Os09g0261100

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0261100| Description = Cyclin-like F-box domain containing protein| Version = NM_001069241.1 GI:115478221 GeneID:4346545| Length = 3785 bp|...")
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Gene Name

Os09g0261100

Description

Cyclin-like F-box domain containing protein

Version

NM_001069241.1 GI:115478221 GeneID:4346545

Length

3785 bp

Definition

Oryza sativa Japonica Group Os09g0261100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5068689..5072473

Sequence Coding Region

5068947..5068961,5071254..5072465

Expression

GEO Profiles:Os09g0261100

Genome Context

<gbrowseImage1> name=NC_008402:5068689..5072473 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:5068689..5072473 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggaaaccctccttccgccaccgacgacgacggtcgccgccctcaccgacgacaccctactcgacatcctccgccgcctcgcccccgccgacctcctccgcgccgccctcgtctgccaccgctggcgccgcgccgccgcacgctgcgtcatggccgcgcctcccccactcctcggctacttcttccaccccgccgacacgcccctcacggcgcacatcgtcgcgcccatcgccgccctccaccccgccgccttcgtccccctcgactcctcctccccctcctccccgcgcctctccctcgacgggaccaagggcttcaccatctacgacgtccacctcggcctcgtgctcctcctcccggcgtcgctcccctccggtgtcctcccccgcatcctcgtcctcgaccctgcctcccgccgccgcgcgctgctcccgcagcccccgcgcgacgcgctgccgggcgaccgctggcgtggccttcggcacataatcggcgccgccgtgctctcgcgctcccacccgagcaggctctgcttcgacgccgtctgcctcaccgtcgacgacgagaacccgcgcgcctgggtcgcctcctaccgcgacggcgagtgcagctggagggcgctcccgcaggacaccggagtcacggtcgcgttcgaccccttctggttcgagggccgctgcgtgcacgccgcgggggacatctactggcacatctgcaactccggccgcctgctcaagctcgaccctaccacgctctccttctcctacctgctggcgccgtccgagctgggggacaggaacaagaagtttcgaatcggggaggcgccggaggacgggaggctcggcatggcggccatggaggaccaggagatgcagttctgggtgcgcggggaggcaagcgggagcgacaacggctggttcctgcagaagaggatgaacatgcgcaaggtgttcgacaccgtgcccgggctgcccagggacaagttgagccggaccgtgtccatctggctcagcgacatcgacgcgggccgcacagggaagctattcttcgaaacagaggggtatgggcgctactccttccatatggacacaggcaagctggagcgcttggccactgaagatggaaaggagtatggccaccccatctatgcctacttcatggcctggcctcctgccttcctagctccagaaaaatctgaatttccgggtggtgaccactga</cdnaseq>

Protein Sequence

<aaseq>MASETLLPPPTTTVAALTDDTLLDILRRLAPADLLRAALVCHRW RRAAARCVMAAPPPLLGYFFHPADTPLTAHIVAPIAALHPAAFVPLDSSSPSSPRLSL DGTKGFTIYDVHLGLVLLLPASLPSGVLPRILVLDPASRRRALLPQPPRDALPGDRWR GLRHIIGAAVLSRSHPSRLCFDAVCLTVDDENPRAWVASYRDGECSWRALPQDTGVTV AFDPFWFEGRCVHAAGDIYWHICNSGRLLKLDPTTLSFSYLLAPSELGDRNKKFRIGE APEDGRLGMAAMEDQEMQFWVRGEASGSDNGWFLQKRMNMRKVFDTVPGLPRDKLSRT VSIWLSDIDAGRTGKLFFETEGYGRYSFHMDTGKLERLATEDGKEYGHPIYAYFMAWP PAFLAPEKSEFPGGDH</aaseq>

Gene Sequence

<dnaseqindica>3513..3527#9..1220#actcaccaatggcgtcggaaaccctccttccgccaccgacgacgacggtcgccgccctcaccgacgacaccctactcgacatcctccgccgcctcgcccccgccgacctcctccgcgccgccctcgtctgccaccgctggcgccgcgccgccgcacgctgcgtcatggccgcgcctcccccactcctcggctacttcttccaccccgccgacacgcccctcacggcgcacatcgtcgcgcccatcgccgccctccaccccgccgccttcgtccccctcgactcctcctccccctcctccccgcgcctctccctcgacgggaccaagggcttcaccatctacgacgtccacctcggcctcgtgctcctcctcccggcgtcgctcccctccggtgtcctcccccgcatcctcgtcctcgaccctgcctcccgccgccgcgcgctgctcccgcagcccccgcgcgacgcgctgccgggcgaccgctggcgtggccttcggcacataatcggcgccgccgtgctctcgcgctcccacccgagcaggctctgcttcgacgccgtctgcctcaccgtcgacgacgagaacccgcgcgcctgggtcgcctcctaccgcgacggcgagtgcagctggagggcgctcccgcaggacaccggagtcacggtcgcgttcgaccccttctggttcgagggccgctgcgtgcacgccgcgggggacatctactggcacatctgcaactccggccgcctgctcaagctcgaccctaccacgctctccttctcctacctgctggcgccgtccgagctgggggacaggaacaagaagtttcgaatcggggaggcgccggaggacgggaggctcggcatggcggccatggaggaccaggagatgcagttctgggtgcgcggggaggcaagcgggagcgacaacggctggttcctgcagaagaggatgaacatgcgcaaggtgttcgacaccgtgcccgggctgcccagggacaagttgagccggaccgtgtccatctggctcagcgacatcgacgcgggccgcacagggaagctattcttcgaaacagaggggtatgggcgctactccttccatatggacacaggcaagctggagcgcttggccactgaagatggaaaggagtatggccaccccatctatgcctacttcatggcctggcctcctgccttcctagctccagaaaaatctgaatttccggtaaatgcaaaaaccttcaccgatcttatcatttttgcttatgccgaattgcttgatcaatgcttgagtggattgcttctttatgtcgtttgttgcctgtctgttacatacttacatgtgcattaggttgataagatctagggtcagattctcagatgtatttctagataaggaagatgattacatccccggcctctgcattgaggatgcacatagcgagaatcacaagttttgtattacaatttgtaaggttgtagtgatcgacaaactagctgatcaagtgttgcaatcatgttgaaagccgtaaggtatcgtaagcaatctttgcaactagaattatgtcttagtgctgataaaactgctgttcttgaatcctgctgtttcgaagtaatttgagataatagatgcgtaggtaaaagagtatacttctgtccttttatttctctgggttcacacacatgtttatgatttttcctttgctcactatatatgatctatcctgatcattttgttcgtgccagttttgtgtatgtcatgtttcctttttccatttgtctattcgggcacctcaatagtatttgcattagctttggtatgctaatattgaactttgaagtcaaaagtttatccaattattttttttaatttataatgctgacttttttgtttatgaaatgttcaatttcgcgcttagtccgatcattcttctatgtgtttgcccttagtagcttggcatgcgcacgagctttattaggctatttaacttgagaaaagacgaattgcagatgtatatttattcattttaggatttgttatggagttactagccagttttagaacgttaaaattagcagactgcacggtaaatgatttgttatattagttccaagcacaaaccacaaaatgaagtttggtgattctagcattctacattttgtgcatcatatgagtatatgaccttcaattgcattggtaatatgagttatagttagggcacacttacaaatttttgctggtttatatttctttgaatcaataaatctatttagatttggattttgtttgagaagatgagttttctgctgactataggtactttattggcttttagaggttgtttcaatcttttagttttacaattagagtttgtttggtttatttcttgtttttttttttttttgagttttgtggagttaataggggctttgtttgctagtgggcagctttagcttattcccattgatacttattaccctaagagcttaaacatcagataatcaaaatgtaacaaattattgcattgcattgtccaacctgtatttttatcgccgtagttttgatgcataataatatgtgtgattctgtatctcatatgtgtgaaatatgtcaactagtagtactcaatctgttagtaagcacgtggtcgcaacttgtatgttggccatgctattacaacacacgcacaccttctattattcatgggattgtcatcttggattcttgatatataagatgagaagtatatgtgattgatatttatattttgacttatcataatgtttctcaataagttgaatgaaggatttcatgctagctatctgtaaataaattttaggaccgatgaccattaggaggcaaaccatttttgcccagcttttgtcccttttgtggagccccgtacagcaaattagtttagcaggtctttgaagtcacaaagagaatggtctacagagcccacaacttatttgactcttaccgagtcttaaatgttagctggttattgtggcattggttattacaggaatcagatttatctttgcaactgattaggaacaatgcaacactgtctagtattttgttaattcggtcaatttgaagataataaatatagaagaatatgatattatttgctgttatagacttttatatagcagttcaccactgttttacttgttgctcagtgctcaatcttcactgttaaaacaattgttggctgtcagtacaataacttcttttttgttctgggacgtcaaattttgcaattcgccctcgtttgatgctttctattttactactgaacttttacgttcttgtaagcttccgtcaagaaatggctcatgttacgccctcatatggaagcataataaattatagtcatgggcttaactaatgttcttttacatgttagtgtgatttatctcttgttatgtagtacttgcaaacaccctattcatttgattcatcgacagtactgggatctatactgatgattctgccgttcttgtgatttagggtggtgaccactgagactacgttatcatccagctcactcccttccatttctggatcaccaaaattccatgcctcgttcactcatcaatctactgagcatagtgggaagttatgagtagttttgttgttctgcatgagactatctaattcctatcagttctgttgcagtcattcaagcatacttttaactagattaagaaagtgggatgacattgcacattgtgctgggtaagtttggcaaattgtggtttgaaatctgatattattctaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0261100, RefSeq:Os09g0261100