Os03g0558000

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0558000| Description = Conserved hypothetical protein| Version = NM_001057017.1 GI:115453762 GeneID:4333242| Length = 2496 bp| Definition ...")
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Gene Name

Os03g0558000

Description

Conserved hypothetical protein

Version

NM_001057017.1 GI:115453762 GeneID:4333242

Length

2496 bp

Definition

Oryza sativa Japonica Group Os03g0558000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:20624893..20627388

Sequence Coding Region

20625207..20625413,20625532..20625651

Expression

GEO Profiles:Os03g0558000

Genome Context

<gbrowseImage1> name=NC_008396:20624893..20627388 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:20624893..20627388 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttgggcattttcttcttcttcttgagctggactgctggaacaccacttgctccttcttcaggttggtctctctgccgtctcacttcagcatcttcttgctgctatggtttatatggtaagcctggttgtttttctatggctgctactattgagatatggtgtgactgtggtgccggactactagctactgctctgccatttctctcttttgaggtggttttccggacgaactgcttgctgctactgctgttgcggctgaggcttctgcgccatggctgtgctcttgctgttgctactactactgcaactgcttgctgcctgtgttga</cdnaseq>

Protein Sequence

<aaseq>LGIFFFFLSWTAGTPLAPSSGWSLCRLTSASSCCYGLYGKPGCF SMAATIEIWCDCGAGLLATALPFLSFEVVFRTNCLLLLLLRLRLLRHGCALAVATTTA TACCLC</aaseq>

Gene Sequence

<dnaseqindica>1976..2182#1738..1857#aacacaacccaccaaacccaccttctttctctcctctctttctctcgttctctttctttttctctcgctctcccctgcgccgccgcatcctcaggtctcgccgccgctccaccccacgccggccgatgctccctgcctccggcagccgccccgcagccgctgccggcctgaatcggtttcgtggctcctcatgagtctatccccaaactaaccctagccatcaacccctctccaatcgatgctgctgctggctactgctctcaacgactgggattggaattttcccagccccggcgcccctgatccaagcatgactcagaccagccgtgtctccccgagctccttctctctgatcccttcattccctacttctgtgatgtgatctgattggtgttctattatatagttacctactgtgaatttctatgcttgtgaactagtcctaatgaccaacttgatgatgctatactcagaattatcctgctatctgtaggttctagattaattgatttgctataattagatgataaccatatgctatggatggatgaatgaatgcttgcataatatatcatatgaaaatgcagtactgaaactaaaaacacactaacatgattttgtccttatatatatatgcttacatgtagaattaactgaaatactgaaattgttaaaacactaacatgatcagatccttatgtatatgctttgcatgttgaaataaccgaatttctgaaattagtaacacatcaagcggattagattcaataataaatcttattgaatggtgatgtaacttgcatggttctacacttgatgatcatggcaagatgtatgctatagataatggaattatgtaaatgttgactaatttccttaaataatttactgctactgactatatgtactacctcttgcctctatgtaatttacttgatttgaaatattcatgcaaggagaaattagactatttgatgacctaactgtatgctatggtttttattcagatactatactctcctgtttcctgacaattttataaactgcgatttcatatacttaaactgaagatatatttgcgcacactaatagatgccattcttttctctaattatgctctgctcctacgcatgcattaaaaattcatcctatgacggctttactgaaccttgatttatatcactgtatacagatataaatccttaactcaaatgcgcttatagatcatccaagataattcttgctgtcaactatgcactgagatggctgatctatacttcaattatcctactaagagtccattaaattttagacgatactatcttgtccaattactcataaaaattatgtcttgcttattgaactaaggatgcatattcagtaatataaccccaacacatagtactagtatatgcacatatcaacatggctgccatctactgaggttcatttttcaggtttaatggatataactatgtgcatgcacataactcctaaacatactaatatatgcatcaaccaagaatcatgccatgatgtgatttccctctcattcttatttcaggattaccttgtcaatgactctagtgtggctgtgaagattgtgtggtttctccctctctggttctaccgcttctcctgctgggactgtaacttcactcctttattggaactggaacacttgaatatttctcctccttgctcaggcaccagctgctcctccagaaactatagtaattgggcattttcttcttcttcttgagctggactgctggaacaccacttgctccttcttcaggttggtctctctgccgtctcacttcagcatcttcttgctgctatggtttatatggtaaggtatgtgatgatcttgattggtatttggatttgctacttacttcttctcctttgctagaaacctcttgattttcttgaaactaagtgcactcctttctttttccttctactctctcagcctggttgtttttctatggctgctactattgagatatggtgtgactgtggtgccggactactagctactgctctgccatttctctcttttgaggtggttttccggacgaactgcttgctgctactgctgttgcggctgaggcttctgcgccatggctgtgctcttgctgttgctactactactgcaactgcttgctgcctgtgttgatctgcacgaccaaaccgaggctaatatatgtgtgaatttttaatgaaagctaagtgactcaccagctcgcatgccggttggataagggcttgctgccacctcaacaaagctggttcggtgggataatctaaagctatatttactaatttcccaatcaatagaagttttgtaaagtctaacatgtttggtgcttttgcacttgagtcccacaagcttggtaaattggagattactacgagttcagagactgggatgcaattgccctaaaactcaagagtttttctgaaaataaataattattgaatctttgactg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0558000, RefSeq:Os03g0558000