Os10g0324600

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0324600| Description = Zinc finger, U1-type domain containing protein| Version = NM_001070885.1 GI:115481513 GeneID:4348318| Length = 4731 ...")
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Gene Name

Os10g0324600

Description

Zinc finger, U1-type domain containing protein

Version

NM_001070885.1 GI:115481513 GeneID:4348318

Length

4731 bp

Definition

Oryza sativa Japonica Group Os10g0324600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9177642..9182372

Sequence Coding Region

9177686..9178114,9181453..9182037

Expression

GEO Profiles:Os10g0324600

Genome Context

<gbrowseImage1> name=NC_008403:9177642..9182372 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9177642..9182372 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactacggcgccgccgcctctcacgccgccgccgcggggccgccgccggcggcggatccccaccacccgcactaccctcacccctacgccggctacccttacccctacgcggcgtacaacccggccgcccccgcctcggagcccgccaccgccgcctcatcctcctactactaccccaccgcggtctccgccgccgcctctgccggccagtacgacccctacgcggcgtaccagtactacgctgaccccgccgcggccgggccaggcagcggcggcgccgggggcctgccggggtactacttcggcgccggtgaggcgtttcaggccccggcatcgtcggcgtcgcagggtgctccggcggctaccgcggcggctggcaaggaggccgggaagcactttgggttcgatcctcagcgctacgcgcaggcagcagccgccagatcttcgaatggagtggcaccagcaattgcagccccaggcatgcaccctgctcagtggaatgcccatttcgggcatcctgtgccgaaaattgtttcaagaaagcatataaagaaaaagccaaaggttgtgcaaccattgacttgtgaagtttgcaagattcagtgcgatactccagaagttctaaggatccataagacgggaaagaagcacaagaaaaacttagagaggctacaagactctatcacacctaaaccagtaaagcctccaagtactccaaacactgttgctcttgcagcaaatatggcacctgatcctgtcactactagtgtcactaccagtgtgattcctgctgcacaaacgaagaagaagaagagtgctgcagcaaccccagaggaactggaggtgaagaggaggcgtgtacttgacgctggagcagctcaaggagaagtgaaaatatgtaccgtgtgcaatgtggtcgtcaacagccagaaagtttatgagtttcacataattggtcagaagcataaggccatggtacagaaacagcaagcgcagccacctatagcctga</cdnaseq>

Protein Sequence

<aaseq>MDYGAAASHAAAAGPPPAADPHHPHYPHPYAGYPYPYAAYNPAA PASEPATAASSSYYYPTAVSAAASAGQYDPYAAYQYYADPAAAGPGSGGAGGLPGYYF GAGEAFQAPASSASQGAPAATAAAGKEAGKHFGFDPQRYAQAAAARSSNGVAPAIAAP GMHPAQWNAHFGHPVPKIVSRKHIKKKPKVVQPLTCEVCKIQCDTPEVLRIHKTGKKH KKNLERLQDSITPKPVKPPSTPNTVALAANMAPDPVTTSVTTSVIPAAQTKKKKSAAA TPEELEVKRRRVLDAGAAQGEVKICTVCNVVVNSQKVYEFHIIGQKHKAMVQKQQAQP PIA</aaseq>

Gene Sequence

<dnaseqindica>45..473#3812..4396#gccgcgatctgacggtcgcgcactcgcactcgcaccgcaccaacatggactacggcgccgccgcctctcacgccgccgccgcggggccgccgccggcggcggatccccaccacccgcactaccctcacccctacgccggctacccttacccctacgcggcgtacaacccggccgcccccgcctcggagcccgccaccgccgcctcatcctcctactactaccccaccgcggtctccgccgccgcctctgccggccagtacgacccctacgcggcgtaccagtactacgctgaccccgccgcggccgggccaggcagcggcggcgccgggggcctgccggggtactacttcggcgccggtgaggcgtttcaggccccggcatcgtcggcgtcgcagggtgctccggcggctaccgcggcggctggcaaggaggccgggaagcactttgggttcgatcctcagcgctacgcgcaggtcaggatccaccctgcttctcttttgattcaatgtcccttagttcctgattgttttgtggtgaattcaggcgtgttagggtttgagatgtcatttttaggcataaattaagaatttgatggcctattggcgattttctcgctaagggattacctgttattcgattagtcctaacttggttttatatgtgagactcagacatttgcatggattaggtgttttccacattgtttagttcatccgttggtagcggttgtggaatcatggtactgtgaagcacaattctttcgtgcaaactgaaatgttctgtggcatgggagttttttgcttccatgaaagactcttgtttgtggataagccaagacacacgaatttcagtttgttccgtgaaatcttaaaagatgatgaatcgattaaatcgaagccttgttttgaaggataacatacattctatattagagataagatttgtaaaaatatatggcatatatggcatatattagagataatatttgtaaaaagatttgtaaaaatatatggcgtatattgagtactattcacttgaccactaccgtgccacccaaagcttaggcagcctactcagatacttgccacagtttcatatgcctattgcctacgcgcaattcctttggacctcacagtgagacatattaagtgtatactgcatcctaagtaatggcaaaacttgcatcctaattttttggctatcacgtaacctcattttttttttacttggtgaaacattcattctttttacctgtcctcatttgactatctggagttcgatcttatggtttccgtatcgttgaaacgcattgatattggagatattggagaacttatgcctgtatggttaactgaataacttatgtttttagttgggttggtttcctttgaaacaattgtagaaaatgtcattctggacatacttcatggcaaacttccaaaactgaatatttgaaatagttaatttgggtctttaaattcatatgtttggattgtgctaaaaagcactttcataatattacaattttattgggttttacatatataatacagtagaaacaagtggtaacttgcctgacctgacaccatgtttcaaatatgcgaagtctggttttaattaatttatttattaatgtttatgttatttgtatttattatgtgccaaccaaaggattgtatcagcatatggtagcaggagttttgtttcaagaaagttaaaagataatcaagtataccatttgcctgttatagttattttagcctgttgtatgtttttttcatgtttgaaaaactttgctaacttggttacaccagttcacttctttcagtaaagttcatgtcttattgtgtggacaccgttgggacatatagaaatagaaatttcatttctgaggtccttgagattgttttcttcaattgcacatgttggaatgtcgggcaaaagattgcagcaaaacaaaccatatacagtcttcaagattagtcattcgatatgttactactgtggtgattatagcattctattctatgatgaaaaaccaattagaacaataataataactcggttgttgtagttgtaattgcacacttggatcacaattcacaccacaaagttgatcttgtcaaactatgaaacaaatacaataaattaatcaatatgcactcaattgcttgtggtgatcttacaatatgtgtttatgaagatatgtcttatgtcatcctgaaacttactatcctctgtactgattaaagtaaggcattttgaaaattaaaataaagcagtgctctaatatctgaatctagactactactactgattaggtttttagtaaaaggttgctgattttcttctttgctagatgtctctgtagagtttagacagccaatgcatcaattgagcaatagttttggtggtctgatttgatgttcatgcacgttgtaatgctcccataccacactgcttgcgttggcacgttttgttggaatgcgacatatgattcctcagttagttctcttatttctgcaaatctaaagtgtgtatttacatagaaggcagcaaaggcaaaagttgaagcatctctcatcttgcagtcagatcttagttacttgaactttgcttatgctcctcagacagcaactactgtagttcctattattgacgtgttttctggaggtcccaataaattcaaggttaacaagccaagctatagaacatgtatggtctgcgagtgttatatgattaaaaaacttacaaaatatttttttgctgaaaaagatgaacatataattgaaataatctgtcaatatatttatttgttagagccatgatgtataatatataatccatttggtattttcttatttttccctccaaataatctgtttcagtggagttcatgttgagcttgctgtaatttctcgtcattaaagtggttttggtccctatctgccatagtgtcagcagaaagcaagagttgtgacctatttaaggtcatgtatggtacaactatagatcccagatcaacgctggatttgaagattgtatgtcaaattatagttgtttaaaattttatatttcatataaaatgggaataaaatgattaatccaaatgttatcaacgtaatcgtagatctaaatctatggatttgtggagctagaaatactcagctccaataaatctcgaatccggagctgtgccaaatagaaccttaagtatggatcaagtgaacattattagtagtatgtgaagcttttcctgcacaacacagcagaagtcttggatcaagtgtccgttggaacaatcaccttggaaaataaatcatacctgttgtgactagaagaaatttgtaaataatgctaaaataatcgacttataacgatacatgttgacataggatgagaacaaaaatccttgtattattttagagctcattctctctatggaagctttactgactcttatcaaagattaaatgttccatagattgtgttttgtttattttgttttccttctatatgcaatccttataatatgtgtcattctggtataacacacgtgtgtcatttttaattcctgtagttgattttagatttttagccttaagcatttgctgaacctatttaggatatgtcgcatctatccttcattcatttgccaaaatcctgtttaaatccataattctgtttgtcttgtaattgtttgtttatgtgccatatcttatcaaggagggagctataagtctgctggttatctgttttatattcatacttattctttgcttttagcttcacaacaacaatgtatctgtaggcagcagccgccagatcttcgaatggagtggcaccagcaattgcagccccaggcatgcaccctgctcagtggaatgcccatttcgggcatcctgtgccgaaaattgtttcaagaaagcatataaagaaaaagccaaaggttgtgcaaccattgacttgtgaagtttgcaagattcagtgcgatactccagaagttctaaggatccataagacgggaaagaagcacaagaaaaacttagagaggctacaagactctatcacacctaaaccagtaaagcctccaagtactccaaacactgttgctcttgcagcaaatatggcacctgatcctgtcactactagtgtcactaccagtgtgattcctgctgcacaaacgaagaagaagaagagtgctgcagcaaccccagaggaactggaggtgaagaggaggcgtgtacttgacgctggagcagctcaaggagaagtgaaaatatgtaccgtgtgcaatgtggtcgtcaacagccagaaagtttatgagtttcacataattggtcagaagcataaggccatggtacagaaacagcaagcgcagccacctatagcctgaggtggaaagcaactatgcttgctcatttttctccggttctattttgttgcaacagagaacagaatgcacaagctcctgtactcctaatgaatgtaacttagctaaactgcttgaagattatttgggctctttgtgcctgccgcagataagtagtcggagtttggagcgaaggttgtcttgtgcctgtcttccagttgtttattgaccaatccaagattgcagaatgttgccctcgctatgtgaatttagccctgttgtttaatgacaaaacgtcaattcgaaattgtatatttcaccgtcggatgatactccctttgttcaagaatgtgtttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0324600, RefSeq:Os10g0324600