Os03g0569900

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0569900| Description = Similar to RNA Binding Protein 45| Version = NM_001057051.1 GI:115453830 GeneID:4333283| Length = 6150 bp| Definiti...")
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Gene Name

Os03g0569900

Description

Similar to RNA Binding Protein 45

Version

NM_001057051.1 GI:115453830 GeneID:4333283

Length

6150 bp

Definition

Oryza sativa Japonica Group Os03g0569900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21415175..21421324

Sequence Coding Region

21415541..21415543,21415651..21415821,21415911..21416007,21416268..21416398,21416474..21416529
,21419889..21420363,21420915..21421322

Expression

GEO Profiles:Os03g0569900

Genome Context

<gbrowseImage1> name=NC_008396:21415175..21421324 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21415175..21421324 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttggacggctgggacaaccttaggggcatctctccacgattttatctcatccgtttggccctgctgctgctgtgctgccccttctctagggttttgactcctaaaccgccgcccccgtcctcccgcgccgccatgatgcagccgccgccgccgccgcagtgggcaatggggccgccgcctcctccgcagtacttccaggctggccctccgccgccgccgccacagtacttccagggggcgcatccacccgctgccatgtggggccagcccccgccgccgcaggctgcccctccgccggcgccggctggtggcgcagcaggggacgaggtgaggaccctgtggatcggcgacctccagttctggatggaagagaactacctgtacaactgcttctcccaggccggcgagcttatctcagcaaagataattcggaacaagcaaactgggcaacctgagggttatggtttcattgaatttggcagccatgctatagccgaacaagttctgcaaggctataatggtcaaatgatgcctaatggtaatcaggttttcaaattaaattgggcgacaagtggtgctggcgagaagcgtggagatgatggctcagattatactatatttgttggggatctcgcctcggatgttacagatttaattcttcaagatacattcaaggcccattaccaatcagttaagggtgcaaaagttgtctttgacagaagtactggtcgttcaaaaggctatggatttgttaagtttggagatttggatgaacagacacgtgcaatgactgaaatgaatggacaatattgttctagcaggcctatgcgtattggaccagcatccaacaagaaaaatataggtggccaacaacaaccaagtgctacataccagaatacacaaggaacagattctgatagcgatccaaacaatactactgtatttgttggtggtcttgatccaagtgtgactgatgaggttctgaaacaagccttcagtccatatggagaacttgtctacgtcaaaatacctgtaggaaagcgttgtggatttgttcaatattccaatagggcttcagctgaggaggccataaggatgctaaatggaagccaattaggaggtcagagcataaggctttcatggggtcgtagccctggaaacaagcagcctcagcaagaccagaaccaatggaatgctggctattatggatatcccccccaaggatatgatccatatggttatgttcggccgcctcaagatcctgccatgtacgcttatgcagcatatcctggatacgggaattatcaacaaccagcgccacagcagccccctcaacagtaa</cdnaseq>

Protein Sequence

<aaseq>LDGWDNLRGISPRFYLIRLALLLLCCPFSRVLTPKPPPPSSRAA MMQPPPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPPPQAAPPPAPA GGAAGDEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFG SHAIAEQVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDL ILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPM RIGPASNKKNIGGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSP YGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQ DQNQWNAGYYGYPPQGYDPYGYVRPPQDPAMYAYAAYPGYGNYQQPAPQQPPQQ</aaseq>

Gene Sequence

<dnaseqindica>5782..5784#5504..5674#5318..5414#4927..5057#4796..4851#962..1436#3..410#tattggacggctgggacaaccttaggggcatctctccacgattttatctcatccgtttggccctgctgctgctgtgctgccccttctctagggttttgactcctaaaccgccgcccccgtcctcccgcgccgccatgatgcagccgccgccgccgccgcagtgggcaatggggccgccgcctcctccgcagtacttccaggctggccctccgccgccgccgccacagtacttccagggggcgcatccacccgctgccatgtggggccagcccccgccgccgcaggctgcccctccgccggcgccggctggtggcgcagcaggggacgaggtgaggaccctgtggatcggcgacctccagttctggatggaagagaactacctgtacaactgcttctcccaggccggcgaggtgacgcgcctttccttatccaccttttttttgctgttgttgttgatggtgatgctgtgtttctggttacaaaattatactttgtgtttggcaagagtaatatcactagcttccttttgggtgctcggtaaaaaagggggacttttcatcagctatgtttggatgctcagtaaaaaaaggatcttttgatatgataaatcaatgttacccgatttggacactgaagttccgtcctttatttagtcagtttctaattttaggtctggtgggaatgggtgtgctgatagattcggttggatgtttacctaatttatacaggaagcagaggtcttctaagttaagagtgccatgaataccacatgctctgatgctgtgttagtgtgtgggcaatggtttttcttacatagagaaaaaaaatgccagtcttttttagcatgcttgttttggatacacctgaacaaatttgctgcctgaatttgtaattgcttgaactgttcacttcagatttgggatttacttttaacgctttgttgacattggtcattgatcagcttatctcagcaaagataattcggaacaagcaaactgggcaacctgagggttatggtttcattgaatttggcagccatgctatagccgaacaagttctgcaaggctataatggtcaaatgatgcctaatggtaatcaggttttcaaattaaattgggcgacaagtggtgctggcgagaagcgtggagatgatggctcagattatactatatttgttggggatctcgcctcggatgttacagatttaattcttcaagatacattcaaggcccattaccaatcagttaagggtgcaaaagttgtctttgacagaagtactggtcgttcaaaaggctatggatttgttaagtttggagatttggatgaacagacacgtgcaatgactgaaatgaatggacaatattgttctagcaggcctatgcgtattggaccagcatccaacaagaaaaatataggtggccaacaacaaccaagtggtaaagctttctttcacagctagttcctacttttgaatatttcattagaaatgtaaacattttattcagtgagatgatatgataattcgcaatagatcaagcatttttgtgctacttgctgtttatcataacattgtttgcttggaaagaagggaccgtgttccttgtttcgatggttatggtcgaagtctagagtgtcacttcgatagttaggtagtttagttgatatgcaatgttttagtgtggctgtactaaaaactgcaacatctgcaatttggaatgtttggtcaaccagttggatcagatgggccagcatatggtatatggagacttggaagcgttaactagcagactgcctctgtgactgtatgcgtgctaccaccaagtagtaaatgagtatgttggggtcaaaacaaaggagaggaaataggagggaggcagagggatttgaatatgtgataggaaaaatttatattcacttctctttgtctttttaccatatatcatctgagaaggaaactactatgtatgtaaccttgagagttgagatacctggaaattcacatatagtatctcaagtctcaacacactggatatagaatgattacagataaaatcaaattttctgatcaatacaattgtcaatctaataactgcttagattgaacaaatcctaataaagcgatgaagtttaaccaaagatgctcgttgaaacctgtctatgtctatttggctactaaacccatccaattatgcatagactatgccaaacacattaattcattgaggatgtaccaaaatgaatatagcaaatgccaaactgtagtccaccatgataatgatcttgtttatgcagtaaaagtgcataaataatatgccaaatctggagatcatatgcaatgtatactcttaatgatgaaaatcctggtgcagctttgattttctagatacttgtaagtgattttttgatatcccatttatcttcttttcatatttgccatttcataattgctatgcaagggttcttttgtgacataagatatctcaggtgtgattcaatacttctatttttaaattatgtatgaatggacatgattttctatcactgttctaaatggcggtattaggcagcgcttaggcggcgatttggtgctaggcggagggcagccgccacgatttgcccctaggtggcaagttaggtgggtgacccgcctcggcgagcgtcgagaccgtgaggcgggcgccttgtgcgaccagtctgctcgtggggagaaaaggtcacaggagagagatgggaaggcacagatgtggcagaggaggtgcgtggctgcgtacggcacgcgttgcggtgtcgagtagatgaaaggatcagaagaaaattagggttccgaagggaaagagtacagcccataagtacagtacctaaaggttctttcctgctagcctccttattctctttcttcacagccggcggatcagccacaatcacggtgcaacttgttcttcgacagcagcggccaagttgagggcacacggcgacgggttggccttctcttcttccctcttaatctctcaccatcttttcctttcatccaagcctctcaccctctttccctcctttttctcatcttctcctccatatcccactgttttagaaagggaacctaggcgccgttgaggcgggctaggcgctagtcggcaccttgccacccaaccagtgttcttaaggcgacaaggcgaggcaaggcgacccaccgctgctcaattgcctaggcgacgccttaagcatttaaggcgagggtaaggcgactagagatatatgaggcaaaagagaggaagaacatgaatgggcgaggaagagcagggagacagatccattggagacgaagggagcagcaggagggagacaaccatcttctctttccatctttcccagtcgctatgtttccaatctatgcccgccctctattctctttccatctttcacccttccctctccctaaattggcacacctattctctattctctttccacctttcacccttccctctccctaaattgtcgcacatgcgatttccatcctatcttcacgtgatttccttcccagcatgcataaattcccaacagcacatgcacccttgacccccaccttgcctgtgtctacctgatttcatgagatattaggatccaagatgtgtagaagggtaagtggtggggacgttctgctccctgatggcgctcacacgcctaggcgtcgcctaggcaacgcttaagcgacgctttttaaaccatgcgcccaactagcgcttagcgccttctccaacactgttttctatgaatagcttattttacaagcagccaaaactattgcgagttaacatttatgccatgtcatcatatcatttcatgttatctccagcatgatttactccattggatacattgggtgctcgaactggacatactggtgtatcatcatattggtgttaaataacagcactgtagcggcatatatgtgtatcacctatctgggcaacctagggaaacagactaagacaaagatctgacataggttgatgttccttttagagtaaattgcattttgggccacatattcttcccaaagtttcactttggactaggtattgttgccaagtcttatcactttggaccaggtggcccacatgtcaatgagactaaccacctctattgtccatgtgtcacttacatgtgagccacctagtccaaagtgcaacatttggcaacaatacctagtccaaagtgaaaaacacattgtaagggtggtccaaagtgaaactttggtaagaatatgtggctcagagtgattcaatatttaaatggataatcaaaggtgtgccacaattactgactttaaaaagaaatatctaccacaaatggataatcgaaggtgtgctgtaattactaactttgaaaaagaaatatctaccacaccattgattatccataacattgaatcatcaacatagaaagaacatcaacccctagtccgatcgtcttttgtcgtactctattactttatctgctcctatgttcttgtcgtacaagtttgtcttttattcctcttttcgtgccatgttataatttttagctgtacaaaattatatactgctaggactattgcagggccataatagcgtatttttgcacattgatagcctcatagccaagtggtgtacttgcatttttaccatccatatctgttgagataacaaattttgacaggacacaagataacaagttccatattatggtgttaatgctgatattcaactatatctggcatgcatagtcttactcttgtttctgttttctgcagctacataccagaatacacaaggaacagattctgatagcgatccaaacaatactactgtgagtacatagttatttatttttaagataaccacaaaggcttgtttaattggacaattgctatgttgcttgcaggtatttgttggtggtcttgatccaagtgtgactgatgaggttctgaaacaagccttcagtccatatggagaacttgtctacgtcaaaatacctgtaggaaagcgttgtggatttgttcaatattccaataggtatctgagttcagtatgatttaatgcagataaacttgctggcaccatcacttaagtaaccatatcgtgcttagatttctttgcagtagagcatccaattgcatatgtcttgcactaagtaggaccatagggttccagtgtgaaatttgaacccacatgaaggaactgtgcaaaattaaacgattattatgtattttgatcttgaatcaactcgccgctcccttgatttcttttctgagtcatgtatttcatatcttcagggcttcagctgaggaggccataaggatgctaaatggaagccaattaggaggtcagagcataaggctttcatggggtcgtagccctggaaacaagcaggtagcttttgtatgcaattagtgtacccaccactgcagaaataaagtaaaataaacaaaactaagtttctttaatgaattttcaagcagcctcagcaagaccagaaccaatggaatgctggctattatggatatcccccccaaggatatgatccatatggttatgttcggccgcctcaagatcctgccatgtacgcttatgcagcatatcctggatacgggaattatcaacaaccagcgccacagcagccccctcaacaggttaaggcactctaggattccacactggatatggaattttacattgcttactcttgcacagataaaagtgacagttttctgttttttttttccttccgcttttgcagtaagaacaagtgttggtcaagtgccctatcacaacatatgatgaaatagttttggcaactttggtgtaattggcatgaaaattttttgaactgttgcttgtgctatctttgttgaacgtcgtgtgcacgcccagcctatgttgtaacatgacattttactgaggcctaggtgacactagaatgacagcttttagggagggagtattggagtgaacatttttcgcttgctcaaaaagttttgtcgccatgggtaccattagaagaggagttgagcaagaaataataagtttgtaacattagacatcggcgtacattttaatcgggcactttggtattattgcactggagccgttttctgtttgcgtccct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0569900, RefSeq:Os03g0569900