Os03g0586600

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0586600| Description = Similar to DNA-DIRECTED RNA POLYMERASES I, II, AND III 15 KD POLYPEPTIDE(RPABC6)| Version = NM_001057105.1 GI:1154539...")
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Gene Name

Os03g0586600

Description

Similar to DNA-DIRECTED RNA POLYMERASES I, II, AND III 15 KD POLYPEPTIDE(RPABC6)

Version

NM_001057105.1 GI:115453938 GeneID:4333343

Length

3904 bp

Definition

Oryza sativa Japonica Group Os03g0586600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22397472..22401375

Sequence Coding Region

22397930..22397999,22398081..22398148,22399509..22399560,22399654..22399823,22399901..22399934
,22401240..22401274

Expression

GEO Profiles:Os03g0586600

Genome Context

<gbrowseImage1> name=NC_008396:22397472..22401375 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22397472..22401375 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgacgactacaacgacatggacatggggtatgaggatgagccaccagaacctgagattgaggaaggggctgaagaggaacctgagaataacgaggatggccctgatgaggttgtaggggcagaggctgaagataaggaacaagaaaaaactcagcgcccacgcaaaacgtcaaagtatatgacaaagtatgagcgtgcccgcatcctgggtacacgtgcattacagataagcatgaatgctccagttatggttgagcttgagggagaaactgatcctcttgagattgccatgaaagagctgagagcacgcaagatcccattcacaattaggcggtacttacctgacggaagctatgaggactggggcgttgacgagcttattgtggaggactcctggaaacgccaggttggaggcggctaa</cdnaseq>

Protein Sequence

<aaseq>MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGPDEVVGAE AEDKEQEKTQRPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE LRARKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGG</aaseq>

Gene Sequence

<dnaseqindica>3377..3446#3228..3295#1816..1867#1553..1722#1442..1475#102..136#agagtcccatttgccccctttctccctgtcgagcaccgcttggccgccgtgcggcgaaaccctagcgattgtagcggccggaatcagaggcggcggaagccatggcggacgacgactacaacgacatggacatggggtttgccttactctctactatctcactctctctagtcctttttccgtatgatcatgggaatccaatctagggtttcgataggcatcgcctgttctaataaatttctaatcccagaccggtcgaaccagctctctgtgtaacatgttgcgccggtaggagtctgtgctgggtgattcgttggcgctcctcatcgccatggggagcatttggggtggtgggttcgttgattcgagtcgaagctagttatggcgattgccgcgattcactcgattggtttttggaaaacgagaggtgttaatgttggatgcgtactggtcttcacgggtaaaaggtgtctttggagtttattcttggggcatgttttgatcgttgagtcgagtattattcttagggcatgtttcgttcgttgagtcgagtaatggctcttagaagttgtctgagattagtttgtcagcaacagaaggggatactgtaaagagtgatattctgtttccctgcttgtttggttatggttaggtttagcaggttctttgaaatttaggtttgcttggatgaatcaattgggttaatgcgacaatcccgctcaccaattatgggaattttcattgatgattctataccgctttgtttgagagaaaagaacattgaacgcagtcggggatggggggttctcatgcgtacctcctgcttgctcctttctatggtgacatggacatgaagggattggctagaccgatataggtcaggggagctatgcaattgatgtaataggaggcttggtgcaaatcatttatgcagcagtataaagaaaggggaaaaatatatatgcatataaggaaaacaaggagaaaaatgaaagataaaaatggaaaaaatctattacatattaagatagatggtcattgtactaatatggaatcctaactttgtcacgctagctaaaaacttagaggatctctaacatcttgcttctaattggaacaagaatgtgtggtttcattcttttctgcttaatttactgtggtggcttggcggttaaaacatatgaattagttagttatatgtccattttctcaggaatattcaattttagtgtaattactaaattacacagaccaaagttatgttcattagtgttggtagaagtgaaaattttgaatttcttttacatttcatcctagtgagatatctaccattatccttgcacaactatatgattgctgaagcactgattgttatatgtcattttaaaggattgttttgttggatattgattttggaatggcattgtattttcctctgcaggtatgaggatgagccaccagaacctgagattgaggtacacacattgctatcctcatgcagtgatgttatctgttaatggaaaagaactgatggagttctgttcaataataggaaggggctgaagaggaacctgagaataacgaggatggccctgatgaggttgtaggggcagaggctgaagataaggaacaagaaaaaactcagcgcccacgcaaaacgtcaaagtatatgacaaagtatgagcgtgcccgcatcctgggtacacgtgcattacagataaggtatgtttctatatatcatattgcacagtattgccaatttgatggctaatagtttaccatacagtattaataacccttgctgttgttttatagcatgaatgctccagttatggttgagcttgagggagaaactgatcctcttgaggtaaattctatttttccaaactatacatgcaataggtatttgttcaaacaagcgataacctctacatattcattattttgatttttgccagttccatataccaagcttatattgtacaacttaaataaccttttacaataaacatctgtttccatcatgaagaatgaaaatgaacaatggaattttcttgtttaggcatacaacacctgactgccaactaattaataaaattaacgtttgaatatataattcaacaaagtacacatgtttgatagctgtatgtaattgtgtatagacataggccagcaattcaatcaatagaatgtctttttttcgtcatggagggctgccacgccgagtcagcttgaaatctaaatatgtgactgacaataagttttcgtctgcaattatactagtatgcacaaggttgtatttgtacacatatttctttcatcaaggctctagatactattatttggtagccttgtgattctgtgatttgtttccacaatataaaaacagataggacaaatgttgacaagcaccctgacttgtctatttgaattagttcttctacccagacagaagttattagtcagggctcttatacattgtttttcatggcatttcaaatatcatgaaattgatctagtttatgtggagaacaagtggcaattgattaattctgtattatgttttagtgtttgatagtccaataccaaagattggttttgttgtaacacttgatatattatatggctgctggctggtaaatatgccactgctatccctgaagtgggactttcatacgcattagttccatccttattccaacttctagaaggtttattatatctaaatcggaagagttaaccggaggttttaaaaattctaggaaaaggaaaaggcaggtgccgggttttctttgttcatgccaaactttgttatcatgatggacagagaaaaggaagagatagaagaaatcaattcttccggaatatgaatacaatttttgttgactcccatattgttctcaatcttaaaattttgtatgtttacacgtgtccctcttcctccatgtcatgaaaaattttcacatgtttttagaattccacaagggtcttagattgcttttcccggataaaaaattattttggtatgttttaggcatggtaactgaaatattttggtagagtactcccacaaaaccaagatgagatgaatgttgactgcacttatcaacaactcattataaatactacttagatttcttctctctttctgtcagaaattgtcagttgattttattctatctttcaaattacttgctatgctaaactattgtctttgtgcaaattagattgccatgaaagagctgagagcacgcaagatcccattcacaattaggcggtacttacctgacggaaggtgagatttgaataaaagacatttatgtgtttcctgattttgtaacctcattataatagtttactgtgtgttcaaatatagctatgaggactggggcgttgacgagcttattgtggaggactcctggaaacgccaggttggaggcggctaagctgtgactgaggctactcaaaacgaacagcaatgtgctgcaagttgactttgcccttgtagtaatatggtctgtgcaactccattatgactggatgctgtatcagtgaactggcgtgatgatggcatgccatgttgccttgacatgtatgccttctttccgcagtgtaactgtgactgaaatttgcatggttgcatcagtttgcttggaccatttgcagactttgtcctgtgaatgttcaaggcttaatgcttggttttttttttcttggcctaatttggtagtcgtctagcagacatgagcgacatttttgcagtacgtagacatcagacaaacgggcggatgcctggaattgtgctggaactgaacttaaattccggttgattcgtgttctgggtccatttccacttttccagtataagtatcaaactctgaactgaaggctatatagataaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0586600, RefSeq:Os03g0586600