Os03g0569800

From RiceWiki
Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0569800| Description = Protein prenyltransferase domain containing protein| Version = NM_001057050.1 GI:115453828 GeneID:4333282| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0569800

Description

Protein prenyltransferase domain containing protein

Version

NM_001057050.1 GI:115453828 GeneID:4333282

Length

2977 bp

Definition

Oryza sativa Japonica Group Os03g0569800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21410470..21413446

Sequence Coding Region

21410474..21412402,21412835..21412958,21413056..21413324

Expression

GEO Profiles:Os03g0569800

Genome Context

<gbrowseImage1> name=NC_008396:21410470..21413446 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21410470..21413446 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcacctcctcgctcccgccgcccaccgtcccgggctccaagcccaggcccgcggcggccacctccgtctccaccgctgccaccgccgacgccgcggtcgctggtggccggagcgggagcgggagcgggagcgggatcggccgcctctccgcgctcatccgctccctctgctccgcaggccgcaccgccgaggccgcgcgcgccctggccgacgcgggggacgctgcgggcgtcgtcgcctacaacgccatggtcgcggggtactgccgcgcaggccagctcgccgccgcgcgccgcctcgcggccgccgtcccggtcccgcccaacgcctacaccttcttccccgtcgtgcgggggctctgcacgcggggcaggatagccgacgcgctcgaggtgctcgacgaaatgtcgttcaaggggtgcgcgcccatcccgccaatgtaccacgtcatcctcgaggccgcgtgcaggagcggcggtttccggaactcggtgagggtcctcgaggcgatgcacgcgaagggatgcactctggacaccggcaactgcaatctcgtcctcaatgcaatctgcgagcaagggtgtgtggacgaggctgtggggctgctcaggaagttggcattcttcgggtgcgaggccgacatcgttagctacaacgcggtgttgaagggattgtgtatggccaagcggtggggagatgtggaggagctcatggatgagatggttagggtggactgcgcgcccaatatcgtgacgttcaacaccctgattggttatttgtgccggaatgggttgtttgagcgggtgcacgaggtccttgcacagatgtcggaacacggatgcacacctgacatcagaatgtacgcgactatcatcgatgggatctgcaaggaagggcatctggaggttgcgaatgagattttgaataggatgccttcgtatggtctcaagcctaatgttgtttgctacaacaccgtgttgaaaggcctgtgcagtgctgagcggtggaaggaagctgaggaattactgtctgagatgtttcagaaggactgcccccttgatgatgtgacattcaatattcttgttgatttcttttgccaaaatgggttggtcgacagggtgattgaacttcttgagcaaatgttgagccatggatgcatgccggatgtcatcacatacacaactgtaatcaatggattttgcaaagaagggcttatcgatgaagctgtcatgttgcttaaaagcatgtcatcatgtggatgcaagccaaatactgtcagttatactattgtactaaaaggtttgtgcagcgccgggagatgggtagatgctgaggaactgatgtctcaaatgattcaacaaggttgtcctccaaatcctgttacatttaatacactaatcaatttcttgtgcaaaaaagggttggttgagcaggccattgaacttcttaagcagatgctagtgaatggatgcagtcctgacttgattagttatagtacggtgattgatggacttggcaaagctggcaagacggaggaagcactcgagctactaaatgtgatggtcaataaagggatcagcccaaatacaataatttattcatcaatagcttgtgctctatctagagaaggcagagttaacaaggttattcagatgtttgacaacattaaagataccacaataaggtctgatgcagtgctctacaatgctgttatttcttcgctttgtaaaagatgggaaactgatcgtgctatcgatttctttgcttatatggtgtcaaatggatgcatgcccaatgaatctacctacactatgcttattaagggtttagctagcgagggattagcaaaggaggctcaagagttgctgagcgagttgtgctctaggggagctctaaggaagcacttgatgaggcattttggaattagcaattgtactcaagaaaatggaaagcagaaatgcgaagagaatctgactagtgcagtagataataattacaaacttcccattgaaatattgggctttttggagattcagaatttaaggccaggtgaaaagcaattcctcacccatttcctttcctcctcctggttctggactgctggtttgatggaagtagtagctgctgcagcagcagtttgcagtgtgctcaacatatcaggctatgaggcttccgtgccagtgacaatcgtgagttctccaatacttctccttattcttgcctcactgtattgtccgtacttgttttgtcgacaaagggatttgcatgaattatatacacagtacttgtggcttctgtctgtctcagaagtgcactag</cdnaseq>

Protein Sequence

<aaseq>MLTSSLPPPTVPGSKPRPAAATSVSTAATADAAVAGGRSGSGSG SGIGRLSALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLA AAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSG GFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK AGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL SELCSRGALRKHLMRHFGISNCTQENGKQKCEENLTSAVDNNYKLPIEILGFLEIQNL RPGEKQFLTHFLSSSWFWTAGLMEVVAAAAAVCSVLNISGYEASVPVTIVSSPILLLI LASLYCPYLFCRQRDLHELYTQYLWLLSVSEVH</aaseq>

Gene Sequence

<dnaseqindica>5..1933#2366..2489#2587..2855#gcaaatgctcacctcctcgctcccgccgcccaccgtcccgggctccaagcccaggcccgcggcggccacctccgtctccaccgctgccaccgccgacgccgcggtcgctggtggccggagcgggagcgggagcgggagcgggatcggccgcctctccgcgctcatccgctccctctgctccgcaggccgcaccgccgaggccgcgcgcgccctggccgacgcgggggacgctgcgggcgtcgtcgcctacaacgccatggtcgcggggtactgccgcgcaggccagctcgccgccgcgcgccgcctcgcggccgccgtcccggtcccgcccaacgcctacaccttcttccccgtcgtgcgggggctctgcacgcggggcaggatagccgacgcgctcgaggtgctcgacgaaatgtcgttcaaggggtgcgcgcccatcccgccaatgtaccacgtcatcctcgaggccgcgtgcaggagcggcggtttccggaactcggtgagggtcctcgaggcgatgcacgcgaagggatgcactctggacaccggcaactgcaatctcgtcctcaatgcaatctgcgagcaagggtgtgtggacgaggctgtggggctgctcaggaagttggcattcttcgggtgcgaggccgacatcgttagctacaacgcggtgttgaagggattgtgtatggccaagcggtggggagatgtggaggagctcatggatgagatggttagggtggactgcgcgcccaatatcgtgacgttcaacaccctgattggttatttgtgccggaatgggttgtttgagcgggtgcacgaggtccttgcacagatgtcggaacacggatgcacacctgacatcagaatgtacgcgactatcatcgatgggatctgcaaggaagggcatctggaggttgcgaatgagattttgaataggatgccttcgtatggtctcaagcctaatgttgtttgctacaacaccgtgttgaaaggcctgtgcagtgctgagcggtggaaggaagctgaggaattactgtctgagatgtttcagaaggactgcccccttgatgatgtgacattcaatattcttgttgatttcttttgccaaaatgggttggtcgacagggtgattgaacttcttgagcaaatgttgagccatggatgcatgccggatgtcatcacatacacaactgtaatcaatggattttgcaaagaagggcttatcgatgaagctgtcatgttgcttaaaagcatgtcatcatgtggatgcaagccaaatactgtcagttatactattgtactaaaaggtttgtgcagcgccgggagatgggtagatgctgaggaactgatgtctcaaatgattcaacaaggttgtcctccaaatcctgttacatttaatacactaatcaatttcttgtgcaaaaaagggttggttgagcaggccattgaacttcttaagcagatgctagtgaatggatgcagtcctgacttgattagttatagtacggtgattgatggacttggcaaagctggcaagacggaggaagcactcgagctactaaatgtgatggtcaataaagggatcagcccaaatacaataatttattcatcaatagcttgtgctctatctagagaaggcagagttaacaaggttattcagatgtttgacaacattaaagataccacaataaggtctgatgcagtgctctacaatgctgttatttcttcgctttgtaaaagatgggaaactgatcgtgctatcgatttctttgcttatatggtgtcaaatggatgcatgcccaatgaatctacctacactatgcttattaagggtttagctagcgagggattagcaaaggaggctcaagagttgctgagcgagttgtgctctaggggagctctaaggaagcacttgatgaggcattttggaattgtatgagctgatagtattactggcttactgccaaatgccagtgcctaatggttttggcattgccagcacaaacttgcctacttgaagctacgacagctcatgatggttcgtaggtgaaagcctataagagagttccttttttttaccacatcgtatagcataccttacggctttcatgcagtttattacagtggcatacgtaagttgacaatccaacattgtctcaagacatttctttgctagcagcatctttcttattaatgttgttgaagacactgagaattcagattcattggagctttcagagctttgtcattattgctaattgatgtatcagaaggatctacttagctgttttatgaatattgtatcagagtattatctaactttccaatttcattacaatagtaggagaaaccgtcttacatatagagcaattgtactcaagaaaatggaaagcagaaatgcgaagagaatctgactagtgcagtagataataattacaaacttcccattgaaatattgggctttttggagattcagaatttaaggccaggtgagtttgttgcttttgtgcccaaacttcatgctggttgttttggccatgccatcctccatctctaggtatcagctctcctttcttctgggatgaggtgaaaagcaattcctcacccatttcctttcctcctcctggttctggactgctggtttgatggaagtagtagctgctgcagcagcagtttgcagtgtgctcaacatatcaggctatgaggcttccgtgccagtgacaatcgtgagttctccaatacttctccttattcttgcctcactgtattgtccgtacttgttttgtcgacaaagggatttgcatgaattatatacacagtacttgtggcttctgtctgtctcagaagtgcactagttgaacagctgtaattgatgttaactagagctaatttctgttcatttttttttctgaaatgtactagttcatgtagaatttgtgctcaataatctgaaatctgatttcagttgaccgtttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0569800, RefSeq:Os03g0569800

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0569800&oldid=19641"