Os03g0573500

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0573500| Description = Disease resistance protein family protein| Version = NM_001057060.1 GI:115453848 GeneID:4333292| Length = 3801 bp| ...")
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Gene Name

Os03g0573500

Description

Disease resistance protein family protein

Version

NM_001057060.1 GI:115453848 GeneID:4333292

Length

3801 bp

Definition

Oryza sativa Japonica Group Os03g0573500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21673762..21677562

Sequence Coding Region

21673762..21677562

Expression

GEO Profiles:Os03g0573500

Genome Context

<gbrowseImage1> name=NC_008396:21673762..21677562 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21673762..21677562 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccatcgacgttcggatggtcggcgtcggcgttcgtcgcggccgtgctcgcccgcctcatcggcaagggcctcgcgctgctcgcggagctcgacgacgccgcggcaggccacctccggcgcctcgaggccctcctcgcccccgtctggcgtgtcctcgacgccgccgacgccggcgccatcgacgttgtcggccaccggcgccctcttcaggaccttctcgacgccgcgtatgccgctgacgacgccctcgacgacctcgtgctgctccagtccgacgcgatggcgagaggcggggagcacggtgtcgacgcccgcgggacgcccgccgccggcgcggcgaggaagcccaagccgtgcagcccgctcaggttcctgctctgcttcagcccacccagaaatgccgttgctagcagcagcagcagcagcagcggcagccatggcaaaagctcaaaggggaacaagagtaatcctgacctgcgtggcttaggagttgcgtttgagatgatggcacaagctgcgtacaggtgcacgtcggcgtacgagcacgtcgtggcagggaagaactacgccacgatggtttcagcacaagcagaggctgcaacagcagcggaagcagctgattatgatcagtttcagaatgacatatttgggagggaaactgaggtggagcagatcttggagaaggtgaggttcagcgacgacccgcattaccggctagggatcggtgttctcccaatcgtcggcgtcgagggggtgggcaagacggcgctcgcgcagttcatcttccactacgaggtcgtcaaggccgagttccccgtgcggatgtgggtgcacgtctccggcgaggtccagctcaaggacgaactcgtggtccagatgatccatggtgttgccggagatgcccatgaagtcgaagacatcagggagatccttcacgaggagttgaccggcaagaggttcctgcttgttcttgacgatgttagcgatgtcggcgacatccagtggaaagatctaatgaggcttctgcaacctgcagccaggaggagcatgatcatggtgacaactcaatctgaaattgcagcaaatgcgataggaacaatgcctccattaatactgaatccattggaatctgaggattaccagaagatgttcagacacttcgcatttggcagctctgatgagtctgaagattacactccactgggagacgaatgggacgacgttgaagacgaagacgaggaagagaagcagtcaccgatggagaaggttgcattggagctagccaagaagatgggcggcctaccattaccagcgacggcgattgcacgggctctgtttttccgccgggaagacaaggagcactggaaaaacgtgctggaagacaagctctgggagcagcgagacgtcgccggcatctcgccggcgctgtggctgagctaccaacacctcgatcctcgcctcaagcaatgcttcgcatattctgcagtgtttccatgtagccatgccttcacaaaggatgaactggttcagatgtgggtagcacaggggctgatatattctgaagatgccgtggcgaggcctgaggacattggaagcaagttctttgaagatttggttgaaagatgcttctttcagccaattggaagcagcagatatgtggtacacaattcgatgcgaaaactagcacaggcagtctcaacagatcagttcttcatggtcaccgagagctcaggagacgtgccactagaagttcgtcacctgaccatcatgacaaacaacctctccaagctgataaatgatctgtcattgaagatatctcattcatctggatctgaccaacacttcctccaacggattcgtacaattattttctttgcagatttcagtaattcagatgaatttatcgaatttctcgctgatattttcaaggtagcaaaagatgtgagagttcttggtgtgacatatgcaaatatagcatttttgcctgctgagattggctttctccgacacctccggtatctgaatctgctcgggaacagaatagcagatcttcctgagtcagtttgtgatctccacctcctccaggttctggatgtgcgctgcagttctccttatctccgtgctcccaatggcatcaccaatctgatttatctgaggcatttgcatgcaagtgagccttttctttctatcataccaaaaatacagaatctctcacatttgcaagaattggaggtgtacaaagttagcagtatttcgcgcatcgacgccttacaagggatgacacaactccgaggtacactttgtcttaaagatctccatcaggttgatgttagtgagctaaggaagggcatcttgaagggtatgcaacatctgaacatattagagttgtcatggagcagctctgatagccaaagcagagaggcttccacagatgaagacacacttgagtgcttgcaaccacatgagaacctgaaagatctgagaattacaggctacagaagcactaaatgcccatcatggatgctaaagactccttgttctctatcaaatgctacttcagttttcttaacggattgcgtgaacctgaagaatctccctccattccatatcatgccctgccttgagattctcgagatgagaaaaatccattctgtcaacaaggtgaacactgttcctcaacgatcagatcagatcatgttcccaaagctcaaacgccttgttttcgaagatgtgttgaactgtactgaatggtcgacaggcagctcaaaatcaagaaacaccgtatttccctgcctctgtgaaatccagataaggaactgcccaaagctgagaaactttcctgaccttccacttacactgacaacaatgatcattgagaatgttggtcttgaaacactaccaaggatacaggacagacattcattaccaccatcatcatcatcagatgcgattgcaacatcgaaagaaggcagatggacatcaaggctcacaacactacaaatacatcagtgtcacgggctgaaatctctaggatcaagcctgcttcagcagcagcacctcctaaggtccctcgaggtcttgtcaataaagaactgcgacaacgttacgtgtgatctctctgacggttttcaggacctcactgcattgacagacctatcactatacgattgcccgaagcttctagtcgacaagttccacacatcgctgcgaaagctagagatcagcgaatgcttcatcacacatggggcatgggtggatgactaccccttcctgttctcagtgtggacactaaaggttaccagttgtcctcatgttagcactgatcaggaaagcagcttcagcatcgaacctctggattggttgaactgcctgttcaatgtgtgcagtcttcacctggagaacacattgcttctgaaactgagcatgtttaacaggcttcgctctcttgagatcctagagatcgacgggagtcgctcattcttcgatgatttggtagaggaatttgagtggctggagaagctgcaggctctgagcattagaaactgcaaggaattgagaatgcttccagcgaatatctctactctgcctgtgttggaagaactctgcatagaaaactgtccagctttggaggcgttgcctgcgagtggtctgcctacttcgctgaagagattgtcaatatcgaaatgcagtccacggttaactcaacgatgtcttgatgatgaacctgataatctgaatattgcaaagattgctgttgtttacattgatgggcaatgtattagtattcaacaaaaataa</cdnaseq>

Protein Sequence

<aaseq>MPSTFGWSASAFVAAVLARLIGKGLALLAELDDAAAGHLRRLEA LLAPVWRVLDAADAGAIDVVGHRRPLQDLLDAAYAADDALDDLVLLQSDAMARGGEHG VDARGTPAAGAARKPKPCSPLRFLLCFSPPRNAVASSSSSSSGSHGKSSKGNKSNPDL RGLGVAFEMMAQAAYRCTSAYEHVVAGKNYATMVSAQAEAATAAEAADYDQFQNDIFG RETEVEQILEKVRFSDDPHYRLGIGVLPIVGVEGVGKTALAQFIFHYEVVKAEFPVRM WVHVSGEVQLKDELVVQMIHGVAGDAHEVEDIREILHEELTGKRFLLVLDDVSDVGDI QWKDLMRLLQPAARRSMIMVTTQSEIAANAIGTMPPLILNPLESEDYQKMFRHFAFGS SDESEDYTPLGDEWDDVEDEDEEEKQSPMEKVALELAKKMGGLPLPATAIARALFFRR EDKEHWKNVLEDKLWEQRDVAGISPALWLSYQHLDPRLKQCFAYSAVFPCSHAFTKDE LVQMWVAQGLIYSEDAVARPEDIGSKFFEDLVERCFFQPIGSSRYVVHNSMRKLAQAV STDQFFMVTESSGDVPLEVRHLTIMTNNLSKLINDLSLKISHSSGSDQHFLQRIRTII FFADFSNSDEFIEFLADIFKVAKDVRVLGVTYANIAFLPAEIGFLRHLRYLNLLGNRI ADLPESVCDLHLLQVLDVRCSSPYLRAPNGITNLIYLRHLHASEPFLSIIPKIQNLSH LQELEVYKVSSISRIDALQGMTQLRGTLCLKDLHQVDVSELRKGILKGMQHLNILELS WSSSDSQSREASTDEDTLECLQPHENLKDLRITGYRSTKCPSWMLKTPCSLSNATSVF LTDCVNLKNLPPFHIMPCLEILEMRKIHSVNKVNTVPQRSDQIMFPKLKRLVFEDVLN CTEWSTGSSKSRNTVFPCLCEIQIRNCPKLRNFPDLPLTLTTMIIENVGLETLPRIQD RHSLPPSSSSDAIATSKEGRWTSRLTTLQIHQCHGLKSLGSSLLQQQHLLRSLEVLSI KNCDNVTCDLSDGFQDLTALTDLSLYDCPKLLVDKFHTSLRKLEISECFITHGAWVDD YPFLFSVWTLKVTSCPHVSTDQESSFSIEPLDWLNCLFNVCSLHLENTLLLKLSMFNR LRSLEILEIDGSRSFFDDLVEEFEWLEKLQALSIRNCKELRMLPANISTLPVLEELCI ENCPALEALPASGLPTSLKRLSISKCSPRLTQRCLDDEPDNLNIAKIAVVYIDGQCIS IQQK</aaseq>

Gene Sequence

<dnaseqindica>1..3801#atgccatcgacgttcggatggtcggcgtcggcgttcgtcgcggccgtgctcgcccgcctcatcggcaagggcctcgcgctgctcgcggagctcgacgacgccgcggcaggccacctccggcgcctcgaggccctcctcgcccccgtctggcgtgtcctcgacgccgccgacgccggcgccatcgacgttgtcggccaccggcgccctcttcaggaccttctcgacgccgcgtatgccgctgacgacgccctcgacgacctcgtgctgctccagtccgacgcgatggcgagaggcggggagcacggtgtcgacgcccgcgggacgcccgccgccggcgcggcgaggaagcccaagccgtgcagcccgctcaggttcctgctctgcttcagcccacccagaaatgccgttgctagcagcagcagcagcagcagcggcagccatggcaaaagctcaaaggggaacaagagtaatcctgacctgcgtggcttaggagttgcgtttgagatgatggcacaagctgcgtacaggtgcacgtcggcgtacgagcacgtcgtggcagggaagaactacgccacgatggtttcagcacaagcagaggctgcaacagcagcggaagcagctgattatgatcagtttcagaatgacatatttgggagggaaactgaggtggagcagatcttggagaaggtgaggttcagcgacgacccgcattaccggctagggatcggtgttctcccaatcgtcggcgtcgagggggtgggcaagacggcgctcgcgcagttcatcttccactacgaggtcgtcaaggccgagttccccgtgcggatgtgggtgcacgtctccggcgaggtccagctcaaggacgaactcgtggtccagatgatccatggtgttgccggagatgcccatgaagtcgaagacatcagggagatccttcacgaggagttgaccggcaagaggttcctgcttgttcttgacgatgttagcgatgtcggcgacatccagtggaaagatctaatgaggcttctgcaacctgcagccaggaggagcatgatcatggtgacaactcaatctgaaattgcagcaaatgcgataggaacaatgcctccattaatactgaatccattggaatctgaggattaccagaagatgttcagacacttcgcatttggcagctctgatgagtctgaagattacactccactgggagacgaatgggacgacgttgaagacgaagacgaggaagagaagcagtcaccgatggagaaggttgcattggagctagccaagaagatgggcggcctaccattaccagcgacggcgattgcacgggctctgtttttccgccgggaagacaaggagcactggaaaaacgtgctggaagacaagctctgggagcagcgagacgtcgccggcatctcgccggcgctgtggctgagctaccaacacctcgatcctcgcctcaagcaatgcttcgcatattctgcagtgtttccatgtagccatgccttcacaaaggatgaactggttcagatgtgggtagcacaggggctgatatattctgaagatgccgtggcgaggcctgaggacattggaagcaagttctttgaagatttggttgaaagatgcttctttcagccaattggaagcagcagatatgtggtacacaattcgatgcgaaaactagcacaggcagtctcaacagatcagttcttcatggtcaccgagagctcaggagacgtgccactagaagttcgtcacctgaccatcatgacaaacaacctctccaagctgataaatgatctgtcattgaagatatctcattcatctggatctgaccaacacttcctccaacggattcgtacaattattttctttgcagatttcagtaattcagatgaatttatcgaatttctcgctgatattttcaaggtagcaaaagatgtgagagttcttggtgtgacatatgcaaatatagcatttttgcctgctgagattggctttctccgacacctccggtatctgaatctgctcgggaacagaatagcagatcttcctgagtcagtttgtgatctccacctcctccaggttctggatgtgcgctgcagttctccttatctccgtgctcccaatggcatcaccaatctgatttatctgaggcatttgcatgcaagtgagccttttctttctatcataccaaaaatacagaatctctcacatttgcaagaattggaggtgtacaaagttagcagtatttcgcgcatcgacgccttacaagggatgacacaactccgaggtacactttgtcttaaagatctccatcaggttgatgttagtgagctaaggaagggcatcttgaagggtatgcaacatctgaacatattagagttgtcatggagcagctctgatagccaaagcagagaggcttccacagatgaagacacacttgagtgcttgcaaccacatgagaacctgaaagatctgagaattacaggctacagaagcactaaatgcccatcatggatgctaaagactccttgttctctatcaaatgctacttcagttttcttaacggattgcgtgaacctgaagaatctccctccattccatatcatgccctgccttgagattctcgagatgagaaaaatccattctgtcaacaaggtgaacactgttcctcaacgatcagatcagatcatgttcccaaagctcaaacgccttgttttcgaagatgtgttgaactgtactgaatggtcgacaggcagctcaaaatcaagaaacaccgtatttccctgcctctgtgaaatccagataaggaactgcccaaagctgagaaactttcctgaccttccacttacactgacaacaatgatcattgagaatgttggtcttgaaacactaccaaggatacaggacagacattcattaccaccatcatcatcatcagatgcgattgcaacatcgaaagaaggcagatggacatcaaggctcacaacactacaaatacatcagtgtcacgggctgaaatctctaggatcaagcctgcttcagcagcagcacctcctaaggtccctcgaggtcttgtcaataaagaactgcgacaacgttacgtgtgatctctctgacggttttcaggacctcactgcattgacagacctatcactatacgattgcccgaagcttctagtcgacaagttccacacatcgctgcgaaagctagagatcagcgaatgcttcatcacacatggggcatgggtggatgactaccccttcctgttctcagtgtggacactaaaggttaccagttgtcctcatgttagcactgatcaggaaagcagcttcagcatcgaacctctggattggttgaactgcctgttcaatgtgtgcagtcttcacctggagaacacattgcttctgaaactgagcatgtttaacaggcttcgctctcttgagatcctagagatcgacgggagtcgctcattcttcgatgatttggtagaggaatttgagtggctggagaagctgcaggctctgagcattagaaactgcaaggaattgagaatgcttccagcgaatatctctactctgcctgtgttggaagaactctgcatagaaaactgtccagctttggaggcgttgcctgcgagtggtctgcctacttcgctgaagagattgtcaatatcgaaatgcagtccacggttaactcaacgatgtcttgatgatgaacctgataatctgaatattgcaaagattgctgttgtttacattgatgggcaatgtattagtattcaacaaaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0573500, RefSeq:Os03g0573500