Os03g0572800

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0572800| Description = Conserved hypothetical protein| Version = NM_001186576.1 GI:297722282 GeneID:9271740| Length = 4590 bp| Definition ...")
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Gene Name

Os03g0572800

Description

Conserved hypothetical protein

Version

NM_001186576.1 GI:297722282 GeneID:9271740

Length

4590 bp

Definition

Oryza sativa Japonica Group Os03g0572800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21624240..21628829

Sequence Coding Region

21624240..21624356,21624456..21624878,21624957..21625178,21625257..21625718,21625800..21625960
,21626082..21626633,21626716..21626785,21626801..21626886,21626966..21627386
,21627662..21627700,21628761..21628829

Expression

GEO Profiles:Os03g0572800

Genome Context

<gbrowseImage1> name=NC_008396:21624240..21628829 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21624240..21628829 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaacgcccggcgcaaacccgccctccccaacacctgcgaggatccaggaagaacggagacagttgccgaaggtcatccttcgacaacggcggtcgaacaacccgaaattcatggaacaacatacgtcgatgtcgggcgggacaagtgcaagtaggtctagtagaaatccccgatcacaaaatatatggccgaccacagtgcaagttataagagaggttgacgctagtggtaggcccacggcacccaggactgtcattggaagatggtctaactgctgcgggctagcggcacgtgagaacttcgggatcctccataaagatatcaggaaggtcacagaagccgagaaagagcgagcttggacggcaatggagaaatggttcacatttctggctgaagcaaaggataggctcaagcggaaggcattccaaaagatgggcaaagcttggaagaattggaagtctaagctcttcaccgagtttgtcaacccacccggcaatcatacgccgttcgatgaatattctcaaataaccgaagcgcggaatgagcacccgcatcggctgggcaccgcagggtacatcggcaaggaggcaatatgggcccatgaagatgcagccgctacagcagcgaatgtccctgccccgttttcagacatccctgaacaaagagctcgcaactgggcgcgggcaaggggtaaggtcaacccggacggctctgtcacatttgagaacaaaagtgatgccgtcgtctatcaggaactgttgggctcggttgctaaacaagcttcacaaagcgaggttgagtccgcgccgaagaggcgcaaagatgacatcctcacaaaggcgctcggaaccaaagaacatcctggcctgactcggggaattggtagtgatgtgccctgggagcatggactccctcagtacagctcccaatacaggaaacggaaagtctccaaggaagagagggacgctcgtttgaaggccgaacttaaggttgaggtcattcaagaactagaagctagcatgaatgcaagggtggaagaaagggttaataaggtcctcgccgacatgaatataccccgagtcacaacacctgctgtgcatccaactcctcgtgcacaacacgacgcgagtccgtcacagcataggagtagttgtgcatccacagaggtgccggcccctggtctcccgatcgcaccactagctgcagtggaccacatcgagggcgcagcacagtgtgtcctactagcgagagtccacccaacttttgctcctgaagtcgctgagggcatggctttcaagccctcggttacagacaaggtccacagcgcagacctgctagctgggtatgccaaggtgtccatcgatacagtaaaggacacatgtcgaccgacggagcttacacctcccaagtctaagctatcaattgaggctccccatggaccggcattgtcagtacctcattctcctggtggagctgatatggacttggcagatatagctcaaagcttggctccaataaagaccacaagaaaggccgatagctccccaccacttgtcaaaggcaagaagcgtgaacgcggcaaggggaaggtcggggagttggcgccggagccaaaaaggggcaaggctgcgacgtcgatgccggtgagcaaagcagggaaggtcgtgagggcgccagcccaatttgagctaggtatgccattggtggaggacaatgtgttagccgtgatgggtattgcttgccgagagctacataagcaatacaaggagctaagcaataccaagcggaaaatgagggagtcatccatagttggacatcacgatcaccagccgttcctatcgtcgcctgcctatataactataggctttgatgacctcttcgaccttttcaggatccggaagttggacactggtcttctaaaatactacaccttgttgtgttggatcgagagtcgtcgccttggtaatcaggttgggttccttgatccatccatggtgaacgagagcttcactgaggtggttgactatgtcaaccggtgtttatgggcccatcaagacaaggagtacatcatatgcgcacacaaccaagagcgacattggattctcctagtcatcgtacctaagtggagtagagttacctaccttaactccaataagtccaaagattatgatttcagtgaaatcaccaaggccttaaatatggcttggggcccatatgtggaaaagggtggtaggcacaaggagggcaaggacgaactttatcatgacaccaagtttgcatgcccacaacagattggagaccaatgtggtttccacgtgtgccacaacatgtcaacacttctaagagaggtgaaagatttcgaccctgaggttgttgctaatggcgaaaaagctcatttcaatacctacattgctattcaaaacgtgctaattaacctcttatttattaaacagaaaggtagagctggcttcaagatctcacctatcaacccccccgctatcagaggcgaagttttggaggtcgatgacattatggctttaatccatttgtttccctctgcatgcgccatgctggtagaaaatatcaaagcaaatgctggcgacgtgggggatagttga</cdnaseq>

Protein Sequence

<aaseq>MATPGANPPSPTPARIQEERRQLPKVILRQRRSNNPKFMEQHTS MSGGTSASRSSRNPRSQNIWPTTVQVIREVDASGRPTAPRTVIGRWSNCCGLAARENF GILHKDIRKVTEAEKERAWTAMEKWFTFLAEAKDRLKRKAFQKMGKAWKNWKSKLFTE FVNPPGNHTPFDEYSQITEARNEHPHRLGTAGYIGKEAIWAHEDAAATAANVPAPFSD IPEQRARNWARARGKVNPDGSVTFENKSDAVVYQELLGSVAKQASQSEVESAPKRRKD DILTKALGTKEHPGLTRGIGSDVPWEHGLPQYSSQYRKRKVSKEERDARLKAELKVEV IQELEASMNARVEERVNKVLADMNIPRVTTPAVHPTPRAQHDASPSQHRSSCASTEVP APGLPIAPLAAVDHIEGAAQCVLLARVHPTFAPEVAEGMAFKPSVTDKVHSADLLAGY AKVSIDTVKDTCRPTELTPPKSKLSIEAPHGPALSVPHSPGGADMDLADIAQSLAPIK TTRKADSSPPLVKGKKRERGKGKVGELAPEPKRGKAATSMPVSKAGKVVRAPAQFELG MPLVEDNVLAVMGIACRELHKQYKELSNTKRKMRESSIVGHHDHQPFLSSPAYITIGF DDLFDLFRIRKLDTGLLKYYTLLCWIESRRLGNQVGFLDPSMVNESFTEVVDYVNRCL WAHQDKEYIICAHNQERHWILLVIVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPY VEKGGRHKEGKDELYHDTKFACPQQIGDQCGFHVCHNMSTLLREVKDFDPEVVANGEK AHFNTYIAIQNVLINLLFIKQKGRAGFKISPINPPAIRGEVLEVDDIMALIHLFPSAC AMLVENIKANAGDVGDS</aaseq>

Gene Sequence

<dnaseqindica>1..117#217..639#718..939#1018..1479#1561..1721#1843..2394#2477..2546#2562..2647#2727..3147#3423..3461#4522..4590#atggcaacgcccggcgcaaacccgccctccccaacacctgcgaggatccaggaagaacggagacagttgccgaaggtcatccttcgacaacggcggtcgaacaacccgaaattcatggtaatttataggataaattttcaccacatgaccacataaattttagctagcaccccttagcaaatattgccttctgtttgtgctgcagaattgccgcaggaacaacatacgtcgatgtcgggcgggacaagtgcaagtaggtctagtagaaatccccgatcacaaaatatatggccgaccacagtgcaagttataagagaggttgacgctagtggtaggcccacggcacccaggactgtcattggaagatggtctaactgctgcgggctagcggcacgtgagaacttcgggatcctccataaagatatcaggaaggtcacagaagccgagaaagagcgagcttggacggcaatggagaaatggttcacatttctggctgaagcaaaggataggctcaagcggaaggcattccaaaagatgggcaaagcttggaagaattggaagtctaagctcttcaccgagtttgtcaacccacccggcaatcatacgccgttcgatgaatattctcaaataaccgaagcggtgtgggaggaattctgctctctcaagaacacccaagagtttagggaatcaagggaggcacatggcctactgtaacagcggaatgagcacccgcatcggctgggcaccgcagggtacatcggcaaggaggcaatatgggcccatgaagatgcagccgctacagcagcgaatgtccctgccccgttttcagacatccctgaacaaagagctcgcaactgggcgcgggcaaggggtaaggtcaacccggacggctctgtcacatttgagaacaaaagtgatgccgtcgtctatcaggaactggtgagttcactacttaacctaactaatttccgttcatataaagtacaagttcatataaacgactattttcttttctagttgggctcggttgctaaacaagcttcacaaagcgaggttgagtccgcgccgaagaggcgcaaagatgacatcctcacaaaggcgctcggaaccaaagaacatcctggcctgactcggggaattggtagtgatgtgccctgggagcatggactccctcagtacagctcccaatacaggaaacggaaagtctccaaggaagagagggacgctcgtttgaaggccgaacttaaggttgaggtcattcaagaactagaagctagcatgaatgcaagggtggaagaaagggttaataaggtcctcgccgacatgaatataccccgagtcacaacacctgctgtgcatccaactcctcgtgcacaacacgacgcgagtccgtcacagcataggagtagttgtgcatccacagaggtgccggcccctggtctcccgatcgcaccactagctgcagtggaccacatcgaggtaattattgttatccgatccatatctaataaaaaacctttacacgtttcaatattaaattcaaactttcaccttatgcagggcgcagcacagtgtgtcctactagcgagagtccacccaacttttgctcctgaagtcgctgagggcatggctttcaagccctcggttacagacaaggtccacagcgcagacctgctagctgggtatgccaaggtgtccatcgatacagtaaaggacacatggtcaggctatccgctgcccgtgccccccaatgatgaaatcatgactttgggcgatgcgcgcaagacgttcatacaatggccccaaagaagacatagttgtgaagatgactcctcgtccaagtcgaccgacggagcttacacctcccaagtctaagctatcaattgaggctccccatggaccggcattgtcagtacctcattctcctggtggagctgatatggacttggcagatatagctcaaagcttggctccaataaagaccacaagaaaggccgatagctccccaccacttgtcaaaggcaagaagcgtgaacgcggcaaggggaaggtcggggagttggcgccggagccaaaaaggggcaaggctgcgacgtcgatgccggtgagcaaagcagggaaggtcgtgagggcgccagcccaatttgagctaggtatgccattggtggaggacaatgtgttagccgtgatgggtattgcttgccgagagctacataagcaatacaaggagctaagcaataccaagcggaaaatgagggagtcatccatagttggacatcacgatcaccagccgttcctatcgtcgcctgcctatataactataggctttgatgacctcttcgaccttttcaggatccggaagttggacactggtcttctaaaatactacaccttgtaagtgcataccttctatacttgtgatatgattggactatatctcctaattaaattagttctaatacgtaaatgttttaaggttgtgttggatcgagagtcgtcgccttggtaatcaggttgggttccttgatccatccatggtgaacgaggttaatttacaatagagcttcactgaggtggttgactatgtcaaccggtgtttatgggcccatcaagacaaggagtacatcatatgcgcacacaaccaagagtaagaggccaatacccttcatgtatactatttttgaagttaaggttcttagtactaacgctacataaccactgcgcaggcgacattggattctcctagtcatcgtacctaagtggagtagagttacctaccttaactccaataagtccaaagattatgatttcagtgaaatcaccaaggccttaaatatggcttggggcccatatgtggaaaagggtggtaggcacaaggagggcaaggacgaactttatcatgacaccaagtttgcatgcccacaacagattggagaccaatgtggtttccacgtgtgccacaacatgtcaacacttctaagagaggtgaaagatttcgaccctgaggttgttgctaatggcgaaaaagctcatttcaatacctacattgctattcaaaacgtgctaattaacctcttatttattaaacagaaaggtagagctggcttcaagatctcacctatcaacccccccgctatcagaggcgaagtgtgcgccttcattcttgcagaaataatgaacaagaaaggacgttttcatgtcaaatagactcatgaacttggctagataatttattgtgatgtaaaaaatatgtttttataatttcttgtgatgtaaaaaattatgtttttatggggtgcaatgtaatttactttcatatgtgcaatatttatggtagtttactaaattgtcatcacatttgatcaactacgatttacgttgtactattcatctgttttctccttttttttccttattgacaggttttggaggtcgatgacattatggctttaatccatttggtaagtatatatgcggttctatgagcaatgaccgaaattgtggctttcaaggggtgtgaatttgctgtgcaaaattgtggcatttgaactgcatatatgtgttgttggggatctgtgatgtttgagatggatctgtgatgttatattgggggggtgatgtatctgtgactggaatatatctgtgatgtatctgtgtttcaaagggcatggctagcaaatcctgaggctagccaatatttagcatttattttttttctggaattaactcattagtgacgagtcggaacaaaaatccgtcaaaggtaacctaacctgtgacggactagcaagtaaggcccgtcagaggtgacctacctgtgacgggcctttacttttggggccgtcacaggtagatcacctgtgacagcttctaactacggagaccacaacctctgacggcctttatttaaagggccgtcagagatgagtcacctgtgacgggtcctaactcgccctaggctagcggagaccaacacctctgacggccttctagtaacttgcccgtcagagatgggtgtcacctgtgacggccggccacccgtcaaaggtgactggactcaccagtgaccactgatcactgaccacgcgcgaagccgtcaaagatgagggtttgggcctgtcacaggtgaccttggccagtgtagtggttgtgagtggatgtgttttgtttcgttagttatatgttagatgtgtgagtcgaagcactaagttgtgttttgtggtgcttgtttccttttgcaaggagtgagtctaagtactcttgtactgtttttggctttgtacatccaatttggatgtagaggcccagtttttaatccatttctaaaaacagttcactttaccactcccattctagttctactgcaaaatttctgaggtttcagtaggcatcgttccacatctccagatgtcccaaaaggaagtaaaccacatgacctaatgttattgtaaaccagatttgagctcaatgaagcacatctttcactggtctcccaactcggatatatgcctgatcctgcagtttccctctgcatgcgccatgctggtagaaaatatcaaagcaaatgctggcgacgtgggggatagttga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0572800, RefSeq:Os03g0572800