Os03g0568500

From RiceWiki
Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0568500| Description = Protein of unknown function UPF0136, Transmembrane family protein| Version = NM_001057045.1 GI:115453818 GeneID:43332...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0568500

Description

Protein of unknown function UPF0136, Transmembrane family protein

Version

NM_001057045.1 GI:115453818 GeneID:4333277

Length

2919 bp

Definition

Oryza sativa Japonica Group Os03g0568500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21318929..21321847

Sequence Coding Region

21319140..21319212,21319350..21319437,21321425..21321623

Expression

GEO Profiles:Os03g0568500

Genome Context

<gbrowseImage1> name=NC_008396:21318929..21321847 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21318929..21321847 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgacttctgcttcacgatcccctacggcttcgccgtcctggccggcggcgtgctgggctacgcccgccgcggcagcaccgcctccctggccggcggcgcgggcgccggcgcgctcctcctcctcgcgggcttcgtcagcctcaagaccttcgagaagcgccgcaactcctacctcgccctcgccctcgagaccctatgtgcactagctttgacttatgttatggggcagagataccttgagacttcaaagataatgccagctggtgtcgttgctggcctcagtgctttgatgtctgcgttctacctgttcaaaattgcaactggtggcaaccatatcccaccgaagaaagagtga</cdnaseq>

Protein Sequence

<aaseq>MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLA GFVSLKTFEKRRNSYLALALETLCALALTYVMGQRYLETSKIMPAGVVAGLSALMSAF YLFKIATGGNHIPPKKE</aaseq>

Gene Sequence

<dnaseqindica>2636..2708#2411..2498#225..423#gaaatgacgaaagtgcgcctcccgccgcagaccagaccgaccaccgatcgacgacttctctccgcggcgcaccacggattagccaaaaataagcgagagcgagtacgagagagattgagagagagagtcagagagagagagaagaaactgctctcgagatctcaccggcgaggcggggcgagatctggtaagagagaaggagggagggaggccgagagagcgagatgcacgacttctgcttcacgatcccctacggcttcgccgtcctggccggcggcgtgctgggctacgcccgccgcggcagcaccgcctccctggccggcggcgcgggcgccggcgcgctcctcctcctcgcgggcttcgtcagcctcaagaccttcgagaagcgccgcaactcctacctcgccctcgccctcgagacccgtacgccccctcctcgtcctccattttttcgctgccctcggtgcaaatgttccatggttggttcttctccatcctgccttcttggaatcgtgctatggatggaggtgaagtacagatcgcattttttgaatttgcgcagtggtggatcgctgcataattttgcccccaaaaaaggctatgcatgtattttgggtgttataccatgtcgggatgtgcagtttagtggtgaaatggagtgatagatggcgatggtggcgtctctagtagtctagcaacttgactttgttaaggttaggattctgtggcacttatggacgtatagatgtgtttaggaatatcactttggctgcattttcaagggagggatgttctcagtggtaagcacttgggaattcctgtcaatttcgttcagattgttgtgggcagcagggaaatggataccaggatcctcctctcatactgccaaaggcagtgcggcagcaaatctgtctctatgtgatagtcctgcatttgtatgaagacaaaactaaacaccttttctgaatccggtagtcatagcttcaattacccattgtctgataatctagtgctactaatgactccccagtctccagcaaggaggcatttcatctcatgggacaccataataaaggctggtagctactgaattcattgctatctaaattgctcccttacaacgatggcaattgattgcattggtgcgattgttaagatttacagattttgctcaataggcattgatcatagccaaattagtgaatctagcattggagaatgttgaacacatttgtcctcaatgcctgaatagttgctaatcactctcagatattccctaacagagtatggtatttagatttgcagtagttctcaatgccttattgaatttacatggtagctcatttttcattcattctctgcaaattttattagtactagtcaaccagggcatggaaagcatgttttagtgtaggtatattagatattgaatttttttctacgatgtttgtatttagtttgcagattgatatctgatgaaaattagtttgcatgccagatagcttttgtgatcaactcggactccgttaagtatgtgcacatggtggtttgattattttcttgtttggtgggacttttgagtctcgacacttgcatagaatctgaacaaactcatcatattgattagggacatctgtaggatgtaatagttaaatatattatatggctggttttatttcgttttatcaactagataatttttattaatgtacgaattcttgcctcttagttaccaatctaggattaacatggggcctttctaggaaggcctccaattagtgcaaagaatgatatactatttagatctctgttagagtttgtaactgtatactgtatatacttttgtttttgttaatttcagttctaaatttgttgctagagagatcatctatgcatgttgtcgtatctttattgacaatggaaagcagtaaaagtatgtgcagtttaattaatgtgcacatgttttattgaaacattccacctttcagtcagatctagattcgctaactcaatggactgtaatataaattgtagcattgttgcctgtgtttaatgctttgactgtatcttcagatcttccttttagcaatatttagttatcgcagtattgcttctagtaggagctgaaaagatctcatcagtatcattcatttaagctattttttagaaaatgattcatttaagctaatgacccttgctttaagttaataaatcagttttgacgaaaggaactgagaaggaaatataccacggaatgaactttgtccgaaaaatgtatccaccatttcctgcagacctgcacttcacctcatttctgtcttcttaccttacgtccaccttttcctgcactttacctcattgctttgtccttttgtctttattaactgtaaaattttgctttgtcgaacagtatgtgcactagctttgacttatgttatggggcagagataccttgagacttcaaagataatgccagctggtgtcgttgctggcctcaggtaaaaccctctccgaactagtatacacttccatcgctgtattctgaaaactttctgagtttgcagatatttcatttgtattcctcttgcaaatacaatatgtatgcattatgaagctaacttttacgttattgcagtgctttgatgtctgcgttctacctgttcaaaattgcaactggtggcaaccatatcccaccgaagaaagagtgaaccaggctttgcttgtgaagcatgttttgttatactctaagactacgacagatttgtgttgtggagtttcattgtaagtccagtgatcagcaaagccatttttcgcctgtaattctttagagtgcacttctgatgtctgaacaatgtaaaagaattaaatatttaacttcctacggtacgtgtatatgaatgatatactcctgaacttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0568500, RefSeq:Os03g0568500