Os03g0605300

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Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0605300| Description = Similar to Subtilisin-like protease (Fragment)| Version = NM_001057169.1 GI:115454066 GeneID:4333413| Length = 2517 ...")
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Gene Name

Os03g0605300

Description

Similar to Subtilisin-like protease (Fragment)

Version

NM_001057169.1 GI:115454066 GeneID:4333413

Length

2517 bp

Definition

Oryza sativa Japonica Group Os03g0605300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23463199..23465715

Sequence Coding Region

23463245..23465542

Expression

GEO Profiles:Os03g0605300

Genome Context

<gbrowseImage1> name=NC_008396:23463199..23465715 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23463199..23465715 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaggctgctgctggtggcggtggcggtggcgatggcggcggtggttgtggcggcggaggagagggcgacgtacatcgtccacatggcgaagtcggcgatgccggcggagtacggggacgaccacggcgagtggtacggcgcgtcgctgcgctccgtgtccggcgccgggaagatgctgtacgcgtacgacaccgtgctccacggcttctccgcgcggctcaccgcgcgggaggcgcgcgacatggcggccatggacggggtgctcgccgtcaacccggaggcgaggtacgagctgcacaccacgcggacgccggagttcctggggatcgccgggaacgacgggctgttcccgcagtccggcacggcgggggacgtcgtcgtcggggtgctcgacaccggggtgtggccggagagcaggagctacgacgacgcgggcctcggcgaggtgccgtcgtggtggaagggggagtgcatggccgggacggggttcaactcctccgcctgcaaccggaagctcgtcggcgcgcggttcttcaaccgtgggtacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgacgacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagcctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgccgccgtcgccgacgggtgcggcgtgctctcgctctcgctcggtggcggcgccgccgactacgcgcgcgacagcgtcgcgatcggcgcgttcgcggcgatggagcagaacgtcctggtgtcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatggatcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggcaacggcaagaactacaccggcgtctccctctacgccgggaaggccctcccctccaccccgctccccatcgtctacgccgccaacgcctccaactccacggcgggcaacctctgcatgccagggacgctcacgccggagaaggtggccggcaagatcgtcgtctgcgaccgcggcgtcagcgcgcgggtccagaagggcttcgtcgtgcgcgacgccggcggcgcgggcatggtgctctccaacaccgccaccaacggcgaggagctcgtcgccgacgcgcacctcctccccgccgcgggcgtgggcgcgaaggaaggcgccgcaataaaggcgtacgtggcctccgacccgagccccacggccaccatcgtggtcgccgggacgcaggtggacgtgcgcccgtcgccggtggtcgccgcgttctcgtcgcgcgggcccaacatgctgacgccggagatcctgaagccggacatcatcgcgccgggggtgaacatcctcgcggcgtggaccggcaaggctgggccgacggggatcgccgccgacacgcgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctcatgaccaccgcctactccacctacgccggcgccggcgacgccaacccgctcctcgacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcggcaccgccgactacgtcgacttcctctgcgcgctcaactacacgtccaccatgatcgccgccgtggcgcggagcaagagctacggctgcacggagggcaaggcctactccgtgtacaacctcaactacccgtccttcgccgtggcgtactcgacggcgagcagccaggcggcggagagctccggcgcggcggcgacgacggtgacgcacaggcgcacgctcaccaacgtcggcgcggcggggacgtacaaggtgagcgcggccgccatgcctggcgtggccgtggccgtggagccgaccgagctggcgttcacgtcggccggcgagaagaagagctacacggtgagcttcacggcgaagtcgcagccgtcgggcaccgccggattcggccgcctcgtctggtcggacggcaagcacagcgtggcgagcccgatggcatttacgtggacatga</cdnaseq>

Protein Sequence

<aaseq>MMRLLLVAVAVAMAAVVVAAEERATYIVHMAKSAMPAEYGDDHG EWYGASLRSVSGAGKMLYAYDTVLHGFSARLTAREARDMAAMDGVLAVNPEARYELHT TRTPEFLGIAGNDGLFPQSGTAGDVVVGVLDTGVWPESRSYDDAGLGEVPSWWKGECM AGTGFNSSACNRKLVGARFFNRGYEAAMGPMDTTRESRSPRDDDGHGTHTSSTAAGAA VSGASLLGFASGTARGMAPRARVAVYKVCWLGGCFSSDILAGMDAAVADGCGVLSLSL GGGAADYARDSVAIGAFAAMEQNVLVSCSAGNAGPGTSTLSNVAPWITTVGAGTLDRD FPAYVSLGNGKNYTGVSLYAGKALPSTPLPIVYAANASNSTAGNLCMPGTLTPEKVAG KIVVCDRGVSARVQKGFVVRDAGGAGMVLSNTATNGEELVADAHLLPAAGVGAKEGAA IKAYVASDPSPTATIVVAGTQVDVRPSPVVAAFSSRGPNMLTPEILKPDIIAPGVNIL AAWTGKAGPTGIAADTRRVAFNIISGTSMSCPHVSGLAALLRSAHPEWSPAAVRSALM TTAYSTYAGAGDANPLLDAATGAPATPFDYGAGHVDPASAVDPGLVYDLGTADYVDFL CALNYTSTMIAAVARSKSYGCTEGKAYSVYNLNYPSFAVAYSTASSQAAESSGAAATT VTHRRTLTNVGAAGTYKVSAAAMPGVAVAVEPTELAFTSAGEKKSYTVSFTAKSQPSG TAGFGRLVWSDGKHSVASPMAFTWT</aaseq>

Gene Sequence

<dnaseqindica>47..2344#gtgctcgctagcttcgtcatctaccactgcaatttacacgacggccatgatgaggctgctgctggtggcggtggcggtggcgatggcggcggtggttgtggcggcggaggagagggcgacgtacatcgtccacatggcgaagtcggcgatgccggcggagtacggggacgaccacggcgagtggtacggcgcgtcgctgcgctccgtgtccggcgccgggaagatgctgtacgcgtacgacaccgtgctccacggcttctccgcgcggctcaccgcgcgggaggcgcgcgacatggcggccatggacggggtgctcgccgtcaacccggaggcgaggtacgagctgcacaccacgcggacgccggagttcctggggatcgccgggaacgacgggctgttcccgcagtccggcacggcgggggacgtcgtcgtcggggtgctcgacaccggggtgtggccggagagcaggagctacgacgacgcgggcctcggcgaggtgccgtcgtggtggaagggggagtgcatggccgggacggggttcaactcctccgcctgcaaccggaagctcgtcggcgcgcggttcttcaaccgtgggtacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgacgacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagcctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgccgccgtcgccgacgggtgcggcgtgctctcgctctcgctcggtggcggcgccgccgactacgcgcgcgacagcgtcgcgatcggcgcgttcgcggcgatggagcagaacgtcctggtgtcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatggatcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggcaacggcaagaactacaccggcgtctccctctacgccgggaaggccctcccctccaccccgctccccatcgtctacgccgccaacgcctccaactccacggcgggcaacctctgcatgccagggacgctcacgccggagaaggtggccggcaagatcgtcgtctgcgaccgcggcgtcagcgcgcgggtccagaagggcttcgtcgtgcgcgacgccggcggcgcgggcatggtgctctccaacaccgccaccaacggcgaggagctcgtcgccgacgcgcacctcctccccgccgcgggcgtgggcgcgaaggaaggcgccgcaataaaggcgtacgtggcctccgacccgagccccacggccaccatcgtggtcgccgggacgcaggtggacgtgcgcccgtcgccggtggtcgccgcgttctcgtcgcgcgggcccaacatgctgacgccggagatcctgaagccggacatcatcgcgccgggggtgaacatcctcgcggcgtggaccggcaaggctgggccgacggggatcgccgccgacacgcgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctcatgaccaccgcctactccacctacgccggcgccggcgacgccaacccgctcctcgacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcggcaccgccgactacgtcgacttcctctgcgcgctcaactacacgtccaccatgatcgccgccgtggcgcggagcaagagctacggctgcacggagggcaaggcctactccgtgtacaacctcaactacccgtccttcgccgtggcgtactcgacggcgagcagccaggcggcggagagctccggcgcggcggcgacgacggtgacgcacaggcgcacgctcaccaacgtcggcgcggcggggacgtacaaggtgagcgcggccgccatgcctggcgtggccgtggccgtggagccgaccgagctggcgttcacgtcggccggcgagaagaagagctacacggtgagcttcacggcgaagtcgcagccgtcgggcaccgccggattcggccgcctcgtctggtcggacggcaagcacagcgtggcgagcccgatggcatttacgtggacatgatgagcgccgccaagtcagagtggtcaccacacacacacgcacactaccacggttaaagggctggagtgtaaaaaaaatatttgggtggatttgggagggggtttaaaaatttggtggtatttcgaagtgttcataatgctattaatcttaaagtttagatggtgatttttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0605300, RefSeq:Os03g0605300