Os03g0598600

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Revision as of 12:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0598600| Description = Bacterial immunoglobulin/albumin-binding domain containing protein| Version = NM_001057145.2 GI:297601266 GeneID:4333...")
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Gene Name

Os03g0598600

Description

Bacterial immunoglobulin/albumin-binding domain containing protein

Version

NM_001057145.2 GI:297601266 GeneID:4333385

Length

7260 bp

Definition

Oryza sativa Japonica Group Os03g0598600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23074565..23081824

Sequence Coding Region

23074565..23074684,23074757..23075941,23076686..23077141,23077309..23077386,23077650..23077700
,23077790..23077861,23077946..23077947,23078733..23078837,23078948..23079029
,23079458..23079507,23079794..23079847,23080364..23080444,23080847..23080936
,23081164..23081244,23081584..23081824

Expression

GEO Profiles:Os03g0598600

Genome Context

<gbrowseImage1> name=NC_008396:23074565..23081824 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23074565..23081824 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctagaggaagagaaagatcccccaaaacatcaatccaaaatcaagatgaattcagaagagatcaagaagagaaagatacgcttaggaaaagatcaagatccagaaaagaaggaaatgtcaggaaagaatatcaaatctatcaaagaaactggtactaaaggtcaatccaaagaactccaaaaaaaagaatcgaagagcagaaagagcacaaaagacaagtccaagaagaacaaagatatgactcaagtttcagcaaatgcagaagaatttcacaaggaatacaccaccaaagtgatcagaaaagaatcaagaacagattcatcaagcatagaacaagtcatcggttcttcaagcatacaggaaatggagacaaatgaacaagtaaaatcaaaagacacttccaaagatatgactcaagttccagcaaatgcagaaggaattcacaaggaatacaccaccaaagtgaatagacaagaatcaagaacaggaaacaaagataatggacaatcagggagaagcatttctttagacacaaaaaaagatgttaatttgaagtacaaggatgatggactaattttgggaaaagcaaagatattctccaaatatcacagtgaaataacttattatatttttaatttctatgaagcaggaagaagtatttctttggatacaggaaacaaagataacaaagatgcagaaagaagcattcagcatggaaacattcagaatatgactcaattagttttgacagaacataacgcaaatacattgatttcaggagctcaaaatttttcatatacaagtctcatggaacaaattatatcatctcaaccttcaatatctgaagttcagcaagaaatatcaacagaatcaaactttgttgctacaccaagagcatttcaggttgaagatgaggatctggaagataatgaattggaaaattggaatcttgatatgttcaatctgtcaaacggtcaaaatgtgcaaaattcagctgacaacagtactgaaattggaaatcaagcaacaacaaatgttgatacagtggaaagtaatgatttagatgcaaatggagaaatgttgacagaagaagatataaacaattttttggagcaagaacaagaagaagctacaaaaggaaataatgcagcaattgatgcgaagtacattccaagagttgatatgcagttcaaatcaattaaagaagcacacgatttctttaacttttatgctttgttggctggattttctgttgtcattgctcacagttaccacagtacaagcaaaaaaaggaatggagaagtgattagagtaacattcaaatgcaatcgacatggaaaagcaaagtcagaatcacaagaagaagaaacagaagagacagtagtagcagagagaaacaataatgagattaaagccacaagttgtaactgtgcactgtcaaaagaagggttgtatgatgagtatgaggatataatgaacaattcagttactgaagaagaatttgaatatttgtggaatgaaatggttgattcctatgaggttcagcacatctactttttgaagcacatgtggtcaattagaaagagattcataccagtatacttcaaaacaaatttttgtccattcataaaaagcacagctctaagtgaaggtacaaattcaaggtttaagaaagatgttggtccacaatacagtataataagctttttgatagaatatgtcagagtaatggacactattcagaatttggagcagctagatgatcataattcaaggacaaaaaggccaagcaaactttggtctcattactacattgagtaccaagctgtcaagctgtacaattcaaaaatattcaaaaagttccaagttgaacttaagaggacaacaagattacaattgattgaggtcgagaaattgaagacttatgaagtttttcttgcattgaatcagaaaataaaagtagtaagaagaaggaagtaccttgtaattgttgactctgaaaaggaggaatacacttgtatttgctcaaaatttgagaaagatggccttctttgctcccacatattgaaaattatgcttcacctcaacattatgaagattccaaagaaatatattatcgatcggtggagaaaaaaggattacaaagaaaaatatgattttgaagatagaattatacctttatcggagagctcaatcctcagattcaatattctgtcaaggaaatgtgctgaaatagcctcacaaggatcaaaaagtattgattcgttccaatttacagttgatcagattgacaagttagaaaaagaatcaatatcaatgaattcagagcaaagaacaaagcagcaaatggagatagacaaaatagatacaacaaatggagaagtcattgaagaaacagaagaaaacaatgaagaaattttgatagatccagacatagcaaagtcaaagggaagaccatctcaaagatacaaatcatttagagaggaattacagagtaaagaagtttatcattgcagttattgtcaacgaacagatcacacttttccaacatgcccactaaagcacattgaatttgatttgccaagaaagaaaattagaaagacaaaaaacacagcacaaaagaatgcagaggaagaacaaactgatggttcaaagaagacaaataaagggaaaaaacaagaagcaacaacacaagtattaatggagcaaaaagggactaagaaaagaaagacagatggctaa</cdnaseq>

Protein Sequence

<aaseq>MELEEEKDPPKHQSKIKMNSEEIKKRKIRLGKDQDPEKKEMSGK NIKSIKETGTKGQSKELQKKESKSRKSTKDKSKKNKDMTQVSANAEEFHKEYTTKVIR KESRTDSSSIEQVIGSSSIQEMETNEQVKSKDTSKDMTQVPANAEGIHKEYTTKVNRQ ESRTGNKDNGQSGRSISLDTKKDVNLKYKDDGLILGKAKIFSKYHSEITYYIFNFYEA GRSISLDTGNKDNKDAERSIQHGNIQNMTQLVLTEHNANTLISGAQNFSYTSLMEQII SSQPSISEVQQEISTESNFVATPRAFQVEDEDLEDNELENWNLDMFNLSNGQNVQNSA DNSTEIGNQATTNVDTVESNDLDANGEMLTEEDINNFLEQEQEEATKGNNAAIDAKYI PRVDMQFKSIKEAHDFFNFYALLAGFSVVIAHSYHSTSKKRNGEVIRVTFKCNRHGKA KSESQEEETEETVVAERNNNEIKATSCNCALSKEGLYDEYEDIMNNSVTEEEFEYLWN EMVDSYEVQHIYFLKHMWSIRKRFIPVYFKTNFCPFIKSTALSEGTNSRFKKDVGPQY SIISFLIEYVRVMDTIQNLEQLDDHNSRTKRPSKLWSHYYIEYQAVKLYNSKIFKKFQ VELKRTTRLQLIEVEKLKTYEVFLALNQKIKVVRRRKYLVIVDSEKEEYTCICSKFEK DGLLCSHILKIMLHLNIMKIPKKYIIDRWRKKDYKEKYDFEDRIIPLSESSILRFNIL SRKCAEIASQGSKSIDSFQFTVDQIDKLEKESISMNSEQRTKQQMEIDKIDTTNGEVI EETEENNEEILIDPDIAKSKGRPSQRYKSFREELQSKEVYHCSYCQRTDHTFPTCPLK HIEFDLPRKKIRKTKNTAQKNAEEEQTDGSKKTNKGKKQEATTQVLMEQKGTKKRKTD G</aaseq>

Gene Sequence

<dnaseqindica>7141..7260#5884..7068#4684..5139#4439..4516#4125..4175#3964..4035#3878..3879#2988..3092#2796..2877#2318..2367#1978..2031#1381..1461#889..978#581..661#1..241#atggagctagaggaagagaaagatcccccaaaacatcaatccaaaatcaagatgaattcagaagagatcaagaagagaaagatacgcttaggaaaagatcaagatccagaaaagaaggaaatgtcaggaaagaatatcaaatctatcaaagaaactggtactaaaggtcaatccaaagaactccaaaaaaaagaatcgaagagcagaaagagcacaaaagacaagtccaagaagaacaaaggtgagtgaacagaaaaattctccaaatattacctgcttggttcttttcagaatttgattcttcttttggaatttgtttgatcagatctgtaaagaaaagttaatgaggttagaaatgtagaaactgattagatctaaaaaaatgaatctattctaatatgaactaaatagagtcaatctgaaagtaaatctgaccactgtaagtaaattgggcaaatcactgtaactgtcattttagaactgggcaaatcactgaaattttcagaatggtgaatagtgtgaatctgttctaatatgaactcatatagtcaatctgaatgtactgtcaatgattgtgcagatatgactcaagtttcagcaaatgcagaagaatttcacaaggaatacaccaccaaagtgatcagaaaagaatcaagaacaggtataaattattttcttgcctgatgagaagcaaaattaagatttgcttacattattttcagtcatttaacaattttcaaacaagttacagtgaaagaataataaaaatacatacaaaagaacactgtaattttagttcaatatgcatgtaactgcaggaaacactgtacaaattctaacaaaagcatgatctaaggcagttttattttcaaattgaaatggtttcagattcatcaagcatagaacaagtcatcggttcttcaagcatacaggaaatggagacaaatgaacaagtaaaatcaaaagacacttccaaaggtatgtattcctcatacttgacttttatttttgtttcatttcaaatattttagaaatcaccaattatcatagagtgaaattgtgtatttgcatgatagcagtatattcaaaagagcacataatggtcttaattttcacatatttgtctacaaatcaatatacaaactagttacagtcaaatatttataaaattacatagaaggaacactgtaaatttagttcaacaaacatgtaacttctagaagcagtacatatttcatatcaaatcaacaactaaaagcaaattttattactattcattacaacattataaggactatacaacaaatctaaaaaaaagtaattcaaagcaaaaatgaaatgtctagtattgactaaaacgtaacgtcaatgattgtgcagatatgactcaagttccagcaaatgcagaaggaattcacaaggaatacaccaccaaagtgaatagacaagaatcaagaacaggtataaattattttcttgcctggtgagaagcaaaattaagatttgcttacattattttcagtcatttaacaattttcaaacaagttacagtgaaagaataataaaaacatatacgaaagaacactgtaattttagttcaatatgcatgtaaatacagggaactttaaatctaaggcagttttattttcaaattgaaattgtttcagattcatcaagcacataacaggttattagtactccaagcatagaagaaatgcagagagaaaaataagcaaaaaactaagctgaaacacttcagctgaatctaataaaaaacaaaaacactaagctgtacaatggtactgaattcaattcaaaaactatttaatttcacaattaaaaattggtgctgaaatcagcaaattgaaacaaattatagttaaatagtaataaaattacatataaaaataaatgtaattctagtattagttcactgtaatttataatcttgtgttttaaaccttctgtttttttcaggaaacaaagataatggacaatcagggagaagcatttctttagacacaaaaaaaggtatacaaaaacaaaaaaatatcatatatatggcctcagaaattgtccacttcaattagtacaaaaaaaatggacatttcttagtattagactataatttttttcaatattcacataggcaaaatttttatcaattttgcaagctcaaaagaattagttagctatagattgtcaagcacctttttacatgcaccattctcaaaaactagtatataattcttgcacttcaaattagcatatataaaaacaaaaagaagctagtacactagattattttgctttacagatgttaatttgaagtacaaggatgatggactaattttgggaaaagcaaaggtaaaaaggtgcttgacaagtgaaggcaaaaatttcgcctatgatgatgagaagattttctttattattggtgctcttagacaagtaaacaaacaacacagaggacaataaaaaaaattgatatttaatataaagataaatttcagagttggcaaaaaagatattttcgctgaaactaatactaaatagagattcatcactggcctaaaactttaaaatacaagcacaaatcaatgcttctcccttcaaaataaaattacatataaaaatgactgtaattctagtattagttcactgcaaattatattcttgtgttttaaaccttctgttttttgcaggaaacaaatataatggacaagcagggagaagcatttctatggatacagagattataggtgaattttaatttgaatatttgttacatctagatattctccaaatatcacagtgaaataacttattatatttttaatttctatgaagcaggaagaagtatttctttggatacaggtactattaccactttgagttatatctttctttctttggatatatctatatatgtcaaatttaattactgatgtactgatttgaattatattacaaattatgttctgcaggaaacaaagataacaaagatgcagaaagaagcattcagcatggaaacattcagaatatgactcaattagttttgacagaacataacgcaaatacattgatttcaggtaagaaacataattagtttcaaatataatctgcaaagatcacatttagacaaaacatcatagttaaaataaaatttagctggtttgaatcatatattgtcaaaatatctgtcaaaaatagataattagtgatttcatgatgacataaacaatttcatttacaaataaatatgcagacactcatttactatgtagatattataattttcaaataagttacagtgaaataaaattaaaattacagttaagaaacactgtaattccaatattagttcactgtaactaatgaaaaaaattaacactttagttaaaaaaatatcacagagtgatattgtgtatttgcacagtcttaatggtcttaatattcatatatatgtctagtaatcaacataaaaacaaattacagtccaaaaattaaaaaaaaacatagaattaacactgcaaatagagttgaacatacatgtaactcctagaagcagtatatatttcatataaacaagtaaagcaatttgatttaccttttatttaattttgttggactctgcagcaaatctgaaaaattcagagaaaacaaatcattactttcatattttgagttatgtttatatgcagagactaaaatgagtaatgagtaatgagttatgtttatattttgagttatgtttatttgcaggcatctcaagaagaaataagcatcaacgacaagatgaaattaaatagagaaaaaacaaattcaagtgatgagtacaacaattgtactctacatgatgaatggtctcttttaggagtaagttttggaatgacagaatttataatatcaaacaaaaatcagcaatacatgtcataaaataaatttgttttcaatttgcaggctcaaaatttttcatatacaagtctcatggaacaaattatatcatctcaaccttcaatatctgaagttcaggtattttacaagtgtaataaatgtaatgttgaagacagataaacaatattattaatgtgtaaaactaacattttaaatttcaaatgcagcaagaaatatcaacagaatcaaactttgttgctacaccaagagcatttcaggtactcacatatttcataagaagaaagaaaatagtaaatatgtattaaattttaaataattgtcttattatttgaattactttttgtgtagaattcaatgatattgacaacaagtagaacataagatattccttttgatatggattatgctaatacaaatcaggtatgaattaatttatttttttgtttctataaatcgtatttgtgatacaattaatgtttgagtttacttatgatattatttgttctaactatttttaaaggttgaagatgaggatctggaagataatgaattggaaaattggaatcttgatatgttcaatctgtcaaacggtcaaaatgtaagatttactaagaacttttcattactgaaaattttacatttgaagaatgttattcaaatctaaaagataaaatttgatttgataataattgttgtgaaattaaagaaaaaaactttttaaaaaataattgtttgaaatatgaaattgaatttttgaataagcaggtgcaaaattcagctgacaacagtactgaaattggaaatcaagcaacaacaaatgttgatacagtggaaagtaatgatttagatgcaaatggagaaatgttgacagaagaagatataaacaattttttggagcaagaacaagaagaagctacaaaaggaaataatgcagcaattgatgcgaagtacattccaagagttgatatgcagttcaaatcaattaaagaagcacacgatttctttaacttttatgctttgttggctggattttctgttgtcattgctcacagttaccacagtacaagcaaaaaaaggaatggagaagtgattagagtaacattcaaatgcaatcgacatggaaaagcaaagtcagaatcacaagaagaagaaacagaagagacagtagtagcagagagaaacaataatgagattaaagccacaagttgtaactgtgcactggtaatttctaagagaaatttgatttggagaattataagggttaatttagatcacaatcataagatgagtccaagagatgaagttagattcttgaagtcacacaaaaatatgacaacagaagagaaaatgatgataaggacactaaaggaatgcaatattcccacaaggcatatgattgtgattttgtcaactttgagaggagggctgacatctttgccttatactaagaaggatgttagtaatgtgagaacttgtataaataaagagacaagtagcaatgatatgatgcaagttcttcaatttttcagaaagaagaaggagaaagatccaaagttcttttatgaatttgatttggatgagaataagaaggtgacaaatttgttttggactgatggaaggtcaattgactagtacgagaagtatggagatgttgttagttttgatacaacatatttcacaaatagatacaatcttccatttgctccatttgttgggatttcatgacatggaaatacaattgtttttgggtgtgcctttctgcatgatgagactgcagaaacatttaaatggttgttcataacttttttgaaagcaatgtcagaaaaagcataaaaaacaattataactgatcaggacggagctatgaggtcagcaataagacagatttttccaaattcaacacataggaattgcttctttcatatagtaaggaaagcattcaatctgtctggaactttgttcaagtcaaaagaagggttgtatgatgagtatgaggatataatgaacaattcagttactgaagaagaatttgaatatttgtggaatgaaatggttgattcctatgaggttcagcacatctactttttgaagcacatgtggtcaattagaaagagattcataccagtatacttcaaaacaaatttttgtccattcataaaaagcacagctctaagtgaaggtacaaattcaaggtttaagaaagatgttggtccacaatacagtataataagctttttgatagaatatgtcagagtaatggacactattcagaatttggagcagctagatgatcataattcaaggacaaaaaggccaagcaaactttggtctcattactacattgagtaccaagctgtcaagctgtacaattcaaaaatattcaaaaagttccaagttgaacttaagaggacaacaagattacaattgattgaggtcgagaaattgaagacttatgaagtttttcttgcattgaatcagaaaataaaagtagtaagaagaaggaagtaccttgtaattgttgactctgaaaaggaggaatacacttgtatttgctcaaaatttgagaaagatggccttctttgctcccacatattgaaaattatgcttcacctcaacattatgaagattccaaagaaatatattatcgatcggtggagaaaaaaggattacaaagaaaaatatgattttgaagatagaattatacctttatcggagagctcaatcctcagattcaatattctgtcaaggaaatgtgctgaaatagcctcacaaggatcaaaaagtattgattcgttccaatttacagttgatcagattgacaagttagaaaaagaatcaatatcaatgaattcagagcaaagaacaaagcagcaaatggagatagacaaaatagatacaacaaatggagaagtcattgaagaaacagaagaaaacaatgaagaaattttgatagatccagacatagcaaagtcaaagggaagaccatctcaaagatacaaatcatttagagaggaattacagagtaaagaagtttatcattgcagttattgtcaacgaacagatcacacttttccaacatgcccactaaagcacattgaatttgatttgccaagaaagaaaattagaaagacaaaaaacacagcacaaaaggtaaaaaagtatttattttaagaattctcatttgatttaaaatatttaatttgaatttgattgcaattgcagaatgcagaggaagaacaaactgatggttcaaagaagacaaataaagggaaaaaacaagaagcaacaacacaagtattaatggagcaaaaagggactaagaaaagaaagacagatggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0598600, RefSeq:Os03g0598600