Os03g0600500

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Revision as of 12:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0600500| Description = Similar to Beta-1,3-glucanase precursor| Version = NM_001186598.1 GI:297722326 GeneID:9271411| Length = 1723 bp| De...")
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Gene Name

Os03g0600500

Description

Similar to Beta-1,3-glucanase precursor

Version

NM_001186598.1 GI:297722326 GeneID:9271411

Length

1723 bp

Definition

Oryza sativa Japonica Group Os03g0600500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23183281..23185003

Sequence Coding Region

23183281..23183709,23184328..23184604,23184606..23185003

Expression

GEO Profiles:Os03g0600500

Genome Context

<gbrowseImage1> name=NC_008396:23183281..23185003 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23183281..23185003 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcatctacctccccaacgacaccatcctgcacgccctccgcggcaccagaatcgccgtcgtcctcgacgcccccgacgtccgctctctcgcctccaacgacgccaccaacgcgtcgtcctccgccgcgcaagcctgggtccaggccaacgtccggccgtactacccggacgtcaacatcaagtacatcgccgtcggcaacgaggtgaaagacggcgccgacaagcccaagatcctcccggccatgaacaacatcagagacgcgctctccgcggccggcctcggcggccacatcaaggtgtccactgccgttgaaatgagcttggtcgccggctcgccgctgccttccggaagcgcgttcgccgaccccccctccatcatgggtcccatcgtcaattcttggcgagcaaacggatcgccgctgctggccaacgtatacccctactacgcctacaagaacgacaacggcgtcgacctcaacttcgcgctcttccggccaagctcgacgacgatagatgacaacggacacacctacaccaacctcttcgatgccatggttgacagcatatactcggcaatggagaaggagggagggtcagatgtgcccgtcgtcatttccgagaccgggtggccatcggctgacggtcgtggcgcgagcaaggacaacgccaggccggcgacaagggtgctgatcggtgccagcgtcaccgtggccttcttgctcctgctcgtcttcttcttcatcatcttgccgcgcggcggcacaccgccggaggtggtatcgtcgtccaaggagggcgggatccgggggcgtcgcgatggcggcggtgtattccaggttgagagctatggggagaggtgcgagcacgtcgccgaggaggatggccatgatcgccggcgattcccgcgtgactacgtcgactacctgtacctgttcgactgcgtgttcggtgtggagcggcgggttcttggctacggcgtgatggcggcttggctcgccgtgctgttctacctgctcggtgacacggcggcggtgtacttctgctctagcctcaagggcctctcgtggctgctccgcctctcccgacgatcaccagcgtga</cdnaseq>

Protein Sequence

<aaseq>MRIYLPNDTILHALRGTRIAVVLDAPDVRSLASNDATNASSSAA QAWVQANVRPYYPDVNIKYIAVGNEVKDGADKPKILPAMNNIRDALSAAGLGGHIKVS TAVEMSLVAGSPLPSGSAFADPPSIMGPIVNSWRANGSPLLANVYPYYAYKNDNGVDL NFALFRPSSTTIDDNGHTYTNLFDAMVDSIYSAMEKEGGSDVPVVISETGWPSADGRG ASKDNARPATRVLIGASVTVAFLLLLVFFFIILPRGGTPPEVVSSSKEGGIRGRRDGG GVFQVESYGERCEHVAEEDGHDRRRFPRDYVDYLYLFDCVFGVERRVLGYGVMAAWLA VLFYLLGDTAAVYFCSSLKGLSWLLRLSRRSPA</aaseq>

Gene Sequence

<dnaseqindica>1295..1723#400..676#1..398#atgcgcatctacctccccaacgacaccatcctgcacgccctccgcggcaccagaatcgccgtcgtcctcgacgcccccgacgtccgctctctcgcctccaacgacgccaccaacgcgtcgtcctccgccgcgcaagcctgggtccaggccaacgtccggccgtactacccggacgtcaacatcaagtacatcgccgtcggcaacgaggtgaaagacggcgccgacaagcccaagatcctcccggccatgaacaacatcagagacgcgctctccgcggccggcctcggcggccacatcaaggtgtccactgccgttgaaatgagcttggtcgccggctcgccgctgccttccggaagcgcgttcgccgaccccccctccatcatgggtcccatcgtcaagttcttggcgagcaaacggatcgccgctgctggccaacgtatacccctactacgcctacaagaacgacaacggcgtcgacctcaacttcgcgctcttccggccaagctcgacgacgatagatgacaacggacacacctacaccaacctcttcgatgccatggttgacagcatatactcggcaatggagaaggagggagggtcagatgtgcccgtcgtcatttccgagaccgggtggccatcggctgacggtcgtggcgcgagcaaggacaacgccagggtgtacaaccagaacttgatcaaccatgtcggaaagggcacgcccaagaggcccgtggcattggagacttacatattcgccatgtttgacgagaaccagaagaagggagatgccatcgagaggaataagttcacttcatgaccgttaagagtgatcgaaatctaatccgtgaccataaaccacaaaaccagatatctcgaccccccaaactcttaaaaccagtgcaatttgactcccttggtggttttagagagcggttttgctgacgtgacgccacgtggcacctacgtggcaatattgaccgagcctttgatccacgtggcgtttgacgtggcacttacgtggcattaaaattaaaaaatttacgtgggacccgtttgtcattcacacacagaaaaatgtggggcccactaactgtgggacccacatgtcagtcctcctccctctctcccttctctctctttttctctccccttcttcccctttggccggcggcagggcatgggctgcggtgtggcgccgcccggcgggagctgaagcggtccccacagtggaggagtcgacgatggcgaggccagctctcggcgagatggggtcggcgtctgttcttcgcactagccggcgacaagggtgctgatcggtgccagcgtcaccgtggccttcttgctcctgctcgtcttcttcttcatcatcttgccgcgcggcggcacaccgccggaggtggtatcgtcgtccaaggagggcgggatccgggggcgtcgcgatggcggcggtgtattccaggttgagagctatggggagaggtgcgagcacgtcgccgaggaggatggccatgatcgccggcgattcccgcgtgactacgtcgactacctgtacctgttcgactgcgtgttcggtgtggagcggcgggttcttggctacggcgtgatggcggcttggctcgccgtgctgttctacctgctcggtgacacggcggcggtgtacttctgctctagcctcaagggcctctcgtggctgctccgcctctcccgacgatcaccagcgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0600500, RefSeq:Os03g0600500