Os03g0587600

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Revision as of 12:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0587600| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001186584.1 GI:297722298 GeneID:9268542| Length = 225...")
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Gene Name

Os03g0587600

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001186584.1 GI:297722298 GeneID:9268542

Length

2259 bp

Definition

Oryza sativa Japonica Group Os03g0587600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22461207..22463465

Sequence Coding Region

22461207..22463465

Expression

GEO Profiles:Os03g0587600

Genome Context

<gbrowseImage1> name=NC_008396:22461207..22463465 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22461207..22463465 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagattatgcaacagctcgccgccgccgccaccgccaccgccaccgccacggcaacgcccctgtgccttcctgaaccccctccgacggcgatgacgacggcgcaggtggaggccgccatcgcgacgctgcacggcaagaagcagggcctccgcgaggcctacgacagcctcgtcctccactcgcccatccccctccccttccgctggtccgacctcgactcccacctctcctccctccagtcctccatccacgcccgcttcagccagctgcaggccctccaggcttcccgccccgcgccccccgccgccgccgccgcgagccacgacgaggacgtcgagatggaggacgtccaggaacagggagaggacgaggtgatggcgcctccgtctacggtgcaggtcaaggaggagcctgtggaggcggcggcatgcgcgtcgaataccgccggcgagcgtgccggtgtcgggcaagatgggttcgttcgacccggcgggatggcggcggcgaagatggcgtctccgtcaaaggtgcaggtcaaggaggaacccgtggaggtgagtccatctcctccggccggcgccacgggtcttacggcggcggcatgcgcgagcatggacgccccgagactaaccgacgtctgcaagcgcgccggcggtggcggcggccaaggtttgtgcgcgcgaaacggtagtggtacagcgcagtcacccccgatccctagttgccctgtgctccagcagcagcacacggccggcgccccgaacggcagccaccctgtgctacggcaacacgccgctaacgccatgaacgccggccactcggccgcgttccggccgcagcagcacatgggtaaaccccgggacacgtgtgacttgcggaaggccgccgcaccgaacaccggagatcgcctgccgctgcaatggcggcagcagcgcgtgcacgctaatctcacgtgccccttgccgccaccggtggtcgcgggctcctcctcctcgccgccacagcagcgcgtgggcgtgttcccctcgccaacgccgcagatcgtgggctcctcgccgccgccgccatcacaggcgcgcgtgggagaggctaatgtaacgaacccatcgcggcagcagttcacagctagcgcgccacacgcgggcgatggccagctccagaagcggccgccgtggcagcggctgcagcgcgtgggcgtggctaatcccatgaacgccggtgacctgccgccccagaagccgcacttcacggccaacgcaagaaacgccggagaacacccgttccaggagcagcagcagccgccgcccgtggccaaacccacggacgccgccgccggtgacctgcttcctcagcagaagcagttgatggccaacgcaccaaacgccggagaacacttgctcccggagcaacagaagcagcagcccgtgacagctgcaaaacccgcgaacgcgccgcctctgcagcacgcggcgaacgccaccaacccagccgttctccggcggcagcggcagcggcagtgggttcgacttcgaccaccgaccgccactaacctgccgcaaacgaagcaggagcagcatcatctgttcatggctgacgacggcgccaacgcccgcaatcccctgtcgccgccgccgccgtgcggcatggccaaaccccccaactccggtgacccgctgacggatcagaacaatcagcagctcatggcgaacacccactctgcccctacaccggtttccacaccattggttgcatcgaaccagagtgaatcatcagccatgacgacgacgacgacgacgaacagcaaccaaaactccggcggcggtcgcaccggcccgcaacccgtagcggccggcgctgctccaaatccggccggcaaccagcagcaagggcagcggaaaggtggtgcaaacaggcgaggcggacgaggccaaggcaacaagaacaacaacgttgctaataccaatattagcaacatgagcaaggtgattggcaagggcaacaaggggcagggcaatggaaacccccagctcaacaagaatgggaacccccagttcaacaagaacgtgccgggtgatcatcaccagaagaacaagaatgcagggcagctttgctacaggtgcgggtgcagggggcactggtcgcgcatctgccgcactcctgagcatctggtgaagctttatcagcaggacagaaaggccaaactgcaagcaggagcgaatacgaatacggtttatgtgggagccatgacggattag</cdnaseq>

Protein Sequence

<aaseq>MEIMQQLAAAATATATATATPLCLPEPPPTAMTTAQVEAAIATL HGKKQGLREAYDSLVLHSPIPLPFRWSDLDSHLSSLQSSIHARFSQLQALQASRPAPP AAAAASHDEDVEMEDVQEQGEDEVMAPPSTVQVKEEPVEAAACASNTAGERAGVGQDG FVRPGGMAAAKMASPSKVQVKEEPVEVSPSPPAGATGLTAAACASMDAPRLTDVCKRA GGGGGQGLCARNGSGTAQSPPIPSCPVLQQQHTAGAPNGSHPVLRQHAANAMNAGHSA AFRPQQHMGKPRDTCDLRKAAAPNTGDRLPLQWRQQRVHANLTCPLPPPVVAGSSSSP PQQRVGVFPSPTPQIVGSSPPPPSQARVGEANVTNPSRQQFTASAPHAGDGQLQKRPP WQRLQRVGVANPMNAGDLPPQKPHFTANARNAGEHPFQEQQQPPPVAKPTDAAAGDLL PQQKQLMANAPNAGEHLLPEQQKQQPVTAAKPANAPPLQHAANATNPAVLRRQRQRQW VRLRPPTATNLPQTKQEQHHLFMADDGANARNPLSPPPPCGMAKPPNSGDPLTDQNNQ QLMANTHSAPTPVSTPLVASNQSESSAMTTTTTTNSNQNSGGGRTGPQPVAAGAAPNP AGNQQQGQRKGGANRRGGRGQGNKNNNVANTNISNMSKVIGKGNKGQGNGNPQLNKNG NPQFNKNVPGDHHQKNKNAGQLCYRCGCRGHWSRICRTPEHLVKLYQQDRKAKLQAGA NTNTVYVGAMTD</aaseq>

Gene Sequence

<dnaseqindica>1..2259#atggagattatgcaacagctcgccgccgccgccaccgccaccgccaccgccacggcaacgcccctgtgccttcctgaaccccctccgacggcgatgacgacggcgcaggtggaggccgccatcgcgacgctgcacggcaagaagcagggcctccgcgaggcctacgacagcctcgtcctccactcgcccatccccctccccttccgctggtccgacctcgactcccacctctcctccctccagtcctccatccacgcccgcttcagccagctgcaggccctccaggcttcccgccccgcgccccccgccgccgccgccgcgagccacgacgaggacgtcgagatggaggacgtccaggaacagggagaggacgaggtgatggcgcctccgtctacggtgcaggtcaaggaggagcctgtggaggcggcggcatgcgcgtcgaataccgccggcgagcgtgccggtgtcgggcaagatgggttcgttcgacccggcgggatggcggcggcgaagatggcgtctccgtcaaaggtgcaggtcaaggaggaacccgtggaggtgagtccatctcctccggccggcgccacgggtcttacggcggcggcatgcgcgagcatggacgccccgagactaaccgacgtctgcaagcgcgccggcggtggcggcggccaaggtttgtgcgcgcgaaacggtagtggtacagcgcagtcacccccgatccctagttgccctgtgctccagcagcagcacacggccggcgccccgaacggcagccaccctgtgctacggcaacacgccgctaacgccatgaacgccggccactcggccgcgttccggccgcagcagcacatgggtaaaccccgggacacgtgtgacttgcggaaggccgccgcaccgaacaccggagatcgcctgccgctgcaatggcggcagcagcgcgtgcacgctaatctcacgtgccccttgccgccaccggtggtcgcgggctcctcctcctcgccgccacagcagcgcgtgggcgtgttcccctcgccaacgccgcagatcgtgggctcctcgccgccgccgccatcacaggcgcgcgtgggagaggctaatgtaacgaacccatcgcggcagcagttcacagctagcgcgccacacgcgggcgatggccagctccagaagcggccgccgtggcagcggctgcagcgcgtgggcgtggctaatcccatgaacgccggtgacctgccgccccagaagccgcacttcacggccaacgcaagaaacgccggagaacacccgttccaggagcagcagcagccgccgcccgtggccaaacccacggacgccgccgccggtgacctgcttcctcagcagaagcagttgatggccaacgcaccaaacgccggagaacacttgctcccggagcaacagaagcagcagcccgtgacagctgcaaaacccgcgaacgcgccgcctctgcagcacgcggcgaacgccaccaacccagccgttctccggcggcagcggcagcggcagtgggttcgacttcgaccaccgaccgccactaacctgccgcaaacgaagcaggagcagcatcatctgttcatggctgacgacggcgccaacgcccgcaatcccctgtcgccgccgccgccgtgcggcatggccaaaccccccaactccggtgacccgctgacggatcagaacaatcagcagctcatggcgaacacccactctgcccctacaccggtttccacaccattggttgcatcgaaccagagtgaatcatcagccatgacgacgacgacgacgacgaacagcaaccaaaactccggcggcggtcgcaccggcccgcaacccgtagcggccggcgctgctccaaatccggccggcaaccagcagcaagggcagcggaaaggtggtgcaaacaggcgaggcggacgaggccaaggcaacaagaacaacaacgttgctaataccaatattagcaacatgagcaaggtgattggcaagggcaacaaggggcagggcaatggaaacccccagctcaacaagaatgggaacccccagttcaacaagaacgtgccgggtgatcatcaccagaagaacaagaatgcagggcagctttgctacaggtgcgggtgcagggggcactggtcgcgcatctgccgcactcctgagcatctggtgaagctttatcagcaggacagaaaggccaaactgcaagcaggagcgaatacgaatacggtttatgtgggagccatgacggattag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0587600, RefSeq:Os03g0587600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0587600&oldid=19710"