Os03g0567600

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0567600| Description = Protein of unknown function DUF563 family protein| Version = NM_001057043.1 GI:115453814 GeneID:4333275| Length = 37...")
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Gene Name

Os03g0567600

Description

Protein of unknown function DUF563 family protein

Version

NM_001057043.1 GI:115453814 GeneID:4333275

Length

3796 bp

Definition

Oryza sativa Japonica Group Os03g0567600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21275596..21279391

Sequence Coding Region

21275844..21277009,21277446..21277586,21277757..21277882,21278042..21278089,21278196..21278300
,21278406..21278550

Expression

GEO Profiles:Os03g0567600

Genome Context

<gbrowseImage1> name=NC_008396:21275596..21279391 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21275596..21279391 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcgggcgagcggccgaagctggtccggggcgtccggcaggagtcgcggcggttccggctgctggtcatcgtcgtcggcttcttcctcgtctccctcaccttcgtcttcgtttccaagcccgacgccatcctcttcagcttgaacggcaagcttccggtggaacaggcgccgacgtccatcctgatccagcagaaggtcaacgagccctccggcgagtcccggaaaacctccaccgacgctctccgtggtgaccccaaagtggtcgacgacgaagctgatgcgaaaccaaaagggacaggaggaggcagcgaggaggaagaggggagagtgctgagcgagccggacccgaccagcggaatgatggagccgacccacaacaaggacggcaacggccataaatctcaccaggagacgttaggcggtggaggagacggggagagtaaagggaatgacgaggagggcgaacacgcggagcagaagcataaagtcaccctcccaacagtttccaattacacaattcatgatgctgctgaggacactgaaaatgccaagcaagaaggtatgaataatgtccagcagggtagcaagcccttgtgtgatttctctaatttcagagcaaatgtctgcgagatgcgtggtgacgttagaattcatccaactgccacttcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccgtaccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcgagcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactgaccggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacgactgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtggacgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagcaaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggagttcacaatcgactcaaccaaggcaccgcacaactattcgatggctgatttcaacagattcatgcgtggagcttactcgctgggcagggacagtgtgaccgtgctcggtgagtaccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaacctggatgagatcatttccatggcagaggagcttggctttgaggtggtgattgacgaggccaatgtgagctccgatatctcccggtttgcgcggctggttaactccgtcgacgtgatgatgggtgtccatggtgctgggctcacaaactgtgtgttcctgccacagcatgcgacgctcattcagatagtgccatggggtggcctggactggatatcacgcaccgatttcggcaaccctgcagagctgatgggtctgaggtacaagcaatacagcatcggcgtcgacgagagcagcttgacagatcagtaccctagagaccacgagattttcaagaatcctatctcattccaccagcgcggattcgatttcatcaggcagactttcatggacaaacagaatgtgaagctggactgcaagaggttcaggcctattcttctggaggcactggataatctaaacccgtag</cdnaseq>

Protein Sequence

<aaseq>MKAGERPKLVRGVRQESRRFRLLVIVVGFFLVSLTFVFVSKPDA ILFSLNGKLPVEQAPTSILIQQKVNEPSGESRKTSTDALRGDPKVVDDEADAKPKGTG GGSEEEEGRVLSEPDPTSGMMEPTHNKDGNGHKSHQETLGGGGDGESKGNDEEGEHAE QKHKVTLPTVSNYTIHDAAEDTENAKQEGMNNVQQGSKPLCDFSNFRANVCEMRGDVR IHPTATSVLFMEPEGSQRDEVWKIKPYPRKGDEFCLSHITEVTVKSSKVAPECTKYHD VPAVIFSLTGYTGNLFHDFTDVLVPLFTTASEFNGEVQFLITDMALWWTIKYQTVLQK LSKYPVIDFSKDDQVHCFKHAIVGLHAYMEFTIDSTKAPHNYSMADFNRFMRGAYSLG RDSVTVLGEYPKIKPRLLIIKRHRTRMFLNLDEIISMAEELGFEVVIDEANVSSDISR FARLVNSVDVMMGVHGAGLTNCVFLPQHATLIQIVPWGGLDWISRTDFGNPAELMGLR YKQYSIGVDESSLTDQYPRDHEIFKNPISFHQRGFDFIRQTFMDKQNVKLDCKRFRPI LLEALDNLNP</aaseq>

Gene Sequence

<dnaseqindica>2383..3548#1806..1946#1510..1635#1303..1350#1092..1196#842..986#ccgcgtccccaccttatcacttccccaccgaaccgtacaccgtttctcggtgaaaaaagcgcgatcctctctcctcatccatcgccgccgacgccccctcctcatctagcatcgccgcccctcatccttcagcgccaccgcgatctctcaacggcggaagacggaaggccgccccatccgttgcgcctccctcttccaccgccggcctccacatccggcgccgcctctccccctcctccccatccaccaccgcttcaccctcctcttcgagcgacgagattggtggcggcgagcttcgagcgctgaaggccgacgagctccgtgcggcggagggtgaggaggtcggcctctctccttccactgccgctgcggttatctggatctggtggccgcacctcgccgtcgcttctctgttcctccatcgccattgctgctcgttcaggggaccacgccgcgggggacacagctcgcccaacgcgtggctcgagcagtgacgccacagtccagcgtggtgcattgaacatggggccttacgggagtagtagaatgctgtgacgtggtatgctggggctgaatgcacatcagcacatgtatgaattgtgaacggggcctttagaatagaagacgagagagccaagcaagaaagccagccattcgccagcggttcactacaagtagccagcgcgccacccagcagtttccccaccaactctgttttccttggccctcctcgtctctggtcaaccgggggcaagtctgactgcgtccgcatctttgctttctctctcttcttcttcttccgcgcctgtttcttggctcccggccgaggacggcgggcgggatgaaggcgggcgagcggccgaagctggtccggggcgtccggcaggagtcgcggcggttccggctgctggtcatcgtcgtcggcttcttcctcgtctccctcaccttcgtcttcgtttccaagcccgacgccatcctcttcagctgtaagttgacaaggccaattttggaatctctactcttacatgcgcagcgcagtgaacggcaaagctaaattcgccctcttttttggtttcttttcatgtgcacagtgaacggcaagcttccggtggaacaggcgccgacgtccatcctgatccagcagaaggtcaacgagccctccggcgagtcccggaaaacctccaccgacgctctccgtaagctcctcccctctcatcctctagccgatctttacgccttctcgcacggcgaattgcggggagcatctgacttcatcctgtcctgtttctttcccttcttcaggtggtgaccccaaagtggtcgacgacgaagctgatgcgaaaccaaaaggtcagttaattaatttcctttttttttctccgtcacaattttacctgacggatacgaacggtgttcgttcgttcttgctcttgttactgcctagcctaccttatcttttgcttggtctcctgattgcacgtgtggtacggcctcgtctgatctccacagggacaggaggaggcagcgaggaggaagaggggagagtgctgagcgagccggacccgaccagcggaatgatggagccgacccacaacaaggacggcaacggccataaatctcaccaggagacgttaggtgaaccgtcgcagttaacccccataatttctttgtccacgagctatgaatttttccagaattttcatacattcggtagagagctcgtggatccgtgatctgaaactcagagctgggatgggtaactgagcctttctgtcaatgattgcgctgatcgatctgtactgtaggcggtggaggagacggggagagtaaagggaatgacgaggagggcgaacacgcggagcagaagcataaagtcaccctcccaacagtttccaattacacaattcatgatgctgctgaggacactgaaaatgccaagcaagaaggtatactatcactgtactccacacattcgctggtacacgacaactgtcttaatttgtcctagtcttaggatatgcgatattggcggttggcgtatccattttaagtttttgatctagacactactagtagtactagtcggcactaagcattcaatgaagatatgcttcaacacctcttcagaatttaagttatctggaattttaggccccagggcaagggatgatatcgtcccgtaccgtataattatatgctatcgttccgatgatgattgttgctggcatccaccgttccagcactgcgttgcatttttattgatgcatcctgtcactgtttctttctctgctgttcccaccttttaatgaagaaaatacatgtttttgtttgaccaaaatgaaaatacatgttcctgacgcacaacgttccatttctttacaggtatgaataatgtccagcagggtagcaagcccttgtgtgatttctctaatttcagagcaaatgtctgcgagatgcgtggtgacgttagaattcatccaactgccacttcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccgtaccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcgagcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactgaccggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacgactgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtggacgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagcaaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggagttcacaatcgactcaaccaaggcaccgcacaactattcgatggctgatttcaacagattcatgcgtggagcttactcgctgggcagggacagtgtgaccgtgctcggtgagtaccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaacctggatgagatcatttccatggcagaggagcttggctttgaggtggtgattgacgaggccaatgtgagctccgatatctcccggtttgcgcggctggttaactccgtcgacgtgatgatgggtgtccatggtgctgggctcacaaactgtgtgttcctgccacagcatgcgacgctcattcagatagtgccatggggtggcctggactggatatcacgcaccgatttcggcaaccctgcagagctgatgggtctgaggtacaagcaatacagcatcggcgtcgacgagagcagcttgacagatcagtaccctagagaccacgagattttcaagaatcctatctcattccaccagcgcggattcgatttcatcaggcagactttcatggacaaacagaatgtgaagctggactgcaagaggttcaggcctattcttctggaggcactggataatctaaacccgtaggctttgagatgctcttgtacaatgttccatttttcttttcacggttcgttccttttacttttatgtagtaaatctgttgtttattctctctctatctctcatggctttcatgaggagatgcaaattgtctgaattatagaaaaattaagaactacttgtgtgatagtgtaaactgtataaattgccgtcgctccaagatggaacaatattcattctaatcatataaaggttccttgaattattcatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0567600, RefSeq:Os03g0567600