcgagttcgcgtcgccgccggagggctacgtggagccggccccgttcgacgagctgcccccggagtcgcccgaggacgtggcagcggcgtacgaagcgctctacgggccggcctttagcggcgagacggtcatgggcaacaacgtcttcgaggtcaaggtggtggatcccgtcgacatggaccgggagcagcgccctagcgacgagttcagcgagcgggtcgtgcaggtcaatcgcgtcaccaaggtcgtcaagggcgggaggcagttatccttccgtgcgatcgtcgtcgtcggcgacatgaagggccacgtcggtgtgggcgttggcaaggccaaggaggtcaccgaggccatcaccaaggccgccatgaacggccgtcgcaatctcgtcaccgtgccgctcaccaagtattcgaccttcccgcatagagcagatgcagactatggagcagccagggtcatgttgaggcctgcttgccctggatctggtgtaattgcaggtggagctgtgagggtcgtgctggagatggctggggttgaaaatgctctggggaaacagctgaggagcaagaaccccctcaacaatgcaagagctaccatcaaggcgacccaaatgatgaggcagttcaaggatgttgctgcagagcgcgggcttccaatggagcagctatggaaataa</cdnaseq>

Protein Sequence

<aaseq>MAATSSTASAMAVAATSPTIATAPFSSLPLRLRLRPKPLLFTSR LLLPVPKSSSWVESVSEEGEEEGVEEDSEESGAAGEDDDGEDNDEKPRPEPVAASGFE FASPPEGYVEPAPFDELPPESPEDVAAAYEALYGPAFSGETVMGNNVFEVKVVDPVDM DREQRPSDEFSERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEA ITKAAMNGRRNLVTVPLTKYSTFPHRADADYGAARVMLRPACPGSGVIAGGAVRVVLE MAGVENALGKQLRSKNPLNNARATIKATQMMRQFKDVAAERGLPMEQLWK</aaseq>

Gene Sequence

<dnaseqindica>3564..3813#55..785#gccgcacttcatccccccctcccctccctccctccgccggagcgccgtctcaaaatggccgccacctcctccaccgcctccgccatggcggtggccgccacctcccctaccattgccactgcgccattctcgtctcttcctctccgccttcgcctccgccccaaacccctcctcttcacttctcgcctcctcctccccgtccccaagtcctcctcctgggttgaatccgtctcggaggaaggggaggaagaaggcgtggaggaggattccgaggaatccggtgccgcgggggaagacgatgacggggaggacaacgacgaaaagccgcggcctgagccggtggccgcctctgggttcgagttcgcgtcgccgccggagggctacgtggagccggccccgttcgacgagctgcccccggagtcgcccgaggacgtggcagcggcgtacgaagcgctctacgggccggcctttagcggcgagacggtcatgggcaacaacgtcttcgaggtcaaggtggtggatcccgtcgacatggaccgggagcagcgccctagcgacgagttcagcgagcgggtcgtgcaggtcaatcgcgtcaccaaggtcgtcaagggcgggaggcagttatccttccgtgcgatcgtcgtcgtcggcgacatgaagggccacgtcggtgtgggcgttggcaaggccaaggaggtcaccgaggccatcaccaaggccgccatgaacggccgtcgcaatctcgtcaccgtgccgctcaccaagtattcgaccttcccgcataggtaggtgacatcccttgctttattcctaattttgcatacgaggttatcatgtggatgctcttatacccatcgacccactagtttcaacttaatgtgcaaacagccggccgactagtactaattaatactacaagaaatgagttccatggaaactaaaacataagatactgtaaggatcgtgatttgttaatgatattgtttattagttgttactactagtttttgtggttttagccagcacagcaatttgtaacctgatttgctattatgcccaaatggtgtattcttattttctgttttacacagaggcactgataatttgcacaacagttcatggttgatagtgaaattggtagtatgcatcttccctcgtgcaggcattgcactcctatgaacaaatattttgtagaagatatcaaaatcgaaagtacaaaagattcagacttaatcttgtgccacactgtcacctactccctccatccaaaaaaaattcaacctaggtgtggatgtgacccctccagattcgttgtactaggaggggtcacatccaattctaggttgagtacttgagtttttttgggacggagtacttatctgcattttcatggatatatgtattttgaatgctcctcctgtttgcatgagctaatgtgcaattatatttttcatcaaaatgtacctggattatcataaattgtggtgtcgtggtagatacctgacattgatggagtgattcttgacaaaggcatttgtagctcgtagtaagtgtgatcgagaacacattttcaactgcaagggttgttttatttaaattatgttaattgtactaaaattcaattcggactttaaagaataaagtgttgttaaaactcaggtgcatactagcgactctggtttttgaacattgatacgattgaatttttagcgaagtgctacaattgaatctggactgatgtgttctattctcatgctgattgtatggttacgtagttgtctgaaagctagttgataatcataaaacaccactctttagtctaggatttgcctctatctgaaagctaattgataaagtgctactctttaattggtctaaaatgtaccattttggactaaattcatttgacctttcatccttttctttattgacctgagctcaacttgttcttcctgtttttacttcttcctcgcctcttcctatgcccagtaaaagctgtaaagtctgagttaacagaggcataattcccaactaaataaccaagacttcaggtatgcttttacaatcattatggaaggcaagcagtgacaaaccggagagcacaggatctatttttactagctactccctccgtcccaaaatatggcaacttatagggttcaaattttgtcccaaaatatagcaacttctagcttctaaagtgcagctttcattatgtagtacccaaaaataccgatgtacccaccactgcctctgcctcgttttcttaccaaagcccaggacatattaatggagggttaatatggaggctatactctttttatccctctccttaatacctgtgcccaactctgaaagtcattatatttggatggagggaatatttcttttgctgaagaagacaggaacatctctgagagagtgtttaagtctagggacatactagagctggataactgagtatatggaaccagtaaacccacgagtggtgttttgcatcaggaaggcatggaccttgggaacaaggatcagtggcaaatccagggggcaaaaggaggtctggcctctcccagcatgttgcttccccagcctggcctggcgaaaccattagatctctaaagctctaatgcaacccgcgggatatttaccaattattttcgtaatcattgtcactcggcaagtcgacccccctcatatctaaatcctggcttctccactgacagggatgccaagctccttgtcagtggcagtgcagagtggattggatttgaggagagcatgcagaggggattagattgtgcatggaggtgaatatggaaatgaaaattcgaagtttgacacagccttgaggtctcttcttcctctctcctaccatttgtatttggtatgactgttttgcagaaggaagaatagaaaaataggaaatgcaagtgatattcaggttaagaagttgaaagaatggaaagggaaattcaatttagtccaatgtggcacttcttagaccaaaccaatcaaggagttgcattttttcaattagcttttgggattggcaaatcctagagtccccatctaaagcatatgatcagttatcccagttctattatggtgttttgttttgtgctatgagatgtctaattttgttactgacattaggcagatgacaaaccgctgatgtggcctgtactttttggatatggcaagacctttttaaaaatatcagaactttagttttgtatgttgtatccttttgtttggaaaataactcttcccaatctatttcttcctgcatttggctaataaacatgtgatgcttaaaagcttggccgtacatttaattgttctgatctttgaagattaataaaaaaaattctttggcggagcaattttataggtgttcttcctgtgatggtatcaataattggaatttctaacactcaaatcttgtgcatatgagcatatcgacaataattgtgcatctcctatctttctggcagttatgtctatctacaataattgcaattctgagtattatttcatcttggtttgtcctgcacaacaagcagagcagatgcagactatggagcagccagggtcatgttgaggcctgcttgccctggatctggtgtaattgcaggtggagctgtgagggtcgtgctggagatggctggggttgaaaatgctctggggaaacagctgaggagcaagaaccccctcaacaatgcaagagctaccatcaaggcgacccaaatgatgaggcagttcaaggatgttgctgcagagcgcgggcttccaatggagcagctatggaaataatcaaataaatcaaccttaaattccctccaatatttttctttctccatttcttgagttcattttcagttgtatctgtcagtggggataatcctacatttaagtcctctccccaccctaaatgcattatgtgtctccacatatacatggcaaagctttagatgaattgatctgcgaatacctttagcttcactagtaatagtgcatgtgcaagacacgttccgcacgtataaatgcgagtttattatgttttcccactatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0452300, RefSeq:Os03g0452300