Os03g0587000

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0587000| Description = Similar to L-galactose-1-phosphate phosphatase| Version = NM_001057109.1 GI:115453946 GeneID:4333347| Length = 3019 ...")
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Gene Name

Os03g0587000

Description

Similar to L-galactose-1-phosphate phosphatase

Version

NM_001057109.1 GI:115453946 GeneID:4333347

Length

3019 bp

Definition

Oryza sativa Japonica Group Os03g0587000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22442141..22445159

Sequence Coding Region

22442211..22442267,22442382..22442432,22442562..22442749,22442836..22442920,22443097..22443151
,22443247..22443290,22444294..22444362,22444456..22444556,22444645..22444701
,22444789..22444885

Expression

GEO Profiles:Os03g0587000

Genome Context

<gbrowseImage1> name=NC_008396:22442141..22445159 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22442141..22445159 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggagcagttcctcgccgtcgcggtggacgccgccaagaacgccggcgagatcatccgcaagggcttctaccagaccaagaacgtggagcacaagggccaggtggatttggtgacggagacggacaaggcctgcgaggacctcatcttcaaccacctccggaagcactacccggaccacaagttcatcggcgaggagacgtccgcggcgctcggcgccaccgcggacctcaccgacgacccgacctggatcgtcgaccccctcgatggcaccaccaatttcgtccatggcttcccttttgtttgcgtctcgatcggtctcaccgtcgggaaaattcctactgttggagttgtgtacaaccccatcatgaatgagcttttcacagctgttcgtggaaaaggtgccttcctcaatggttctccaatcaaaacttcatctcaaaacgagctggtgaaggctcttctggtaacagaggttggaaccaaaagagataaggccactctggatgatacaacaaacagaatcaacaagttactattcaagattagatctatacggatgtgtggctcgttggccttgaacatgtgtggagttgcctgtggtaggcttgatttgtgttatgagattggatttggtggcccctgggatgtggccgctggagctctgattcttcgggaagctggtggttttgtttttgatccgagtggtggggagtttgatctgatggcacgaagaatggcaggatcaaacagctatctgaaggatcaattcatcaaagaattgggagatacaagttga</cdnaseq>

Protein Sequence

<aaseq>MAEEQFLAVAVDAAKNAGEIIRKGFYQTKNVEHKGQVDLVTETD KACEDLIFNHLRKHYPDHKFIGEETSAALGATADLTDDPTWIVDPLDGTTNFVHGFPF VCVSIGLTVGKIPTVGVVYNPIMNELFTAVRGKGAFLNGSPIKTSSQNELVKALLVTE VGTKRDKATLDDTTNRINKLLFKIRSIRMCGSLALNMCGVACGRLDLCYEIGFGGPWD VAAGALILREAGGFVFDPSGGEFDLMARRMAGSNSYLKDQFIKELGDTS</aaseq>

Gene Sequence

<dnaseqindica>71..127#242..292#422..609#696..780#957..1011#1107..1150#2154..2222#2316..2416#2505..2561#2649..2745#gttggcgaaggaccaaccaatttcctctctctaatcgccgcggcgggggatagattgggagtgagcgcgtatggcggaggagcagttcctcgccgtcgcggtggacgccgccaagaacgccggcgaggtatgccctctcctgaaccactcgattcctcccttgccccctcctccctgtgcacgattcctcgtgtttttctttttccttgtccgttcttgatttcctggtgcttctccgcagatcatccgcaagggcttctaccagaccaagaacgtggagcacaagggccaggtctctcttccttcttccacggttccaccgatctcatcgcattccttttccccatagctgatggagtttggtttgccctggattggaatttggggtttcttggtgaccgtggctgcattgcaactgcaggtggatttggtgacggagacggacaaggcctgcgaggacctcatcttcaaccacctccggaagcactacccggaccacaagttcatcggcgaggagacgtccgcggcgctcggcgccaccgcggacctcaccgacgacccgacctggatcgtcgaccccctcgatggcaccaccaatttcgtccatgggtaattattagcttctgtttctatccccattataccaccttctttcttttttttaatgaacattgggtatgtcaatcacattgcagcttcccttttgtttgcgtctcgatcggtctcaccgtcgggaaaattcctactgttggagttgtgtacaaccccatcatgaatgaggtaaaagtgacatgtgaagcatttacatcgcaattggattgaaggacataggctatttccttctatgtaccaatatgtaaaaatcacagcttatttgtctctataggatttatattcttattgttcatatgccgacttagttttgtagtctaatttcatgttaccttttcatttagcttttcacagctgttcgtggaaaaggtgccttcctcaatggttctccaatcaaaagtaagtgctatattttggttaattgggtcctgatgtgttgacattcaatagaagcaacatattgaacttagacagtttccttctctgctgagcagcttcatctcaaaacgagctggtgaaggctcttctggtaacagaggtaagtgataccatcaagagtcaattttattacatgtaaagaaatttaatttgtattgatgatgcatatgcgtagaaaaatcaataggatttcatctcaaccatgttgttctaaattattttgttgcttcatttcactaatcagtataagccgtcttctgaatagcttaagatttggccgctactgtctttcctagaaaacatcatcgaacaatgtttgatcgtgttaacgtgcactttgcttgttgaatggtgatatttcacaactacttttctagcagatgtatagcttatgctttactgatgcaaatactgacagcatgtacatgaccatgcatacactcttttgaactagcatggagatttcatctagatatttggaacccccacacctgcatacagacccgaaagaaattcttgaaaatattattattttctgaactttaaagagtttggacacaatctaaccaaaagttaactccatgtgactcaatgtttttgggatttgtgatccattccaacttgatttaattcaatattccacactcaagtaattatgttggttgagatgaccataaccttatcgattaaatactaatctaatcatgtcaactggattttgtggaataccacattatctcttaaaacaatagttgaaatatttatggtaacatattaattgattcttaaacattggctaagttgcccatttcgggcttcctgttggagtgtgatattcttttttttcctggggctgtccaattcatattgatatatcaatatgaatgtataacacatgctacactggatgcaattagtttcttgtgagcctctttcgtacttgatcaatcatcagtgacaaacttcattgattctgaaacttgatttacttacaatggaaatgagagttctagtttctatttcttgaatcattttcatataaaagttttacatcataatattagtgaaaatatttgatcaataaccttgtgccaattgagcaggttggaaccaaaagagataaggccactctggatgatacaacaaacagaatcaacaagttactattcaaggtaagccttataagttatacaccaatattttcatgacatacaattatagttcaacagatcggtgcactaaaatggtatatttcattatttcagattagatctatacggatgtgtggctcgttggccttgaacatgtgtggagttgcctgtggtaggcttgatttgtgttatgagattggatttggtggcccctggtatgattaatttaattactacaaatgcagtgtcttatgaaaaatataaactatctaaacatattttattgtcaattcttcactctagggatgtggccgctggagctctgattcttcgggaagctggtggttttgtttttgatccgtaagttacactgtttagtcaatgtcatagtagaatcaggcagcgtgagtatctattattaattgtttgttccattctggcttgtaggagtggtggggagtttgatctgatggcacgaagaatggcaggatcaaacagctatctgaaggatcaattcatcaaagaattgggagatacaagttgaacaacatattcctcaacatgaagtagaataagaatataagatcgccctgccaattttattggggcaaattttctttctagtggttctgcataaacagcatgcctgttgcggaaaagttttggacgcagtatggcattgtattgtttgaaacttttttttttttggcactactatccggtgttacttcggaaactagtgcatcgaagattcgaagtagcttaatcagaattttgaaccgaatgttcagatggattgtgcaatgtgcatttccccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0587000, RefSeq:Os03g0587000