Os03g0576400

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0576400| Description = Similar to 26S proteasome subunit RPN6a (Fragment)| Version = NM_001057069.2 GI:297601212 GeneID:4333303| Length = 2...")
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Gene Name

Os03g0576400

Description

Similar to 26S proteasome subunit RPN6a (Fragment)

Version

NM_001057069.2 GI:297601212 GeneID:4333303

Length

2364 bp

Definition

Oryza sativa Japonica Group Os03g0576400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21838475..21840838

Sequence Coding Region

21839729..21840661

Expression

GEO Profiles:Os03g0576400

Genome Context

<gbrowseImage1> name=NC_008396:21838475..21840838 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21838475..21840838 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgaatggacccgtgctgagaagcggacattccttaggcagcgtgtggaggcaaggctagcagcccttctgttagagaatcaggagtacactgatgctcttactctccttactgatcttatcaaggaagtcaggaggcttgatgacaagttgcttcttgtggacattgatcttctggagagtaaactccacttttctctgagaaacctgccaaaggccaaagcttcattgactgctgctagaacagcagcgaatgccatttatgttccaccagcacaacagggtactattgatatacagagtggaatccttcatgctgaagaaaaggactacaagactgcttacagctactttttcgaagcatttgaagcattcagtgccctggaggacccaaaggccatcttcagcttgaagtacatgctcctgtgcaagataatggttaaccaagctgatgatgtcgcaggaataatctcatctaaggctggtttgaagtatctgggtcctgatgttgatgctatgaaagctgtagctgatgcctactcaaaaagatctctcaagtactttgaaactgcccttcgtgattacaagtctcagctggaggaggaccctattgtgcacaggcatctttcatctctgtatgatgccctcctggagcagaacctgtgcaggctgattgagccgtacgcaagggtggagattgcacatatcgcggagatgattgagttgccagttgatcatgttgagaagaagctgtcgcagatgatccttgacaagaagtttgcaggaactctcgatcaaggtgctggctgcctcattatctttgaggatcccaagaccgaggcaatcttccctgctacacttgaaactatttcgaatgttgggaaggtcgttgacagtctttacatgaggtctgccaagatcatggcttaa</cdnaseq>

Protein Sequence

<aaseq>MVEWTRAEKRTFLRQRVEARLAALLLENQEYTDALTLLTDLIKE VRRLDDKLLLVDIDLLESKLHFSLRNLPKAKASLTAARTAANAIYVPPAQQGTIDIQS GILHAEEKDYKTAYSYFFEAFEAFSALEDPKAIFSLKYMLLCKIMVNQADDVAGIISS KAGLKYLGPDVDAMKAVADAYSKRSLKYFETALRDYKSQLEEDPIVHRHLSSLYDALL EQNLCRLIEPYARVEIAHIAEMIELPVDHVEKKLSQMILDKKFAGTLDQGAGCLIIFE DPKTEAIFPATLETISNVGKVVDSLYMRSAKIMA</aaseq>

Gene Sequence

<dnaseqindica>1255..2187#gtcccacctcctccgacttcgcctcgtccactccaccacgccgccgaaagccgcaactctccaccgccggctcggcgtcggcgtccgagaccgagtagtaatccacagatctcctcctcctgttcttctcctccaagaaagaaatcttgaaagccccccaacaccagccgacccctaactcgatctcgtctccgtatatacactgatctccctcccgccgcgagtgtagcagcagctccgccgccgcggtgagcaccccgcacggcacatcctctggcgcccttttcccacgcaattttggggttgagttgagttactagagattttggttgcgacctagggtccgggagttagtttgcgatgcatctatatgaacaagggtaattgtatatttgtcctcttttttgtgtgtgaattgatactcttgaagattgtgcctttggtgcatcttagatgcagcagctggtttaaccattaactgataaaataccccctgatgaattcttttgtctattcagggacagaatatcttgataacctagaatttccttggatttgccttgcccccataattgggatttgggaacaagtcttggcatgcccgtgagcagaatattttgcaacacttaagcaaagagtgttatacaagtcccagtcttaacatgtagctgtagaggatagaaattgttcagaggaagttgtttgattatataatctgttgttatagttctctgagtattggttgtgcaatgtgacagatcacagatgtaatgagaaccaccaaactgaaaaataattttcctgatttactatgtgtactttggattgttttcacgtttgttctggctatttctgatttgttttgtaactctcattgtaacatttctttcattttactgacagagcgatcatgtcttctatggaatcatcttgccttcctgcaaccactgagtcaatagcgaaggctcaggaagctaaagacgcttcggagtccatttcaatcctttaccgtgttctacaagacccgtcatcttctgcagaggctctgagaaccaaggaacttgcaattacaaatcttaccaactacctcactaaagagaaccgggctgaggagctgcgaaaccttctaacccagctcaggccttttttctcgttgattcccaaggcaaagactgcaaaattgtccgtggaatcatcgatgctgttgccaagataataggaacatctgaacttcagatctcactctgcaaggagatggttgaatggacccgtgctgagaagcggacattccttaggcagcgtgtggaggcaaggctagcagcccttctgttagagaatcaggagtacactgatgctcttactctccttactgatcttatcaaggaagtcaggaggcttgatgacaagttgcttcttgtggacattgatcttctggagagtaaactccacttttctctgagaaacctgccaaaggccaaagcttcattgactgctgctagaacagcagcgaatgccatttatgttccaccagcacaacagggtactattgatatacagagtggaatccttcatgctgaagaaaaggactacaagactgcttacagctactttttcgaagcatttgaagcattcagtgccctggaggacccaaaggccatcttcagcttgaagtacatgctcctgtgcaagataatggttaaccaagctgatgatgtcgcaggaataatctcatctaaggctggtttgaagtatctgggtcctgatgttgatgctatgaaagctgtagctgatgcctactcaaaaagatctctcaagtactttgaaactgcccttcgtgattacaagtctcagctggaggaggaccctattgtgcacaggcatctttcatctctgtatgatgccctcctggagcagaacctgtgcaggctgattgagccgtacgcaagggtggagattgcacatatcgcggagatgattgagttgccagttgatcatgttgagaagaagctgtcgcagatgatccttgacaagaagtttgcaggaactctcgatcaaggtgctggctgcctcattatctttgaggatcccaagaccgaggcaatcttccctgctacacttgaaactatttcgaatgttgggaaggtcgttgacagtctttacatgaggtctgccaagatcatggcttaatgtctttacagtcatttgcgtttacttgttatctctaatttcatcttgcttcagttactgttggtcttcatagacatttaatcctgcatattgacatttttattctgcatgttgatctctcctagttaaagaaaaggtaccctcttgaatgccaacaaatacaatttggtgtttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0576400, RefSeq:Os03g0576400