Os03g0608700

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Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0608700| Description = Similar to Transposase (Fragment)| Version = NM_001057180.1 GI:115454088 GeneID:4333427| Length = 5905 bp| Definiti...")
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Gene Name

Os03g0608700

Description

Similar to Transposase (Fragment)

Version

NM_001057180.1 GI:115454088 GeneID:4333427

Length

5905 bp

Definition

Oryza sativa Japonica Group Os03g0608700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23672783..23678687

Sequence Coding Region

23672948..23673393,23673478..23673703,23673795..23673872

Expression

GEO Profiles:Os03g0608700

Genome Context

<gbrowseImage1> name=NC_008396:23672783..23678687 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23672783..23678687 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatgatcttatcaagcccccatctttggacatcgcacctaaaatagcaggcaaccacagatgggatccatacattaaggattgtattggagctattgatggcacacatgttagagcatctgtcccaaagaacatggagtcgtcttttcgtggtaggaagaatcatgctacacaaaatgtaatggcagcagtagattttgatcttcggttcacatatgtgttggctggttgggagggggctgcacatgatgttgtagttttaagagatgctttggaacgtgaaaatggtcttcatgtcccccaaggaaaattctacctagttgatgttggatacggagccaaaccgggatttttgccaccctttagaagcacccggtatcatctaaatgagtggggaaacaatccggtccaaaatgagaaggagttgttcaaccttagacactcatcccttcgtatcactgttgaacgtgcatttgggtcactgaagaggaggttcaaaattcttgatgatgccacaccatttttcccctttcagactcaagtaaacattgttgtagcttgttgtattattcataattgggtgataaatgatgatattgatgagcttgtgatgggcccaaatgagtccataattcaagacaacgatacttctacggttggccaaccaaacgaccacgcatggatggttcaatttaggcaaggacttgcagatcagatgtgggccgatcgtcaaaatcaccatggaaactaa</cdnaseq>

Protein Sequence

<aaseq>NDLIKPPSLDIAPKIAGNHRWDPYIKDCIGAIDGTHVRASVPKN MESSFRGRKNHATQNVMAAVDFDLRFTYVLAGWEGAAHDVVVLRDALERENGLHVPQG KFYLVDVGYGAKPGFLPPFRSTRYHLNEWGNNPVQNEKELFNLRHSSLRITVERAFGS LKRRFKILDDATPFFPFQTQVNIVVACCIIHNWVINDDIDELVMGPNESIIQDNDTST VGQPNDHAWMVQFRQGLADQMWADRQNHHGN</aaseq>

Gene Sequence

<dnaseqindica>5295..5740#4985..5210#4816..4893#gaggggggtgaggggatcacacctttctctcgctttctctctcgtttgcgagcggcggcgcgggcgctcgagctgacggtcggtagagacggcgccgggcatctggaggtaaggtcgacgtccccttccccttccccttcctctcctccctctggctagtgtcgcccccttccccttttttctgtgcatggcatgccgccggggccggggagggtgaagagagcggcgccgccaccgctggaggggacggatccggggtttgaagaggtcgccgtggccgggaggggattggggtcgccgtgccaggggaaacgagctcgtggcctctgcggggagtggccggtggtggggggacaagctcaccggtgtcgggtggtggtcgagctcgccgctgcaggggagtggcccagggtgggggtgggggaagaagccgccgcgccgtggggggggggggggggaggtggccgagctcgccaccggcgtgggttgtcgccgcgccgtgaggggggaggtcgtcgcgtcgtggggggtgaggtggccgagctcgctagccgccgcgccgtgggggtggggggagtcgccgcgccgtgggggggggaggtcgccacgccatgatggggggaggtcgccgcgctgggtgtggacccccgtttttataacagggatcaatcgtgtaaacagtaccatttccctggatcaagtagtctggtacacacgagttcatagctgaaataccaaatgcacatacacgagagtctagcacgaattattacatcataagcccgcaggcatagtcttagatcatcagaccgtgcggtccagaatacattccaaaagcagaagtagataaggcagcggagttaaggcagcagcacgccattgccataggcaacgaccataactaagacctactgagcgtcatcgtcttcatcactctcctggaagtaagcgtagggatcctccgaagcttcatctccggcctctgattaagtttgtatattgcaagggtgagtaccaaccgtactccgcaagccaccacagcaacaatgcacatgataggggtatttcaaaggatggctatggttcttttgcgcaaagcaagttttgtaattcttttcactagcctaagacctagcattgactgatcaaactttagtaccagtgttcacatttaaacaacgacggttctgtccaccatccattgtgatcccaaggatagcttcccgccattgagtcgtcatggttttctgaggacgtccaccttcccgcctctcaggaagtggctccaacagcataaaaatcatcatgcaataacccatcccacacaagttaagaatttagagtctagccaagtgtaatacatgtcccggtgctcaataaccgcgagcacggctattcgaatagatttggtttactcacagtgcagtggatgtacactttacccgcactccgtgactgcccaacacatgagcctcgtcccaacacatgagacgcgtcatggcaaagcctttcgataacctcgcattggcagtacccgctccatgaacttacttcctcatgcactctaggcgtccatgtttctagcaatgagaggagttctggcgctcccgagaaagagaagtctcacacacatattaaattatggttcaagttaagttctctctatcacacactcatggcagtcctaccaatggcgacaccgatgtagggcacacctctcggccctacctcaatggctatcccaccgaagcgcacctgcctcactcaggggtgaaccatctatgcagggatactgcctccgctcggctatctactccgctaggtctatacccatacgagaagtgcggttgtacgggggtcgtttcatgcttaactttatggctcagtccttaattgaccggggacggtactagccttttccagataccacccaaatcctccgtccgccccagtcgaaaacagttgttttcactttattttcctttcacaaatcatgtcatcaatttcatggcaatgtggcgctcatgtctccacatgccgcatctcaattaccttcccaaaggtaattgcccaagcatatagcatttgataaatatcagtatgcatgattctagattagcatttctaagcaattgtcataattgactagggactcatacgtaaatatggttacgaaggaataggggtacacaataatcaaggcatggcataatcacaagtaggatattcatcattgcatgcaattttatttgtaaacaaaataatttcgcaattgggatcaacatattcaaggaatagtgatgacttgccttgctcgtagtcctgcgggtcttgatcctcgctcggatccgcaactccctcggggtctaaaagtacgtgcgaagaattgatttgaattccattagaattcaaataaaatccaataaagaccaaatcgaaaagcgagcgcgagagacgaattctacatcaactacattatttgcgaaataggactatcctattttaatttactcaacctaagatattttgtgttttataagtacattcctaagatttcaacataattatttagctcttaaataaatctaaattcctaccgcgaattgattacttatagagattaccaaaaataatctataattatattaaaattttcaattctacgactataattaatctataattaaattctaattattttaatttttttctaaacttcttaatctccctcaaattcctatttattttccttttctttttctttttctttctttctttttctttctttctttttctttcttttctctccctcccggcttctttctttctctctctctctcggcttctgcccacctctctctctcggctcacggcctacccgggcggcgatggcgaccggacgcgacaggggggggggggagcggcttacgggcagcggtggcggcgcaaggcggcgatgcacggcgcggcggcttcaaggtgacggcgcggcggcacgaaagcggcggcgcggcggcatgacggcggcggcgcgtggagaaggaggagagggggggagaagatggaaggggaatgggtgtggagtggagaacgggaggggccggggttttatagggcgcgggagagggggcggccggccctcatggcgacgtgacgggtggcgcgcggtgcggtagtcggcaggcggcgatggcgatgggcgggcggcgtggcttggcacggggctcggcgcgatggcgacgggcgatgaggcggcgaggggacaggcgcgcggcgacggaacgggcgacacgacggcgggacggggctcgaggcgacggcggcacgcgcggtgcggcagcgggatggcgacggcgacggcgcagcagcagcggcgcgcggctcagagcgacgacgggacgcgacggcgacggcgcgcggcggcacggggcgcgacaggacgcgacggcgatggcgacagcgacggcgacggcgcgtggcgacgcgcgactggcggcagcagcgacatgacggacgcgacagcgacggtggcacggggctcggggcggctagacacgctcggcagagaagggggtagggctagggacctcgtcgagcacctagagtgcaatgaacaatgtattttcttatttatcccaattttagcctatttcctatataaattctattctataaatccaaatttttgcataaatgaggtttacccaatttttatgttattccaaccaatggactcacccaagattaatattacccatattttatttatataatttatttgaatgtctaattaggctaatttttattctgtcgcactggaattcaattgttactaatatggttgtgataatattttatttatttccaacctcacctaatctttactccaaattatatttcaattatttattttgctcatttaattttaggttttcttcctaatcaattgttctttattcgcgatctataaacttcgaaaccaaattccaatgaaatgagcgaataaaatcagcatgatgcaatttatttaaaaagttttttgaaggcccatatttttagagttttgattttcgttggtcgaattttcagggtgttacaccgggagggggggaggtggccgccggcatggggagtggccgccggcgtgctgtagagtttcaattaacaattattggctgtttgggatcctgtttgctcactgtttgggatttttttttgttgtttgtttgcaggttaggaggctgatctagtgagattgtttttcaacggaccgcttcctgtgttgtcaaggttaaaaccatttatttgttgaattgtttgcatactcatatatttgcatagtgaaaacctggattgtgaaatgcgttgcaaacatttgtattgtagatggatcaaaggagcaggcttttaatttttgctgctgctgcaaacatgttagtgtcgatgatggcccttattattgagtctagaaataggagagtgccaaggagagtaggaataacatatggcccattagttgaaagggatagaaagataagtgaacacctcgatgacctcatttggagaaatgatataacttgtatcaacatgcttagacttagaaaatcatctttctttcgattttgtaaactttttagagatcgtggcttgcttgaagataccatcaacgtgtgtgttgaggaacaagttgctatgtttttacatacaattggacacaatcttagaaatagggtagttggtgctactttccgtaggtcaggagaaatagttagtcgatattttaatttggtacttcatgcggttggagagttatgaaatgatcttatcaagcccccatctttggacatcgcacctaaaatagcaggcaaccacagatgggatccatacattaaggtgtgagacttatcgacgcttcttttgtccatttgctactaaattgtacatcctaaaaaatattgtcttacccatcattgaaattaattaggattgtattggagctattgatggcacacatgttagagcatctgtcccaaagaacatggagtcgtcttttcgtggtaggaagaatcatgctacacaaaatgtaatggcagcagtagattttgatcttcggttcacatatgtgttggctggttgggagggggctgcacatgatgttgtagttttaagagatgctttggaacgtgaaaatggtcttcatgtcccccaaggtaatagattaaattagtgtatcatttttatggttactaattgttaatatgtagaaatatgatgagttgccaatcacgttataggaaaattctacctagttgatgttggatacggagccaaaccgggatttttgccaccctttagaagcacccggtatcatctaaatgagtggggaaacaatccggtccaaaatgagaaggagttgttcaaccttagacactcatcccttcgtatcactgttgaacgtgcatttgggtcactgaagaggaggttcaaaattcttgatgatgccacaccatttttcccctttcagactcaagtaaacattgttgtagcttgttgtattattcataattgggtgataaatgatgatattgatgagcttgtgatgggcccaaatgagtccataattcaagacaacgatacttctacggttggccaaccaaacgaccacgcatggatggttcaatttaggcaaggacttgcagatcagatgtgggccgatcgtcaaaatcaccatggaaactaaattgtgcttgtactatttagcatttcaaaaacatgtttgcattcctttgtgtggatgtattgtcaagactaaatttatttgtagttgtactatttgtatggactacttgtatgatgaatttaaattgtacgaacatatgtattgatgtattactcttgaatgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0608700, RefSeq:Os03g0608700