Os03g0578900

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0578900| Description = Similar to Gibberellin MYB transcription factor| Version = NM_001057081.2 GI:297601219 GeneID:4333315| Length = 2684...")
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Gene Name

Os03g0578900

Description

Similar to Gibberellin MYB transcription factor

Version

NM_001057081.2 GI:297601219 GeneID:4333315

Length

2684 bp

Definition

Oryza sativa Japonica Group Os03g0578900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21973010..21975693

Sequence Coding Region

21973010..21973411,21973523..21974282,21975389..21975693

Expression

GEO Profiles:Os03g0578900

Genome Context

<gbrowseImage1> name=NC_008396:21973010..21975693 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21973010..21975693 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaagccggcaccggcaccggcgtcgtcggaggaggagaaggaggtggtggctactgctgctactggagaaaggaggcatgaggaggcgacggccgggagagaggagcaggaagaggaggaggaggaggaggaggcgccggtggtgctgaagaaggggccgtggaccacggcggaggacgccgtgctggtgcagcacgtccggcagcacggcgaggggaactggaacgcggtgcagcggatgaccgggctgctccgctgcggcaagagctgccgcctccggtggaccaaccacctccgccccaacctcaagaagggttccttctcccccgacgaggagctcctcatcgcgcagctccacgcccagctcggcaacaagtgggcgcgcatggcctcccatctgccggggaggacggacaacgagatcaagaactactggaacacgaggaccaagcggcgccagcgcgccggcctgccggtgtacccgccggatgtgcagctccacctcgccttcgccaagcgctgccgctacgacgacttctcctcgccgctgtcgtcgccgcagcaatccgcggggagcaatgtcctctctatggacgcagccgatgccgccggcgccgcctcgtccgggtacaccagcgcgcgcccgccgccgctcgacctcgccggccagcttgccatggggagccggccggttcagctcctcgccgcgacgccgttctccgcgccttcgtccccgtggggtaagccgttcgctcggaacgcgcagttcttccagttcccgcactcgtcgcccgtgtcgccgacgacgccgaccgggccggtgcaggtgcacccggtcacgccggagctctcgttgggctacggccttcacgccggcgaccgggccagactcccgcctgtctcgccgtccccgggtgccagagccgagctcccttcaagccaattgcgcccgtcgatggcgcctaccacagccgccgccgccgccaccggcggcttggtcggcggagcgctgcaggatcacccaaacgcggcgagcctcgaggccatgctgcaggagctgcacgacgccatcaagatcgaaccgccggcgccgccggaaaacagaggaacggaagaagaaggcggcggcggcggcggcaatctgcgcggcgtaagtggtgacggcaaaccggaggtagagctcaaggacgacatcgagacactcttcgaccttatcataccggcgacgttcccggcggcggcgccggagcccgccgccgccgcgacggccgcctccgccgcgcccaaccactccagctccgtctcgcagcacagcagcgacgaccaggaccactccaacggcgccgacgtcctcgacctgcccatcctcaccggcggcggaggcggctcgtcggagcaggacgactggagcctcgacggcgccgcctgccagtgggacaacatctccggcggcatctgctga</cdnaseq>

Protein Sequence

<aaseq>MIKPAPAPASSEEEKEVVATAATGERRHEEATAGREEQEEEEEE EEAPVVLKKGPWTTAEDAVLVQHVRQHGEGNWNAVQRMTGLLRCGKSCRLRWTNHLRP NLKKGSFSPDEELLIAQLHAQLGNKWARMASHLPGRTDNEIKNYWNTRTKRRQRAGLP VYPPDVQLHLAFAKRCRYDDFSSPLSSPQQSAGSNVLSMDAADAAGAASSGYTSARPP PLDLAGQLAMGSRPVQLLAATPFSAPSSPWGKPFARNAQFFQFPHSSPVSPTTPTGPV QVHPVTPELSLGYGLHAGDRARLPPVSPSPGARAELPSSQLRPSMAPTTAAAAATGGL VGGALQDHPNAASLEAMLQELHDAIKIEPPAPPENRGTEEEGGGGGGNLRGVSGDGKP EVELKDDIETLFDLIIPATFPAAAPEPAAAATAASAAPNHSSSVSQHSSDDQDHSNGA DVLDLPILTGGGGGSSEQDDWSLDGAACQWDNISGGIC</aaseq>

Gene Sequence

<dnaseqindica>1..402#514..1273#2380..2684#atgatcaagccggcaccggcaccggcgtcgtcggaggaggagaaggaggtggtggctactgctgctactggagaaaggaggcatgaggaggcgacggccgggagagaggagcaggaagaggaggaggaggaggaggaggcgccggtggtgctgaagaaggggccgtggaccacggcggaggacgccgtgctggtgcagcacgtccggcagcacggcgaggggaactggaacgcggtgcagcggatgaccgggctgctccgctgcggcaagagctgccgcctccggtggaccaaccacctccgccccaacctcaagaagggttccttctcccccgacgaggagctcctcatcgcgcagctccacgcccagctcggcaacaagtgggcgcgcatggcctcccatgtaagtaaagccccaaatctccggttgatcgatcgatcgagctgtctgttgttttccatctcaaagttgttgatgtgatgtgatgcgttgtgttctttgttttgtccccagctgccggggaggacggacaacgagatcaagaactactggaacacgaggaccaagcggcgccagcgcgccggcctgccggtgtacccgccggatgtgcagctccacctcgccttcgccaagcgctgccgctacgacgacttctcctcgccgctgtcgtcgccgcagcaatccgcggggagcaatgtcctctctatggacgcagccgatgccgccggcgccgcctcgtccgggtacaccagcgcgcgcccgccgccgctcgacctcgccggccagcttgccatggggagccggccggttcagctcctcgccgcgacgccgttctccgcgccttcgtccccgtggggtaagccgttcgctcggaacgcgcagttcttccagttcccgcactcgtcgcccgtgtcgccgacgacgccgaccgggccggtgcaggtgcacccggtcacgccggagctctcgttgggctacggccttcacgccggcgaccgggccagactcccgcctgtctcgccgtccccgggtgccagagccgagctcccttcaagccaattgcgcccgtcgatggcgcctaccacagccgccgccgccgccaccggcggcttggtcggcggagcgctgcaggatcacccaaacgcggcgagcctcgaggccatgctgcaggagctgcacgacgccatcaagatcgaaccgccggcgccgccggaaaacagaggaacggaagaagaaggcggcggcggcggcggcaatctgcgcggcgtaagtggtgagtagtgcatgtcgcgcgtgaagcattttcctcacattttccactcattggatgcatctcaagttctctctctctctctctctctctctctctctctctctctctctctctctttttaagtgtgttgctttattgtagaagagaacaaattggcatgattatgatgtgaacacatacatagatcagaggatgaacctttttgtttgtgcttccaaaatctccatttgttttcttgctgaattctacctacttcctgaaaagcaaattaaacaacaccaatttcatttacctcgactcacagatcactctagagttaacctgcttagtgagaaaccaagaatgggaaaaaaatatatttcttaccagcaaaaacaatagtacatattagttttaggagttagcaaaatcagaaacaggacagctctgcttggaaccttcttttgcttttctttttgatagttttaaggtaattagcactgcatctgcatgtactgatgtacagaggcttcagaggatttctttttgtccttgcaagacagtgacagcctacagtgactgcctttgatcttgttccatgattacttttccttatcttaccaagtagtactttaatgcctttatttccctttcgactttttttttctctctttctcactctgcatctgccgctttcctatactactacctaatctaatctgcagccaattcatgcttcctttttgttcttccatgattgccttgctcatcacctccaataacagtacgtcacattggtgtcatatgattcataggttaattgattatcataatcaagcaaatataaataggatcatatctaggataagagtactttttgggagattatctataggcacctatccaactagtgctgagcagaatcgatcaaaaattaattctgcgtaagttaatgaatcaactagttgagttggtaccaagaatcgaaatcgtgcaaaacaaaaaaactttcttgaaataatttcagttccttcatgagcaaatttttgacaaattgatgcccatcaagtctgaagatttttgcatcgtggggttgcattctgtactaatttcacttcaatttccaggtgacggcaaaccggaggtagagctcaaggacgacatcgagacactcttcgaccttatcataccggcgacgttcccggcggcggcgccggagcccgccgccgccgcgacggccgcctccgccgcgcccaaccactccagctccgtctcgcagcacagcagcgacgaccaggaccactccaacggcgccgacgtcctcgacctgcccatcctcaccggcggcggaggcggctcgtcggagcaggacgactggagcctcgacggcgccgcctgccagtgggacaacatctccggcggcatctgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0578900, RefSeq:Os03g0578900