Os03g0588800

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Revision as of 12:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0588800| Description = Frigida-like family protein| Version = NM_001057114.2 GI:297601238 GeneID:4333352| Length = 2211 bp| Definition = O...")
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Gene Name

Os03g0588800

Description

Frigida-like family protein

Version

NM_001057114.2 GI:297601238 GeneID:4333352

Length

2211 bp

Definition

Oryza sativa Japonica Group Os03g0588800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22521598..22523808

Sequence Coding Region

22521598..22521756,22522732..22522872,22523479..22523808

Expression

GEO Profiles:Os03g0588800

Genome Context

<gbrowseImage1> name=NC_008396:22521598..22523808 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22521598..22523808 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaccaccagacaacatcgcggcaacgaggctactgaacattgtgctggcaactgccgcaatagtgccgccagacaaaactgtggccgagaggatgtccaaggagctgtcagccacgagcccaatgtgtgtgtcaccgccatcaagactaagtcaattaatcgtctgatgaagagaagggaacacatcgatgctgtcaaagtggctcgtgctttcaatttgattgataagttccctccagtttctgttatcaaagcatatgttgaaaaagtaaaagaggctgctcaagacatggatcgcgctatgcaagaggatgttgctgctctgagatctgctaaggaagcaattgaagcgcatgacagtggatctgactaccgctacactataatgcaagaagtccacaagttgatgagatcttatgagaagaagaaacggagtttatcttttggttccacctcaagttcacatgagcacaagaacaagaggcacaggagcaatcaggctatgcctcgttgggaaaaccaaaccataccaggtcctcctgtatattttccagtccctcctccatattttggtcactacaatccttatcacccctttggtccacaacctcgtcgtaattaa</cdnaseq>

Protein Sequence

<aaseq>MAATTRQHRGNEATEHCAGNCRNSAARQNCGREDVQGAVSHEPN VCVTAIKTKSINRLMKRREHIDAVKVARAFNLIDKFPPVSVIKAYVEKVKEAAQDMDR AMQEDVAALRSAKEAIEAHDSGSDYRYTIMQEVHKLMRSYEKKKRSLSFGSTSSSHEH KNKRHRSNQAMPRWENQTIPGPPVYFPVPPPYFGHYNPYHPFGPQPRRN</aaseq>

Gene Sequence

<dnaseqindica>1..159#1135..1275#1882..2211#atggcggccaccaccagacaacatcgcggcaacgaggctactgaacattgtgctggcaactgccgcaatagtgccgccagacaaaactgtggccgagaggatgtccaaggagctgtcagccacgagcccaatgtgtgtgtcaccgccatcaagactaaggtgcaggagcaagatctcactaccacactatcgggaagctactgcgggggcatcatgcgaggacccctaatgtcgcctagctccctcgagctcgtctgccccgttgccttgccttggtattgtagattcttcgctactatcgccttgctgctactagccactacccaccgagaagaagacacgggatcccatcggcctctctacgctgccatagtaaggagaggagagaaagaaagagagaagagaagagggagaggaaggtggctggcaagtgggccccaattttttttactttttccctagtcacttacatgtgagccccacttctaatttgcgacaaggctgccatgtcagcacaaatgaaccaagtcaacctgccacgtcagtggaaaccactcttataaccgctgagagtcaaattgcaccattttaaatagttggggaggagggggggggggtcaaaatatccgatattgcggttgagggatacgaatcatattagaactatattgagggagtcaaagtggacttattctagtttacaatgcatttgtgcaattgtgcaagcgtgctaaaaatatatccaatggatcttaagtcctaggtgctgggatatggcccaggtttcttagggcctagtccacccttggtccttatgacataagtcataatttcttccaccatcttttggaggcgaagtggattccagttgcgaagtctctgacgagccgcaaaagacaatgagctgaaagaactaattgtttgagtatgcattctgtcagaatttctattttaaatcattttgagctttaggacataagcagcaaacatgattcataaatggtttgctatgcctgtttttttttcgttttttgaattcacatctctactctgttgagcattattctctatttttcaggaagtgactggtggcattgctgatactttacgatgttcactgtcttatttgcagagtcaattaatcgtctgatgaagagaagggaacacatcgatgctgtcaaagtggctcgtgctttcaatttgattgataagttccctccagtttctgttatcaaagcatatgttgaaaaagtaaaagaggctgctcaagacatggttagcaaggacgcagtttcactgcaggcattggtatacctttcatctggttaactgggacaatgggggatttgtttcctaatttacttctttaactaattatgccatctagatttaattatgctagatatatgcacacatgtttgctatagacaaaaaagaattccacatgctctaatgttctttgaatcaaatgatttttcttttttttttcattcaacacatcttcagtattttgttaatttttgttacaggtagcacttggtgacttttacattactctaattatagatttagcatttatatatgtgacaatttcatcataagacctttatgtgataaacatatatttgagaacaaataagattcactacaaccaacacaactgttgcattcttttacaaggagtatagatatgaattgtgttactcttttgcagccaggaaatccttttacattgcaaaggagtaatataatcatgatacatacagctgtattgtcatgaacagaaaatgattaattcatcatgtttcatgaaagaaaattaatctcttttccagatatttggtaatttctaaattggtataatgtactgtatgccatcaggatcgcgctatgcaagaggatgttgctgctctgagatctgctaaggaagcaattgaagcgcatgacagtggatctgactaccgctacactataatgcaagaagtccacaagttgatgagatcttatgagaagaagaaacggagtttatcttttggttccacctcaagttcacatgagcacaagaacaagaggcacaggagcaatcaggctatgcctcgttgggaaaaccaaaccataccaggtcctcctgtatattttccagtccctcctccatattttggtcactacaatccttatcacccctttggtccacaacctcgtcgtaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0588800, RefSeq:Os03g0588800