Os03g0565300

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0565300| Description = Protein of unknown function DUF1723 domain containing protein| Version = NM_001057035.1 GI:115453798 GeneID:4333267| ...")
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Gene Name

Os03g0565300

Description

Protein of unknown function DUF1723 domain containing protein

Version

NM_001057035.1 GI:115453798 GeneID:4333267

Length

4980 bp

Definition

Oryza sativa Japonica Group Os03g0565300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21151699..21156678

Sequence Coding Region

21151942..21154747,21154866..21155152

Expression

GEO Profiles:Os03g0565300

Genome Context

<gbrowseImage1> name=NC_008396:21151699..21156678 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21151699..21156678 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccggctacggcgagcagccgctgccgctggtacaggaggccaccgcccgaatcttctccggtggcgcagacgcgtcccgcaccaccgtccgattggcccacttcctcctcccccgcgcgggcgcctcccacccgcccgctctcccgcccctgcctcccagcgatttcggccccgtcctcgacgacggcctcaaggtcgagttcaagggctgggcgccggaatcccccaagctctggaggcggtgggtcgccaagctccgcccgcgccacgagcccctgtggcgtaaggttgggatcctcgacgccgtcctcgccaccacgtgccgggtgcgccgcgacgagggcgcgctgctccagctcgccgccttctggtgcggcgagaccaacaccttcgtgttcccctggggtgaggccacggtgacgctcgaggacgtcgcggtgctcggcggcctgccgctgctgggcaggcccgtgcgcgcgccgccgcaggacgcgctccgcggcgacgtggacgcgctcgaggccgtacgccgcgctctctacctcagcaagaacaagaacagcaggcccgaccgtaccgcttgggcgagacatttcctcgagcgccctccggggaaggtcaaagtcggcggcggcggcggcgacgaagcgtgcgggcgcctcgagcacggcgcgttcctggccatgtggctgtctctcttcgtgctaccggcggctccgttcgatgtggtccggacggaggtgctcccactcgccgcccggctggcgcgcggccgcggcgtggcgctcgctcctgctgccctggctagcatatacagtgatctctccgcgctcaagcgctacatcaatttggagaaaagatatcaggccttcgtcgtgtgggcacccctgcaaatcgttcagctttggctctggaagcggttccctgagcttcgccctcctgagaccacgggcaccaatcaacctgacggccatggcatacccacggaatcccagtggcaaaatgctctcaaggtgcttgaccccgtttatgtccacgcagtgttcatgtcacccaagaagtttgaatggaggccctatgggagtagcagcttcgcgctgcggccagagatgggtagccatcgtgttcacggccaagatatagcagaaagtgcagaattgttatccttcatactatgtttacgtgcttgtgagcttgtgggcatgcgctgcattgagcattaccgtccgcatcgtgttgcaaggcagctcagctttgaccaggatattcctggaactcttccccgtgttaactcaaactgggtggctgcatgggaaacatacaaaatggagcctaagaaatttgtattcattgttcccaagtacaagcccgctgttacaattgattatgtgcaatggtggaagccttacttgttgggatgtgctgctgctgttgttaaagctaggaagatgaaagaacttccacttttacttagtccaagaaaaagaaagattgatgtgcctcctgatgttagtccaaaaagggtaggaaatggtgcaaaggaaaaggcagtggaattgtcgtttgaggcaccaataggctcagtaagcacaataaacgaattatcttgtgtatcagccaccaaaatagtacaaggcaaatcttttcagcaaggtaataaggaaccaccagaccttgtcgttgcacatgacagagagaatagaagctcgctacatagtgaagtactgcaaaatctccttgttgaggatgccacaaacactggcagcaatgaagccttatgtgcagtaactatagctgatatgcactcaacagaagtgtcgtttgatgttccagttgccttagtaagcattgtagatgaattaccttgtgtgtcagcctccatagaagaacaaggcaaaccttgccagcaagataaagaggaagcacacaacctttctgtcacacatgacagggagaatagaagctcgctacatagtgaagtactgcaaaatctcgttgttgaggatgccacaaacactggcagcaatgaagccttaggtgccataactgtagctgatatgcactcagcagaagtgtcgtttgatgttccagttgacttggtaagtattgtagatgaattaccttgtgtgtcagccaccaaagaagaacaaggcaatgattgccagcaagataaagaggaagcacgagacctttctgtcacacacgacaaagagaatagaagctcagtagtttatgtgcactcaacacctgttgtggctgcaaacactggcaacaacaaagcctttggaccttcacccataattgatgtgcagtcagcacctgaagacgttgtggtgatcagcgatgacgataatgaggatgaggtcggtgggatgcaccaaaaaccaccgcagttggaaacagcaccatcctccttagaagggcaaaatgcagaaagtcagataatcagtgcaagcagtaatcctcaggacagccgagtgatgaaagatgttagggtccaaagcaattgtgatcacgaaactgataatgttcgaagcaatattgttctcagaaaagaatcatttgaagtacttgctgttgatactgtccagcctggttttaatctcttggatacaccaacaggggaaacgcagacatgcgctgttacaggacagatagacaagggatacatggtggaaaaagaaattttggctggtgtggaaggtatcaaaaatgtaaatgaagacgtgtccccatcatttcaagaaataaactctcctgtggaagattgcatggtggccaatagaagaatgggctcaggaaacaactattctagtggtttggcacatgtgaatactcaattgatcaacagagtagtttgtactaggacactatactatcttagaccattttggttgtcaaaacatggtcagaacaaagatgcaagtgacaccactaccgatgaaggaactttccaaccaagacgggaagttgggacgccacaaatgattgaagaggcatttgcagctcgacaagcccaaaaagttgagttgcaaaaggtaattgatcgcctgaaggaagagattgtggcactagaggttccatga</cdnaseq>

Protein Sequence

<aaseq>MAAGYGEQPLPLVQEATARIFSGGADASRTTVRLAHFLLPRAGA SHPPALPPLPPSDFGPVLDDGLKVEFKGWAPESPKLWRRWVAKLRPRHEPLWRKVGIL DAVLATTCRVRRDEGALLQLAAFWCGETNTFVFPWGEATVTLEDVAVLGGLPLLGRPV RAPPQDALRGDVDALEAVRRALYLSKNKNSRPDRTAWARHFLERPPGKVKVGGGGGDE ACGRLEHGAFLAMWLSLFVLPAAPFDVVRTEVLPLAARLARGRGVALAPAALASIYSD LSALKRYINLEKRYQAFVVWAPLQIVQLWLWKRFPELRPPETTGTNQPDGHGIPTESQ WQNALKVLDPVYVHAVFMSPKKFEWRPYGSSSFALRPEMGSHRVHGQDIAESAELLSF ILCLRACELVGMRCIEHYRPHRVARQLSFDQDIPGTLPRVNSNWVAAWETYKMEPKKF VFIVPKYKPAVTIDYVQWWKPYLLGCAAAVVKARKMKELPLLLSPRKRKIDVPPDVSP KRVGNGAKEKAVELSFEAPIGSVSTINELSCVSATKIVQGKSFQQGNKEPPDLVVAHD RENRSSLHSEVLQNLLVEDATNTGSNEALCAVTIADMHSTEVSFDVPVALVSIVDELP CVSASIEEQGKPCQQDKEEAHNLSVTHDRENRSSLHSEVLQNLVVEDATNTGSNEALG AITVADMHSAEVSFDVPVDLVSIVDELPCVSATKEEQGNDCQQDKEEARDLSVTHDKE NRSSVVYVHSTPVVAANTGNNKAFGPSPIIDVQSAPEDVVVISDDDNEDEVGGMHQKP PQLETAPSSLEGQNAESQIISASSNPQDSRVMKDVRVQSNCDHETDNVRSNIVLRKES FEVLAVDTVQPGFNLLDTPTGETQTCAVTGQIDKGYMVEKEILAGVEGIKNVNEDVSP SFQEINSPVEDCMVANRRMGSGNNYSSGLAHVNTQLINRVVCTRTLYYLRPFWLSKHG QNKDASDTTTDEGTFQPRREVGTPQMIEEAFAARQAQKVELQKVIDRLKEEIVALEVP </aaseq>

Gene Sequence

<dnaseqindica>244..3049#3168..3454#ggtcgtcaccaccgtcacgccgtgccgtgcagaccatcctctctctcctccattaccatccgctccccccgactccgacgccgcgcaggtgcagcgcaagcatggcagagtaaggcggagacagcgtcgcaagcagaagcagctctgacactcgccgccagattccgctccccaaacaccgcactccaattccctcttcgtcgggtgcatcggccgcccaccaagccccgcccgccgaacaccatggccgccggctacggcgagcagccgctgccgctggtacaggaggccaccgcccgaatcttctccggtggcgcagacgcgtcccgcaccaccgtccgattggcccacttcctcctcccccgcgcgggcgcctcccacccgcccgctctcccgcccctgcctcccagcgatttcggccccgtcctcgacgacggcctcaaggtcgagttcaagggctgggcgccggaatcccccaagctctggaggcggtgggtcgccaagctccgcccgcgccacgagcccctgtggcgtaaggttgggatcctcgacgccgtcctcgccaccacgtgccgggtgcgccgcgacgagggcgcgctgctccagctcgccgccttctggtgcggcgagaccaacaccttcgtgttcccctggggtgaggccacggtgacgctcgaggacgtcgcggtgctcggcggcctgccgctgctgggcaggcccgtgcgcgcgccgccgcaggacgcgctccgcggcgacgtggacgcgctcgaggccgtacgccgcgctctctacctcagcaagaacaagaacagcaggcccgaccgtaccgcttgggcgagacatttcctcgagcgccctccggggaaggtcaaagtcggcggcggcggcggcgacgaagcgtgcgggcgcctcgagcacggcgcgttcctggccatgtggctgtctctcttcgtgctaccggcggctccgttcgatgtggtccggacggaggtgctcccactcgccgcccggctggcgcgcggccgcggcgtggcgctcgctcctgctgccctggctagcatatacagtgatctctccgcgctcaagcgctacatcaatttggagaaaagatatcaggccttcgtcgtgtgggcacccctgcaaatcgttcagctttggctctggaagcggttccctgagcttcgccctcctgagaccacgggcaccaatcaacctgacggccatggcatacccacggaatcccagtggcaaaatgctctcaaggtgcttgaccccgtttatgtccacgcagtgttcatgtcacccaagaagtttgaatggaggccctatgggagtagcagcttcgcgctgcggccagagatgggtagccatcgtgttcacggccaagatatagcagaaagtgcagaattgttatccttcatactatgtttacgtgcttgtgagcttgtgggcatgcgctgcattgagcattaccgtccgcatcgtgttgcaaggcagctcagctttgaccaggatattcctggaactcttccccgtgttaactcaaactgggtggctgcatgggaaacatacaaaatggagcctaagaaatttgtattcattgttcccaagtacaagcccgctgttacaattgattatgtgcaatggtggaagccttacttgttgggatgtgctgctgctgttgttaaagctaggaagatgaaagaacttccacttttacttagtccaagaaaaagaaagattgatgtgcctcctgatgttagtccaaaaagggtaggaaatggtgcaaaggaaaaggcagtggaattgtcgtttgaggcaccaataggctcagtaagcacaataaacgaattatcttgtgtatcagccaccaaaatagtacaaggcaaatcttttcagcaaggtaataaggaaccaccagaccttgtcgttgcacatgacagagagaatagaagctcgctacatagtgaagtactgcaaaatctccttgttgaggatgccacaaacactggcagcaatgaagccttatgtgcagtaactatagctgatatgcactcaacagaagtgtcgtttgatgttccagttgccttagtaagcattgtagatgaattaccttgtgtgtcagcctccatagaagaacaaggcaaaccttgccagcaagataaagaggaagcacacaacctttctgtcacacatgacagggagaatagaagctcgctacatagtgaagtactgcaaaatctcgttgttgaggatgccacaaacactggcagcaatgaagccttaggtgccataactgtagctgatatgcactcagcagaagtgtcgtttgatgttccagttgacttggtaagtattgtagatgaattaccttgtgtgtcagccaccaaagaagaacaaggcaatgattgccagcaagataaagaggaagcacgagacctttctgtcacacacgacaaagagaatagaagctcagtagtttatgtgcactcaacacctgttgtggctgcaaacactggcaacaacaaagcctttggaccttcacccataattgatgtgcagtcagcacctgaagacgttgtggtgatcagcgatgacgataatgaggatgaggtcggtgggatgcaccaaaaaccaccgcagttggaaacagcaccatcctccttagaagggcaaaatgcagaaagtcagataatcagtgcaagcagtaatcctcaggacagccgagtgatgaaagatgttagggtccaaagcaattgtgatcacgaaactgataatgttcgaagcaatattgttctcagaaaagaatcatttgaagtacttgctgttgatactgtccagcctggttttaatctcttggatacaccaacaggggaaacgcagacatgcgctgttacaggacagatagacaagggatacatggtggaaaaagaaattttggctggtgtggaaggtatcaaaaatgtaaatgaagacgtgtccccatcatttcaagaaataaactctcctgtggaagattgcatggtggccaatagaagaatgggctcaggtatgaggattaataaaaatacagttccatatttcaatcaagctatgtaccaaataaatcatgacaaaaatgtgttgacgataacgtaaactttatgctattttttcaatttttgtaggaaacaactattctagtggtttggcacatgtgaatactcaattgatcaacagagtagtttgtactaggacactatactatcttagaccattttggttgtcaaaacatggtcagaacaaagatgcaagtgacaccactaccgatgaaggaactttccaaccaagacgggaagttgggacgccacaaatgattgaagaggcatttgcagctcgacaagcccaaaaagttgagttgcaaaaggtaattgatcgcctgaaggaagagattgtggcactagaggttccatgagaggacaggtgctcctcaataaattgaggtatggcttggagtaaatatatgtcagtacttttgagtctttagagcatgagtcctgatgttattattactacattaaactatactaacagcgtgcgctaggcagtggctgagtgctgagagaaacgtaaaggggcctcatcaaagagatgatacttaggccccgttcttttctcacaaagataaagattttacctcggtatccgttagcacgcttttcaaactacaaaacgtgcgaaaactttctatatgaaagttgctttaaagtatcaaatatattcatttttcaagtttgtaataattaaaactcaattaatcatgcgttaatggctttctccttttgcgcacccgcttttaatcttcatcttcagaagatttgaacggggccttaatgtagtatttcccctagagatttgctcatttacatgttatacctcacccttacacagtggattgtgcttcctcatcttgaagtgaaactaaaatacagttgataagatattagttgattttgggaagttctacattggtagaagttaaatctaactgttgaattcatgtacacctcccattcagaattaggatcacagtggaagcacatccactagaagcccccaactgaccaacggcctcgaggcaccatggtggccacccattctgactccaggtctgccaccagtctttgaatcccacacaaagaactgcccttcttccgcgttgctgtcctcatttaccatatctcatgttgggtttcgcttgtatcatatttgctaatggtttcttggtgaggtagccagcggccagcggaggcaatgagccgatgagggaggcagctaagcgaagaatgaatgtgttcagatgctgctcgatgcgaaaatggaggtatgatctatagattcagcagtgatttttttatgcccgacttatcatctgatcatggattagtgaattgcatcattggtacttcatgaaagaaattgtcgaggaagacttgggagtgtggtaggttgcagggaagaaccgcatgttggtgaatgagcttgaagcgttgaatgtgtattgtttttgcatccaacctgaaagatgcagatttttgcctctgataagtggaatgcatttagttgtttttttgtccattggatcgacatatatgaacattcagcagtaagaggtccttaagatggccacttgatgacatggaaaccctgttggtgcgatcaacgttttgacgagatctgttgctcttcggaaaagagaactttttgaattaatttgcttatccgaaagaagtgtgttcatggttaatatgcatacctttgagcacaaatgacttatgttaagggttgattaaccacttttgtacttttttttgggaggaatcatttatctacttgttacactggtaatacttgaccattaactgaaaacatgcaatctgctttagcatccacttctgaattttatatgtgaatggatgcagaactctgctttagctaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0565300, RefSeq:Os03g0565300