Os03g0576200

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0576200| Description = Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2| Version = NM_001186578.1 GI:297722286 GeneID:9269115| ...")
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Gene Name

Os03g0576200

Description

Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2

Version

NM_001186578.1 GI:297722286 GeneID:9269115

Length

4331 bp

Definition

Oryza sativa Japonica Group Os03g0576200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21820790..21825120

Sequence Coding Region

21820790..21821044,21821132..21821922,21822024..21822278,21822373..21822487,21822619..21822671
,21822773..21823033,21823359..21823409,21823523..21823774,21824164..21824386
,21824977..21825120

Expression

GEO Profiles:Os03g0576200

Genome Context

<gbrowseImage1> name=NC_008396:21820790..21825120 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21820790..21825120 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccaggagttgagaagaagaagcagcagatggagctcgtcgacgtcgagagcggcggccttcccgtcgagcgtcaggactcgctgttccgggaggcggtgagagctgagcacgccggcgccgctcactgggacgaacaggatagctgggggaggacgatgagtctggcgttccagtgcgtggggatcctgtacggcgacattgggacgtcgtcgttgtacgtctactccagcacttttgagcacggcattgggcaccccgatgacgtcgtcggggtgctctccctcatcgtctacagcttcatgctcttcaccgtcatcaagatcgtcttcgtcgccctgcatgccaacgaccatggtgacggtgggacatttgcactctactcgttaatttcacggcacgcgaaggtgagcctgatccctaaccatcaggcggaagatgagctgatctccgggtatagcagtagcgggaagccatcggcgactctgaggagagctcactggttgaaacagctgctcgaggcgagcaaggcggccaagatttctctcttcctgctcaccatccttgcgatcgccatggtcatcagcgacgctgtgctaacgcctcccatttctgtactgtcagccgtaggtgggttgagagagaaggtacctcatcttacaacagatcaaatagtgtggataacagtggcaattttggtagtcttgtttgcaatccagcgctacgggactgataaagttggctactcttttgcaccaatcattctcttgtggctgctcttgattggagcaactggtctctataacctgatcaagcatgacatcagtgtcttgagggccttcaacccaaaatacatcatcgactatttccgtaggaacaagaaggaaggatgggtctcgcttggaagtattctcctttgcttcacaggatcagaagcactttttgctaatctaggatacttcagcatcagatcaatccagctgagctttagttttgccttacttccatcggtattactcacgtacatcggacaagcagctttcctgagtaagaacccgaagaatgttgccaataccttctttgccgctactccaatttctttgttctggcctacgttcatcatggcgatagctgcatccataataggaagccaagcaatgatatcttgtgcctttgcaactgtttctcatttacaatcacttagttgcttcccaagggtcaagatattgcacacatcaaagcgatttccgggccaattgtacatccctggagtaaacttcttgttatgtgtggctgcttgcgttgtgactgttagcttcaaaacaactgttattataggaaaggcgcacgaaatttgtgtcatccttgtgatgatcatcacaacattactaatgacaatagttatgctcttggtatggaagatcaacatcttgtgggttgctctgttttttatcacattcacatcaacggaggctgtctacctatcgtcagtgctatacaagttcacacatggaccatatgtgcctgtggctatgtcggtagttctaatggtggtgatgatcgtgtggcactacgtgcatgtgaaaagatacaagtatgaattggaacacacagtatccaccgacaaggtgaaagaaatgctggagagccatgatctgaagagggtccgtggcgtagccctgttctacactgaactagtccaaggcatcccgcccatattcccgcacctcatcgagaagatcccaacgattcattctgttcttgtcttcatctctatcaagcatttgccagtaccccatgttgacacctcggagcgattcctcttccgtcaagtagagctaaaggactacaaagtgtttcgatgtgtggcacgatatggatatcgtgattccctcgaggaggccaaggactttgttgttacccttcttgagaaccttcaggattatataagggatgttaatctctacaccgatgagccacacaccattagtgcccatagttcttgcaaccatagcttttctcgggagaagccttctggacggtacgcggtacatgccgaggatatgcttacaccaattgaatccttctctgagatcacagctctatctaactatggaagcgaccgtctaccacacttcaaggcaagtaagatgaatatggaggagttggcgaagattgagcaagagcagatgttcattgagaaggagatggaaaaaggtgttgtatacatacttggagaaaccgaggtggttgtaaggcctcactcatcgcttcttaagaagatagtagtgaactacgtctactctttcttaagaaagaacttcgtgcaagggcagaagatgctatttattccccataggcaattgcttaaagtagggatctcatatgagatttag</cdnaseq>

Protein Sequence

<aaseq>MDPGVEKKKQQMELVDVESGGLPVERQDSLFREAVRAEHAGAAH WDEQDSWGRTMSLAFQCVGILYGDIGTSSLYVYSSTFEHGIGHPDDVVGVLSLIVYSF MLFTVIKIVFVALHANDHGDGGTFALYSLISRHAKVSLIPNHQAEDELISGYSSSGKP SATLRRAHWLKQLLEASKAAKISLFLLTILAIAMVISDAVLTPPISVLSAVGGLREKV PHLTTDQIVWITVAILVVLFAIQRYGTDKVGYSFAPIILLWLLLIGATGLYNLIKHDI SVLRAFNPKYIIDYFRRNKKEGWVSLGSILLCFTGSEALFANLGYFSIRSIQLSFSFA LLPSVLLTYIGQAAFLSKNPKNVANTFFAATPISLFWPTFIMAIAASIIGSQAMISCA FATVSHLQSLSCFPRVKILHTSKRFPGQLYIPGVNFLLCVAACVVTVSFKTTVIIGKA HEICVILVMIITTLLMTIVMLLVWKINILWVALFFITFTSTEAVYLSSVLYKFTHGPY VPVAMSVVLMVVMIVWHYVHVKRYKYELEHTVSTDKVKEMLESHDLKRVRGVALFYTE LVQGIPPIFPHLIEKIPTIHSVLVFISIKHLPVPHVDTSERFLFRQVELKDYKVFRCV ARYGYRDSLEEAKDFVVTLLENLQDYIRDVNLYTDEPHTISAHSSCNHSFSREKPSGR YAVHAEDMLTPIESFSEITALSNYGSDRLPHFKASKMNMEELAKIEQEQMFIEKEMEK GVVYILGETEVVVRPHSSLLKKIVVNYVYSFLRKNFVQGQKMLFIPHRQLLKVGISYE I</aaseq>

Gene Sequence

<dnaseqindica>4077..4331#3199..3989#2843..3097#2634..2748#2450..2502#2088..2348#1712..1762#1347..1598#735..957#1..144#atggatccaggagttgagaagaagaagcagcagatggagctcgtcgacgtcgagagcggcggccttcccgtcgagcgtcaggactcgctgttccgggaggcggtgagagctgagcacgccggcgccgctcactgggacgaacaggtttagttcagttcattaattcaagagaaaatccattatatatatatgccattgagtttcttacatgtctacaatttgcatctgactttatcatgttctacaatatatcatcgacttctgcttaacttcaacgatttaccatcgctgtccggataaccttagttagtactgtatatttttatccaaataaccaaaatacccctggaacaaaaacttccaaaatttgaacagaaattccgaaatatcataaacataagattgtaaatatccaaaatttagccaaaaacttaaaaatgatatttcagaaatttttatcaaattttgaaagtttttgtcccatgggtattttggtcatttggacaaaattgtaagtactaacggaggctaaccgaatagcgatggtaattcgtaaaagttaagcaaaaatcgatggcatattgtgaaaagtgataaagttagtggcaaattgtaaacctgttgtaaacttagtggcatataatcgagcctggcctcgtgattttcttctcgtttttcttcaagcatttgagatttgacgttgtttctctctggcctgcgtgcatgtactgcaggatagctgggggaggacgatgagtctggcgttccagtgcgtggggatcctgtacggcgacattgggacgtcgtcgttgtacgtctactccagcacttttgagcacggcattgggcaccccgatgacgtcgtcggggtgctctccctcatcgtctacagcttcatgctcttcaccgtcatcaagatcgtcttcgtcgccctgcatgccaacgaccatggtgacggttagtgttctcactccgtttcaaattactcgtcgatcgttttattaactttgttataagtagaaatttgtacatcgttcaataatatgtaaattacttcggatattattattaaaatatttcttctgatgaatctaaaaacatactccctccgtcccataaaaaacctaatcctactaatcaatctggacacgtgtatacatgttcataaccaagattggttttttttttgacagagtagtaaatcttatgatattatcttatataaattcatagaaaacgacgaataattttaaacacacacagtatgtagttttgtaccaaattaaatggatcgagcgtttttttttctcaaaatacaagtcaacaaattggtacttcttctccaggtgggacatttgcactctactcgttaatttcacggcacgcgaaggtgagcctgatccctaaccatcaggcggaagatgagctgatctccgggtatagcagtagcgggaagccatcggcgactctgaggagagctcactggttgaaacagctgctcgaggcgagcaaggcggccaagatttctctcttcctgctcaccatccttgcgatcgccatggtcatcagcgacgctgtgctaacgcctcccatttctggtacgtactctggatgagaacgtgtcaggcattgacatattaaacgatcgagttctctgaagttttttttcgtctgggctgattttgtctgtgtttgtaaacctttcgtgcagtactgtcagccgtaggtgggttgagagagaaggtacctcatcttacaacaggtacaggctagaagaataattaatctgcagcataattaataagtacttcatttgtcccaaaaaaaacaaaacctagaaggggatataacccgtctagtacaacgaatctggacacagaggaggggtcatatccccacttaggttaagttttttttttttggactaattgctgggaactttcaactaggatcataactattgagaattaaaccagaattgactatcatactgataaatacatggaggaatataattttccaactattatatagcttgtaactaaagattactgattaattatatgctatttatttttcttgcacagatcaaatagtgtggataacagtggcaattttggtagtcttgtttgcaatccagcgctacgggactgataaagttggctactcttttgcaccaatcattctcttgtggctgctcttgattggagcaactggtctctataacctgatcaagcatgacatcagtgtcttgagggccttcaacccaaaatacatcatcgactatttccgtaggaacaagaaggaaggatgggtctcgcttggaagtattctcctttgcttcacaggtactctattacatctgtttgaaacaaaaccttctgtgatatttaatgcgcttatagggaagattatcttacaataaaaatgtactatcctcatgttataggatcagaagcactttttgctaatctaggatacttcagcatcagatcaatccaggtgtgtgtgcactgaatcaataatcagtatagtacgatttatctactagaatgatctcttttgggaggttgatatacttgataatacccaagatcataacatcgaaataagttattttctaattttttcagctgagctttagttttgccttacttccatcggtattactcacgtacatcggacaagcagctttcctgagtaagaacccgaagaatgttgccaataccttctttgccgctactccaagtaagcatttcatctttattatatcaccttcaaggcttcagtacgagtcacttcttacaaataaacaaaataattatttaatttttaaatgcagtttctttgttctggcctacgttcatcatggcgatagctgcatccataataggaagccaagcaatgatatcttgtgcctttgcaactgtttctcatttacaatcacttagttgcttcccaagggtcaagatattgcacacatcaaagcgatttccgggccaattgtacatccctggagtaaacttcttgttatgtgtggctgcttgcgttgtgactgttagcttcaaaacaactgttattataggaaaggcgcacggtaataatttatttcatttatatatatttgacaaaagaattaagcttcggattatatggtttcacctaattgtgcccatcttccttgatcaatgcatacagaaatttgtgtcatccttgtgatgatcatcacaacattactaatgacaatagttatgctcttggtatggaagatcaacatcttgtgggttgctctgttttttatcacattcacatcaacggaggctgtctacctatcgtcagtgctatacaagttcacacatggaccatatgtgcctgtggctatgtcggtagttctaatggtggtgatgatcgtgtggcactacgtgcatgtgaaaagatacaagtatgaattggaacacacagtatccaccgacaaggtgaaagaaatgctggagagccatgatctgaagagggtccgtggcgtagccctgttctacactgaactagtccaaggcatcccgcccatattcccgcacctcatcgagaagatcccaacgattcattctgttcttgtcttcatctctatcaagcatttgccagtaccccatgttgacacctcggagcgattcctcttccgtcaagtagagctaaaggactacaaagtgtttcgatgtgtggcacgatatggatatcgtgattccctcgaggaggccaaggactttgttgttacccttcttgagaaccttcaggattatataagggatgttaatctctacaccgatgagccacacaccattagtgcccatagttcttgcaaccatagcttttctcgggagaagccttctggacggtacgcggtacatgccgaggatatgcttacaccaattgaatccttctctgagatcacagctctatctaactatggaagcgaccgtctaccacacttcaaggtaataaattattgcttgaacttaatatttctaaattgtgtaaatattatggttgcattagttactaataaatggtatttgtactaggcaagtaagatgaatatggaggagttggcgaagattgagcaagagcagatgttcattgagaaggagatggaaaaaggtgttgtatacatacttggagaaaccgaggtggttgtaaggcctcactcatcgcttcttaagaagatagtagtgaactacgtctactctttcttaagaaagaacttcgtgcaagggcagaagatgctatttattccccataggcaattgcttaaagtagggatctcatatgagatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0576200, RefSeq:Os03g0576200