Os03g0566500

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0566500| Description = Lupus La protein family protein| Version = NM_001057039.1 GI:115453806 GeneID:4333271| Length = 3935 bp| Definition...")
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Gene Name

Os03g0566500

Description

Lupus La protein family protein

Version

NM_001057039.1 GI:115453806 GeneID:4333271

Length

3935 bp

Definition

Oryza sativa Japonica Group Os03g0566500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21236777..21240711

Sequence Coding Region

21236978..21237253,21237330..21237455,21237745..21237813,21237893..21237940,21238073..21238154
,21238243..21238322,21238424..21238495,21238572..21238666,21240056..21240137
,21240264..21240623

Expression

GEO Profiles:Os03g0566500

Genome Context

<gbrowseImage1> name=NC_008396:21236777..21240711 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21236777..21240711 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacaggagagccgcggcagctccggcaaggcgccggtgacggtgacggtgacggctgcgggggcgagcagcagcggcgagtgctcgacgccgcccttcaggctaaacgtccacgctcccgagttcgtgccgaggtcgccggccgccagcccgatggccgcggccgccgccggctactactcgccgttcttgcagctgccgggcagcagcattgggctcggcgcggactggagcatcttcgccgacccagatccgaccttcttcctgccggactttggacacgccaagatcggcggcggcaatgggcagcccaagggggcaagtccggccgacattgcacagaagatcatcaagcaggtcgagtaccaattcagtgacacgaatttggtcgcaaacgatttcttgatgaagatcatgaacaaggatcctgagtgctatgttcctatgtctgtcatttcatcctggaagaaaatcaaggctatgggggtgaccaaccaactgctagtgaatgctctaagaacatcctcaaagctcgttgtgagtgacgacggtaagaaggtgcgacgagcacagccattcaccgagcgacacaaagaagaattgcagtctcgaatggtcatcgcggagaatttgcctgaggattcaaccaggaacagcctcgagaagatcttcggcatcataggaagcgtgaagaacatcaggatatgccacccgcaagagcctagctccgcgagatcttccaagtctgacgcgctaatcagtaacaagttgcacgcgcttatagagtatgagacctcgcagcaagctgatcgggcagttgataagctcaacgacgagcgcaactggagaaaggggctccgcgttcgcccggtgctacgtcgatcgcccaaatcagcgatgcgattgaagcggccggacttcgaccacctcatgatctccgacgacgatcactcgccgcaatcccaggcgtcgtcggattcgccaatggcggaccacttgcctgaccatcaccaggaagatcagcacggtaagaagtcgtgggggagagggcggggaagcaggccgcacgctgccgccggcggggcgccgcaagccgccgccgccgcggccgggcatttggactccctgatgatgatgagcccccgccacgcgccgcaggggccgaggatgcccgacggaacgcgagggttcaccatggggcgcgggaggccgtcgccggctgccgtcctccggagctcgccggcccgcgcagtcgccgctcctgctccggcggctgtgatgatctaa</cdnaseq>

Protein Sequence

<aaseq>MPQESRGSSGKAPVTVTVTAAGASSSGECSTPPFRLNVHAPEFV PRSPAASPMAAAAAGYYSPFLQLPGSSIGLGADWSIFADPDPTFFLPDFGHAKIGGGN GQPKGASPADIAQKIIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIK AMGVTNQLLVNALRTSSKLVVSDDGKKVRRAQPFTERHKEELQSRMVIAENLPEDSTR NSLEKIFGIIGSVKNIRICHPQEPSSARSSKSDALISNKLHALIEYETSQQADRAVDK LNDERNWRKGLRVRPVLRRSPKSAMRLKRPDFDHLMISDDDHSPQSQASSDSPMADHL PDHHQEDQHGKKSWGRGRGSRPHAAAGGAPQAAAAAAGHLDSLMMMSPRHAPQGPRMP DGTRGFTMGRGRPSPAAVLRSSPARAVAAPAPAAVMI</aaseq>

Gene Sequence

<dnaseqindica>3459..3734#3257..3382#2899..2967#2772..2819#2558..2639#2390..2469#2217..2288#2046..2140#575..656#89..448#gcgctcttgtacaccaattcacacacacattttggatctcgacacatctctgtgccccttgccactccgatcgatcgaaccggtcgccatgccacaggagagccgcggcagctccggcaaggcgccggtgacggtgacggtgacggctgcgggggcgagcagcagcggcgagtgctcgacgccgcccttcaggctaaacgtccacgctcccgagttcgtgccgaggtcgccggccgccagcccgatggccgcggccgccgccggctactactcgccgttcttgcagctgccgggcagcagcattgggctcggcgcggactggagcatcttcgccgacccagatccgaccttcttcctgccggactttggacacgccaagatcggcggcggcaatgggcagcccaagggggcaagtccggccgacattgcacagaagatcatcaagcaggtttacatttcaacatgatgccattttgggttggattgagcgttatctttttttattattattttactgatttgagtgctctctttgaattcaacaatgtttcctccctctgtttcttggaatcaggtcgagtaccaattcagtgacacgaatttggtcgcaaacgatttcttgatgaagatcatgaacaaggatcctgagtgctatggtaatagaaaacaaccattagttttggataatactctatatcggtcaaccgattttatcaaataaatctgacgctgcatgcaatgggtgcatgtgtgcttctgaatgcaattattcctactcttacgttacatgcgtggttcttcaattcactctcctactttacgtagtttgaattgctttctctactcgtcttaaccacattttaacaaacttcaaacgattttttcttttaaattattgatccaatttatgattttattacaccattatattcgttataattaaatctttgcaacaagatcacatatgactatattttaattaatatatatatatgtttcaaccgttaagattttgtgattcatttatcagaataagatgtttcaactaggattcaactatgttgcactatattacaatggatttttttaatgttgcacataatgttatttgtatgttttactaagtatttttgatgtttcactagtttatttgtcaatgttgcacatggtgctagttcgatgtttgactaagtattttgtgatatttcattagcttatatgtaaatgtttcacatggttgtctttgaatgtttcagtaagtattttttatgtttcaataattataagatttattctttttaaagaaatatagttatgtgagatcttgttgtaaatattaaattgcaacagatacaatggtgtaattagattacagatcggataaataatttagagaaaaattcagtttaaagatttacaagaaagtaaagaaaataaaagtgaaaagatacactactgaaagcatgtactagagccagattcatactatggcccgatttagttcccaactttttctttaaacttccaacttttctatcacatcaaggcttagtttagtttctaactttttcttcaaacttccaatttttccatcacatcaaaactttcctacacacaaacttccaatttttccttcacatcgttgcaatttcaatcaaacttccaattttagcgtgaactaaacacaccccaaaattttcctacacacacaagcttccaacttttccgtcacatcgttccaatttcaatcaaactttcaattttggcgtgaactaaacacaccctatgcgtacatctgcatacaacagtttgcgtgcacatccatgcaatgggacaacgggcacaagttgagcgtccgatttttttgccttttcatcaggcgtccgaagcatagtgccgtccattagttttacacaccactacactgatgaactattttgagatcagacaactattgtctataagaaaaaaaatgacatgaggtaattgatcgccgaggaaaaaatcttaacagaaatttatgttcctttccatgtgctggacagttcctatgtctgtcatttcatcctggaagaaaatcaaggctatgggggtgaccaaccaactgctagtgaatgctctaagaacatcctcaaagctcgtaagtcgccgttgctaactgtaatctcttcttattattgcctgaatcctaagattcatgatttccttctctggaggttgtgagtgacgacggtaagaaggtgcgacgagcacagccattcaccgagcgacacaaagaagaattgcaggtcagcggcaagattttattccttatgcgaaattcagatgcttattacaagtttagcattgtgaaccatccatggccaattaactcccattaatttcacagtctcgaatggtcatcgcggagaatttgcctgaggattcaaccaggaacagcctcgagaagatcttcggcatcataggaaggtcagaccgacagatcggtttaactgttgatgtgtaacttgtggcatgtccattaacttgtgtggagttccgttccgtaattgaacagcgtgaagaacatcaggatatgccacccgcaagagcctagctccgcgagatcttccaagtctgacgcgctaatcagtaacaaggtacttacattaattttcagttttttttctttcttttttttggcaatacgcaaaaaaaatgtgtatcatgtattgagcatgttgctgacactgatcttgatcttgtattatgtttgattcccggttccaaagttgcacgcgcttatagagtatgagacctcgcagcaagctgatcgggcagtaagttccctgaatttactatcgtttcagtactactattcttcttctggactgaaggaatgtaactgtgttttgacaggttgataagctcaacgacgagcgcaactggagaaaggggctccgcgttcgcccggtgctacgtcgatcggtaattaatctgaaattcttcctctacgcccatgcaaactactccctatcttaaaatgtattacgttgttgactttttttataacgtttgaacatttattttattttaaaaattataaatattatttattttgttgtgaattatttctcatagaagaaactctagtcttaatttataattttacaaatttatactaatttttttaataagactatgcacttgagattaatgttgtagaaggcaatgcatccacaaaatgggaatagtcacttgattcttgtgttcgtagcccaaatcagcgatgcgattgaagcggccggacttcgaccacctcatgatctccgacgacgatcactcgccgcaatcccaggcgtcgtcggattcgccaatggcggaccacttgcctgaccatcacgtaagcaacgcaaccagctgagccttcttacctgttgcggaccaacacctgacccagctggatcctcgattggcagcaggaagatcagcacggtaagaagtcgtgggggagagggcggggaagcaggccgcacgctgccgccggcggggcgccgcaagccgccgccgccgcggccgggcatttggactccctgatgatgatgagcccccgccacgcgccgcaggggccgaggatgcccgacggaacgcgagggttcaccatggggcgcgggaggccgtcgccggctgccgtcctccggagctcgccggcccgcgcagtcgccgctcctgctccggcggctgtgatgatctaatggtggtggtgtttttagcgcgcttgttcgttagcaagtggttgagttatttctgcaatttttcaggtccggaataaattttgaattcggaattagtaaataccaagttgtaatatcgaccttttggattgggtctagtagtaattattttctcactatgtaacaattttaaattttaatataactaaaaagaaaactcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0566500, RefSeq:Os03g0566500