Os10g0327300

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0327300| Description = Similar to Phosphatidate cytidylyltransferase (EC 2.7.7.41)| Version = NM_001070890.1 GI:115481523 GeneID:4348326| L...")
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Gene Name

Os10g0327300

Description

Similar to Phosphatidate cytidylyltransferase (EC 2.7.7.41)

Version

NM_001070890.1 GI:115481523 GeneID:4348326

Length

5963 bp

Definition

Oryza sativa Japonica Group Os10g0327300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9317894..9323856

Sequence Coding Region

9318265..9318342,9318424..9318507,9318897..9318953,9319024..9319152,9319258..9319332
,9320393..9320440,9320975..9321131,9322335..9322476,9322861..9323012
,9323100..9323353,9323472..9323588

Expression

GEO Profiles:Os10g0327300

Genome Context

<gbrowseImage1> name=NC_008403:9317894..9323856 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9317894..9323856 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccccatgttagatccgccgctgaaagggacaatggctctggtggtgatgtcaccccgggaactccaagcccgacccatggtgcccgtgtgaggcagcggaagcgctccagcgatgctccatctgacgtgaacaaaaccaatggcgctaatttgctgctaaatgaccagaacaagtacaagtcaatgcttattcgcacgtattcttcgctctggatgatggcaggatttgtgtttttgatatacatgggacatctatacatatgggctatggttgtcgttatccaaatctttatggcgagtgagctcttcaatctgctgaggaaggccaacgaggacaggcagcttccagggttcagactacttaactggcatttcttcttcactgcgatgctttttgcgtatggccgtttccttagtcggcagcttgtcaacacggtgacttcagacaagttattgtacaagcttgtgagtggcttgatcaagtaccaaatgtttatttgctactttctttatatagcagggtttgtatggtttattctcactctaaagaaaaaggcgtacaagtatcaattcagtcaatatgcatggactcacatgatcctattgatggtatttgcacagtcatctttcactgtggccaatatatatgaaggaatgttttggttcctcctaccagcttctttgatcgctatcaacgatgttgctgcatatttcttcggcttcttctttgggaaaacacccttaattaagctctctccaaaaaaaacttgggagggctttctaggtgcatcagtgactaccatgctttctgcatttgtgcttgctaatttcatgggtcatttccagtggttaacatgccccagaaaggatttgtcgactggatggcttcattgtgatcctggctctatatttacaccagaaagttatgatttaccaggatggatcccttggcgagaagtggcaattatgcctattcagtggcatgccttagctcttggcttgtttgcttcaataatagcaccatttggagggtttttcgctagtggttttaaaagagctttcaaattcaaggattttggtgatagcatacctggccatggtggatttactgacaggatggattgtcaaatggttatggctgtgtttgcttatatctattaccaatcgtttgtgatggtacaggacttatctgttgagacaatcatggagcagatactgagaaatctcacgttcgaggagcagcatgatctttacgagcaactaggcaagttactgacgagagggaactga</cdnaseq>

Protein Sequence

<aaseq>MPHVRSAAERDNGSGGDVTPGTPSPTHGARVRQRKRSSDAPSDV NKTNGANLLLNDQNKYKSMLIRTYSSLWMMAGFVFLIYMGHLYIWAMVVVIQIFMASE LFNLLRKANEDRQLPGFRLLNWHFFFTAMLFAYGRFLSRQLVNTVTSDKLLYKLVSGL IKYQMFICYFLYIAGFVWFILTLKKKAYKYQFSQYAWTHMILLMVFAQSSFTVANIYE GMFWFLLPASLIAINDVAAYFFGFFFGKTPLIKLSPKKTWEGFLGASVTTMLSAFVLA NFMGHFQWLTCPRKDLSTGWLHCDPGSIFTPESYDLPGWIPWREVAIMPIQWHALALG LFASIIAPFGGFFASGFKRAFKFKDFGDSIPGHGGFTDRMDCQMVMAVFAYIYYQSFV MVQDLSVETIMEQILRNLTFEEQHDLYEQLGKLLTRGN</aaseq>

Gene Sequence

<dnaseqindica>5515..5592#5350..5433#4904..4960#4705..4833#4525..4599#3417..3464#2726..2882#1381..1522#845..996#504..757#269..385#gtcggtcgatctcccgtctccctcctcgcgacttcgcccgccgcgccgaccagccgccgatccccatcccggcgtgcgagcagcgccgccgccgccgccgccaccgtcctgctgcttccgccgccgccaccgtcctgctgcttccgccgcatcctctccccgccggtgagcactcctcggcacaccccctctcccatttctctctgcgcccccgtactgatagcagtttgtaaaaattatttttgggggtttcagctcaaccctccccatgccccatgttagatccgccgctgaaagggacaatggctctggtggtgatgtcaccccgggaactccaagcccgacccatggtgcccgtgtgaggcagcggaagcgctccagcgatgtgagtttttattttttattttttatttcccctgttgagatatatatctcattcttggtggccttatgtttcttgattttgtgagtggtggacaattccatgaactttttctttacaggctccatctgacgtgaacaaaaccaatggcgctaatttgctgctaaatgaccagaacaagtacaagtcaatgcttattcgcacgtattcttcgctctggatgatggcaggatttgtgtttttgatatacatgggacatctatacatatgggctatggttgtcgttatccaaatctttatggcgagtgagctcttcaatctgctgaggaaggccaacgaggacaggcagcttccagggttcagactacttaactggtaaaaatggcatggttaattctgactatgaacatttgaatgtttacatgccattacagattcttgttttcttcgtgacaattgcaggcatttcttcttcactgcgatgctttttgcgtatggccgtttccttagtcggcagcttgtcaacacggtgacttcagacaagttattgtacaagcttgtgagtggcttgatcaagtaccaaatgtttatttgctactttctttatatagcaggtaataacaacagttcattctttggccatgttatattaatgacaattagatatggttgaacactgcatggctactgtaaaccttagttttcacagttagctgattggttttgggatgaattaaagatgtttaatcaaagtttttaggaggttgtgccttgtgagtacttaaaatgcactattattttcatgtcatacctacagatgaaatgctagagttcactggtatagcggaaatagcacatttttttttcatgtcataatttcactagtatagtggaaatgcataaacttattgatatatagatgagtccattgcaccattgataaaattttaactacgtgctgccaatatatcaatttggttattacttctgtcatacagggtttgtatggtttattctcactctaaagaaaaaggcgtacaagtatcaattcagtcaatatgcatggactcacatgatcctattgatggtatttgcacagtcatctttcactgtggccaatatatatgaaggaatgttttggtaaagtctctaaccgacagaatgttctaatctttaggatcataaaaatgcgcattttcagccttagtactgtaggcttagaatatccttttcttatttcaatttgtagtcattagtggttctgctcacaaatgtatttcatgtaatgaccttcatgagatttgcagcagaatacgaatatactactagtttaaggagtttttaagactgaaggatcaaagtgatattacaatgctctaataatttaatactacctttgtcccataatataagggatactaggtttctttcgatagcctatggacgaaggacagagactatagtgttcctcattaaatgagggcatgcgaggtgtgggagggtcgttgggggtaagatgagaacaaagttaaatgaggggtgatttatgagacatgcaatactctaaaaaaatccgattgtacattgggacagaatatgaatccttcaatcacttatattatgggacgcaggagtactgaagaaacaccctgtcatgcttaaaatttagcatatttcatttgaatgcagcattgaagtaacttgtatcaagaagaagctgtgacaccatagcttacaaaatacatactattccaagctgttctatacaggcaggaatttacattgtctcgttttgtgtaaaaggttttaatctggaggtgctatggtcgtaacattgtatttatgtgctagccctaacctgtctaaattctccatgtgggactaatagcctgtgtgttgcaacgggaaaaataaatgagtttctaccttattatgtcgagtaagcacacatttagtccaagtagtgcttttatgattttgcttattgaacaagtaggtgattttgaaatttggggagagcctgcagtgaaacaggagaggactcattggatggtaggggctgactaatgggaccgatttgtcagatcggtggtggtggtgtttgtatagattgggtcctaatgtcagtggaaggtgtggtgtggcagaacgaccaccaccactactaacattttgagtaaaaataagtatagatattccatttataatatattttctgataacatgccatgaaatcattatgtgcttgcactctttcagaactacaatactgctgtttatgcagccttttggcatatccaagtgacaaatgcaaggctgacataaaaatggtgcttattttaggttcctcctaccagcttctttgatcgctatcaacgatgttgctgcatatttcttcggcttcttctttgggaaaacacccttaattaagctctctccaaaaaaaacttgggagggctttctaggtgcatcagtgactaccatgctttctgcatttgtggttagtagcacttgtctacccatatatccttcaatcgtagaggtctcagtttctcattgttggtaactaattcagtatctcgttcagaatagaattctgagtatcttttctaccatctgacaacaatcggttctgttcaaatggtttcttaaaaaaataaacaaagtctcaaacatactggttatggtttgatagatgctccaacacactatactataattgatatactgcttgtcatattagtttacaaaatcatggccagtgttggaacaaaaaagatgcaatgccatgattcatcatgctgtgcaggcatagttcttgaaacttgaaagcagaaggcatatgcacactctgtaataaattttattagtcacttaagtgtgaagtgtaatgaattactgatgctacaatattttctggcacaacttcacactgcatcttttatagtaccttttggatttttcacatctaaatatggtcgatgtgctgaaacagttcaattgataataatttattgctggttttcttttgtagcttgctaatttcatgggtcatttccagtggttaacatgccccagaaaggtaaagctcctaccttgacattgattagcctttttctcaaagagaattgcatacatactgttgtaatttgcacaggcaggatcaaaatctttcatgaatagcactactgtctcttactgttgcatttttcgtttgaaataatttcttttctgtaaccatgaccatgtgataggattgaaatatcctatgtctcaatgtatagtctaatcagaccaaaagaacacaactgagtaaccaaaattctctagctcccttccctatccttcctctttgtggtggtacatggtaatttgcattctccctgccatccaatcagttatgcatttccttcaagcacagatcaaagtgcaactgtccttaactgaacggaattgtcgcaactcaagaaccgtaggccactgaaaaaatgaaaactaataccaaagacaggcattacaaaattgtcgcagctcaagaccgagaaacttgtgcaaaacaacacaatagaacaaccaataactcagaaactgaccagtaaggtgtgagcaatgaagagatgtcattgctgtcatggcacttgttgcttgttgtgatagccctcgctgccacttgttgctgcttatgggctgcagatggtggaaggtgatgcaggtagtggcagatgagcgacttgatacaccatgctagctgtaggggttaccctggctacccatggtgggcattttaatccgagtagaatctgcatcaggttgggattggttgggcggtgtaaaatgtaatatattctgaggcattgtagtgggcatgggaggaattgggcaagatgtgggtggtggtggtgggcttggtgactcaggggagtggaagaagttagtcgatgcggaaggggaatatgtccagtatggtgacagtagcggtatttctgcaaaaaaattagctcactctttggtatggaacagaagtgcaaaattttcagttctattacttggttttaagcctctcagtaatgtagatgcaattttatatttttcgaagcaaggttggaatctacttcaatctttgttaatcctgttatctacaggatttgtcgactggatggcttcattgtgatcctggctctatatttacaccagaaagttatgatttaccaggatgggtaagaaagcattttgatgtttcttataagtgaaccggagttctcattccatgtcttctagtccttgtgccatccagcctttttgtcatcctttctattttgcagatcccttggcgagaagtggcaattatgcctattcagtggcatgccttagctcttggcttgtttgcttcaataatagcaccatttggagggtttttcgctagtggttttaaaagagctttcaaattcaaggtacgcatctattatcttttggaaaaaaaatatttcaatatcgaaatcttattcagtgtatacttttcaggattttggtgatagcatacctggccatggtggatttactgacaggatggattgtcaagtaagttactttttaagttaatttttttctgaaggctgtttataatggtgtctttcagatgagtaaacctctgtatacctgctagtgctctcgtagtatatactctcgggctctgtgcaatgctttccatgtttgatcaaatcatcattaattactctgttctgcaattttacttgcataaaaaatactaggcattattttgttcatcacttgggctctcctgcgattccaacttactgtaagattttgttcattttgtctttgttagagttaaaaacataagtaccatattattgagcttgagatcatgttcttcattcttacattacagctcacgacggctgaatggttttatctcatttgacgttctaatcattgacatcttgcagatggttatggctgtgtttgcttatatctattaccaatcgtttgtgatggtacaggacttatctgttgagacaatcatggagcaggtacttttgactcctttcgacttgcattatatcattgtgaattaaatgtaacctgacccttaatgcatttatgtaatgcagatactgagaaatctcacgttcgaggagcagcatgatctttacgagcaactaggcaagttactgacgagagggaactgatgctaacatagagacatcatgcacgaaatcaacaggactatgtgcattgttttttttacttttagatcatcatgtacagccctaacaccctaaaaacaaaagaatgataacgcttaggattgttttttttttcctcgatcgatgtaagggtatgatgttttccgagtatacaggagtttgttcttgccttctctttgtatttttctttcggttttcatctttgtggctgcatgagaaggcaaatgaaggcccagtagcaaactagcagccatgacattttttttttctttcttgtcgtcgatgggttcttgacttcttgtactttgtagaacgatattaatcccattatttccttgctttatgggtgcact</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0327300, RefSeq:Os10g0327300