Os03g0584300

From RiceWiki
Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0584300| Description = Protein of unknown function UPF0136, Transmembrane family protein| Version = NM_001057100.1 GI:115453928 GeneID:43333...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0584300

Description

Protein of unknown function UPF0136, Transmembrane family protein

Version

NM_001057100.1 GI:115453928 GeneID:4333338

Length

2564 bp

Definition

Oryza sativa Japonica Group Os03g0584300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22302134..22304697

Sequence Coding Region

22302231..22302435,22303912..22303999,22304446..22304524

Expression

GEO Profiles:Os03g0584300

Genome Context

<gbrowseImage1> name=NC_008396:22302134..22304697 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22302134..22304697 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatttctacgtcaccatcccgtatggcgccgcggtcctcgtcgggggcgtcgccggctacctcaagcgcgggagcaaggcatcgctggccgcgggcggcgggttcggcggcgcgctcctcctcgccggcgcgctgagcgccagggccttcgcgcgcggccaccccagcggctccctcttcgccgccgtcctccagactgtttgtgctgtagcattaactgtcgttatgggaataagatacatcaaaacaagaaaggtaatgccagctggaataattgctgccgtcagtgcacttgtactgatattctacatctacaagatatcaaatggtggcaataaggtttatgtcccagtgagcgcggagtga</cdnaseq>

Protein Sequence

<aaseq>MEDFYVTIPYGAAVLVGGVAGYLKRGSKASLAAGGGFGGALLLA GALSARAFARGHPSGSLFAAVLQTVCAVALTVVMGIRYIKTRKVMPAGIIAAVSALVL IFYIYKISNGGNKVYVPVSAE</aaseq>

Gene Sequence

<dnaseqindica>98..302#1779..1866#2313..2391#acagtcccacaccgccggagaagaagactagcgacgcgaggcgaggctctcggaggagtactatcaccacccaccgccggcggggaggaagcagatcatggaggatttctacgtcaccatcccgtatggcgccgcggtcctcgtcgggggcgtcgccggctacctcaagcgcgggagcaaggcatcgctggccgcgggcggcgggttcggcggcgcgctcctcctcgccggcgcgctgagcgccagggccttcgcgcgcggccaccccagcggctccctcttcgccgccgtcctccagactggtccgtttctgctagttttgctacagtgctactcccccccatcctccatccatcccctccgttttattgttttgctcatttcgacatggatttagtaccgattatgtatgccatgctcgtaaatttcttgcgtttttagtgaatctaacaagaatctggacctttaggggaattgatgctgttgactgacactggaattgaactgcgagaacctgcacaattacatacctggtggttgtttaacctttattgtatttaaagaaacctgctattgctgggaatggatgcatcttacatttatgtttgaattttagcaagatttaggatgtagattgatgaaaatgtttgaaatgtaggttcctttttttgaggaaacaaattcagcatgcccaaattcgcattatttttcagtttagaatataataagttaacaagaaacaattgcagttccaaagggtgaacctccacgcagttttctattcttttattatgttgttcactgaataaaagttctcccacaagctcttttcgcaattatcaggagcaattgatttatttacaataaagaaaatgacttcttggaagctttggcatagtattttagaaaagtaatttcttttagaatgtaggggttggctagctctttgttgaattctgataaagaggttcaaagtacagcatgaccataaacttgggttacagataaacatgcagcatttttttttctttgcaagggaaacatacagtgttttggaaatgaacaatcctgatcttcacaccaacaatactaagtcccttgtcatgacccgaggccatgacgggataaacaccaccgggaatatagccgggcggcgtcggctcctggagaatggatgtagatttaggctagggagaagaacattgttgagagggagagattagactaattgatattcattgcttgcctgataatagacacaatgtacaacttgacccctaagtaagaacctaatcttatattatctctaactaactaataatcttcttatcttatctctaactaactaataatcttatctcttaacttaattggtatgcgctacctataggccttggcctacggcccaatgcccatgacatccatgctaagagaaataaaatgaatcttgtggtggattgtgtattgcttcaaaacagcacagcagcataggataatgcctttcagaaagtcctcgcaaatttcaacaaacctgaacatataacattattttgttttggcatgtcatgttgtcttcctcctgaaaatcagtacaactccagggctatctgtaccagttccgctagcaaatgcaactaattgtatatatcaacatggacttcatatgataatttatgcacatatcctaatctgatgttttggaccatcttcgatgaagtggaattcttgtttgttttttcttgttaagaatttatcttataagctttatttttgaacagtttgtgctgtagcattaactgtcgttatgggaataagatacatcaaaacaagaaaggtaatgccagctggaataattgctgccgtcaggtattctctctctctctctctgtctctctcatgttattgtgtcccttttgtcaggttctaaatttgctatgctttaataaaatccttctgtagttctgtactgatatttcattgtgcctttcatagcctatattaaccatagccattgtcagcaaagtgtagttatatgtgctatatgttaaacaatattactaactagccctttggctttgattctcagaagtattttttcctttgtgcatggagcccacaaccactacacatatttgagaatacttcacctagtcaagtctttctttccttctttcatatactagataatagatactactccatgatatcttattcccatccttggtgccttggttgttgccttgctgttctgtgcactctaatttaaatatatatagatgacgccttaacatggtctatacatgtctttgcagtgcacttgtactgatattctacatctacaagatatcaaatggtggcaataaggtttatgtcccagtgagcgcggagtgatactggaggccagggtattatggtgcattctctggataattctgaatcgatcgatctgttcttctaatttgttgcatacctgtattctgccatcccagtgatgagaacatcgttctgcataatgtgaattatgaatgacccatgaaaaatctcggcagttcagacactggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0584300, RefSeq:Os03g0584300