Os03g0556900

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0556900| Description = Conserved hypothetical protein| Version = NM_001057016.1 GI:115453760 GeneID:4333241| Length = 3216 bp| Definition ...")
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Gene Name

Os03g0556900

Description

Conserved hypothetical protein

Version

NM_001057016.1 GI:115453760 GeneID:4333241

Length

3216 bp

Definition

Oryza sativa Japonica Group Os03g0556900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:20500586..20503801

Sequence Coding Region

20500586..20501332,20502572..20502621,20502921..20503200,20503448..20503565,20503743..20503801

Expression

GEO Profiles:Os03g0556900

Genome Context

<gbrowseImage1> name=NC_008396:20500586..20503801 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:20500586..20503801 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgagctcgatcccgggttcaccggcggtgaattggtggctcggttggagttgcggctgctgggtgctcaccgagatgctagacaaggctggggatgtctgcagattcacagcgacggcgaagctccatggcggcatggcacaactccagggatgacgtcggctgctcgatctattgatggcaacagcgacgatgtcgctgcggcggtgcgcagagcgcgctccaaagctccggtgtgcacagcagcgttcccgtcgattggctgcaccagagaggatgaaatcaaaagaagaaatattcggcatggtgaggagagtatggaacgcaagagaagaggaaacgaccgcggctcatcaacgattccggccatcgtcttattcgcagccggcgatggagaaacagtggagaagggcagcgaggatgctctccctcggatggatcggcactggaatgcttcaatacttaatgtgttgaccagattaactagtgttgattttactgagacccgcaaggggacacttgttcagaagtacaaaataaaagtggttggtgatgatcttgagaccagttcttctaaggatggagatggaaaacaagctccagatggctcggctcagctgagtaacaaaagtgctaccgacggctctctaggaaatcaaggtgacaattatcaaggggtccatggagtgcaaggtgacggggtgcatggagttcaaggtgatggtgcccaggggttgcaaggaggaaatcttaatcagaatagtgatgcggcacaagattttttcagtaatttccaagatcgggttgactacgttgtgcatcatgctttgatcaatcaatctggggtgttagtcaataccttatcaaacatgatgaagtcaatagccgatggttcaatagctgagcatcaggctgcaggcccggtttatttgcaaggaggtgtctttccaaattatcggtctttgattaccgatgttcagccatcaactcaggcggttccctccgttgcaccaacatctcagccgacggcactggcgtcaactcccctacctgttccgtcagcactggcgccaggccagccagtgaaccctcagttgttaataagagagcagccacagcatggcgggcaggttgcgaatcggctgacccaagatcaggttgctgccacgtttctaccacctcaacctattgttgatccaatacagcagcagccgattcaacagacgccgttaagacagcaaatcatttag</cdnaseq>

Protein Sequence

<aaseq>MAELDPGFTGGELVARLELRLLGAHRDARQGWGCLQIHSDGEAP WRHGTTPGMTSAARSIDGNSDDVAAAVRRARSKAPVCTAAFPSIGCTREDEIKRRNIR HGEESMERKRRGNDRGSSTIPAIVLFAAGDGETVEKGSEDALPRMDRHWNASILNVLT RLTSVDFTETRKGTLVQKYKIKVVGDDLETSSSKDGDGKQAPDGSAQLSNKSATDGSL GNQGDNYQGVHGVQGDGVHGVQGDGAQGLQGGNLNQNSDAAQDFFSNFQDRVDYVVHH ALINQSGVLVNTLSNMMKSIADGSIAEHQAAGPVYLQGGVFPNYRSLITDVQPSTQAV PSVAPTSQPTALASTPLPVPSALAPGQPVNPQLLIREQPQHGGQVANRLTQDQVAATF LPPQPIVDPIQQQPIQQTPLRQQII</aaseq>

Gene Sequence

<dnaseqindica>2470..3216#1181..1230#602..881#237..354#1..59#atggctgagctcgatcccgggttcaccggcggtgaattggtggctcggttggagttgcggttaaaatataaaattaagagcatgttcttgcgattccattcctctagttttcttggttaggggacatcggagtagcgccagcggcgagtccgagtagaggatgttttcgggtggtggtgcatgtgcttctaaaatcatgtattggttaattgggtgcatgcatgtatgttctataggctgctgggtgctcaccgagatgctagacaaggctggggatgtctgcagattcacagcgacggcgaagctccatggcggcatggcacaactccagggatgacgtcggctgctcgatctgtaaggggagtcaccaatacggtgcatacaagaggtcaaaggctatctagagaggccatgcatgcatggaatttgactgacgcccaccagagagaatggaatcgatgatggaagcggttgaacggagttggaaaacacgatgtcgacctccaagatcgctgcgccattggatgggtttcttgagggtaaatggagaggaggttgaggtgaagctggtggcgtggtggctcgctccggcttgatctagattgatggcaacagcgacgatgtcgctgcggcggtgcgcagagcgcgctccaaagctccggtgtgcacagcagcgttcccgtcgattggctgcaccagagaggatgaaatcaaaagaagaaatattcggcatggtgaggagagtatggaacgcaagagaagaggaaacgaccgcggctcatcaacgattccggccatcgtcttattcgcagccggcgatggagaaacagtggagaagggcagcgaggatgctctccctcggatggatcggcactggaatggtgggtgaagagtggtgacgcgtctggaagaggcagagatggagctcggcgtttttagggcgtcgacacgtcgtggccacgcgtcgcgcagcatccagagctggtcggcactcgatctctccctctcagtgtttctcggtcggctagggaagttgcacagaggaagggcaagccggagggattgacaagggggcccaggtcgaagtaaactaggtggaagagagatgtgtgggcagaaacatgggtgagcttggtttttggacgaatttccataattattttctcctctaattttgtagcttcaatacttaatgtgttgaccagattaactagtgttgattttactgaggtaggtatatatacctagtttccattttctttggttgcacttaaaaattatgaatggattactcacagaaattaggagaagatgggctctttggaaactagtttaaattttaggagacctaaacagagaggataaattctggaaaaattatatttattcatgataattaacctagtatttgaataaattattttccttatacacttccatgcagttaaatgcacttttaaacaattgtttggttttagccgattgagaattataatcagtctattatttgactggtttgacttatttatttgaggtatcagatttatttattaattgtaccaaaattactgtgtgttgtatatgttaagtagagcctacatgaattttcccatgattttatcttgcacgaattattttagataattcgcaagacttatctttatatatgtgttttcctcctcataaatgcatctagtaaatttataaaaattatatttggactctccttaacctgaggtgatgttgatatgaggtgatgttgatatgttagaattacatattaccttacacatgtcataagcttcttgcctattatttatgtataagtttactttagtattaaattaagcgaatgcttatagagatgattaatatagaatataccctacatgagttaggtcaacttcccctaggttttaaaacggaaatttttggttcacaaaattgaagaactttcctttcaactaattttgacgaaaatttcttcatcctaaaattcgggtatgttacaatcggctggtatcggcatcggctattatcggctatcggctagaactactccatcggcttgtcagccgattggctgttttgatctactatttgcatatcttgtcagttgcaggattaaactgactggcacgcccacatctcattaatctttggtcctgcactggagttaagcagatctcccaagcctcgtgttttctgtcaacacgcttttggcacgcccggtgggacatttaagaagtcagccaacaattcttcctcatagccgagaaacaaccaccaccaccatccccagctagcccgggctctgttaaggaaaatatgctgaaattaggattgcctaacgtcaatgaaggaaacgtcgtgccgatcgatccagaaaaattcacaccttagcagaagaaagagtttgaagcaatattgcagcaagcacaggatcagttcttgaactcattcatgcagacccgcaaggggacacttgttcagaagtacaaaataaaagtggttggtgatgatcttgagaccagttcttctaaggatggagatggaaaacaagctccagatggctcggctcagctgagtaacaaaagtgctaccgacggctctctaggaaatcaaggtgacaattatcaaggggtccatggagtgcaaggtgacggggtgcatggagttcaaggtgatggtgcccaggggttgcaaggaggaaatcttaatcagaatagtgatgcggcacaagattttttcagtaatttccaagatcgggttgactacgttgtgcatcatgctttgatcaatcaatctggggtgttagtcaataccttatcaaacatgatgaagtcaatagccgatggttcaatagctgagcatcaggctgcaggcccggtttatttgcaaggaggtgtctttccaaattatcggtctttgattaccgatgttcagccatcaactcaggcggttccctccgttgcaccaacatctcagccgacggcactggcgtcaactcccctacctgttccgtcagcactggcgccaggccagccagtgaaccctcagttgttaataagagagcagccacagcatggcgggcaggttgcgaatcggctgacccaagatcaggttgctgccacgtttctaccacctcaacctattgttgatccaatacagcagcagccgattcaacagacgccgttaagacagcaaatcatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0556900, RefSeq:Os03g0556900