Os03g0608800

From RiceWiki
Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0608800| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001057181.1 GI:115454090 GeneID:4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0608800

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001057181.1 GI:115454090 GeneID:4333428

Length

6839 bp

Definition

Oryza sativa Japonica Group Os03g0608800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23690503..23697341

Sequence Coding Region

23690682..23690811,23690921..23691031,23691443..23691570,23691643..23691926,23692601..23692670
,23692756..23692886,23696254..23696374,23696464..23696550,23696716..23696840
,23696927..23696951

Expression

GEO Profiles:Os03g0608800

Genome Context

<gbrowseImage1> name=NC_008396:23690503..23697341 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23690503..23697341 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagcgagggatgcggacaccggcgagccgccggcgaagcagagggcgatcaaccccgtcgtgcccacgaagcacccctggaatctccctgcccaaatccctctcctccactgctcctgccgcccagaggatcaagtgttggtgatacctcgagaggctaacctgcccatagacgcagaaactaggaaggtcgtggcgcgggtctcccaggcggtcgtcagcgtcgtctcctttgacgttgatggtgatcgactgtataaagcttcgggatttattatagactttgataaatctagtatgattgggacaataatttcatctgcaactgtaaacattcatgatcctgctttccctgacgttgaaaagataaatatctatctatttgatggtgtctcttacgatgctaccataatagcatgtgatcatcactggaatttgttggtcttgtctgttttattttaccctgttgtcaaaaccatgaagtttgtggaaatcaatgagagcagaactgcaagggatgcctatcatggtatagcaatgctgcagcctcactcaacccgttacaagctttgccctggggatacaattattggacttggtcgacaatctcaggagccctttgggcttcaagcgaatcgtggaatttacagtgttgaacgttgggctgatctacctaagatttgtcaagaaatgctgagagcaacatttataaacacatttactgcaataggaggcccagctataaacaaaaaggggaatgtcattggaatgcttttccatagtatgagttttactcctttcttgccgtctaacatcattttgaaatggtgggactatttcaaaacaaccgggaagtattgtcgtccaatgattagttttgtggggtacaatttgcatgttgcacggtcttcacgttgggtggatgttccaacttctttgcatgaaggcttggatgggattcttgttgagatggtatctcgggagcttttatcagcagggttacaagaaaaagaccttattattcgatgcaatgggaaacgtgttactacgaatttacagttgtttgaagtcttggtggaaaatattgcgaaaacagtggaggtaacaatagtcaaggctgagaactgcaatactcaatcaatatatcttcctgtggaggaggctatcgagaaatgcttctaccagtggccaatttcacggtactattag</cdnaseq>

Protein Sequence

<aaseq>MSARDADTGEPPAKQRAINPVVPTKHPWNLPAQIPLLHCSCRPE DQVLVIPREANLPIDAETRKVVARVSQAVVSVVSFDVDGDRLYKASGFIIDFDKSSMI GTIISSATVNIHDPAFPDVEKINIYLFDGVSYDATIIACDHHWNLLVLSVLFYPVVKT MKFVEINESRTARDAYHGIAMLQPHSTRYKLCPGDTIIGLGRQSQEPFGLQANRGIYS VERWADLPKICQEMLRATFINTFTAIGGPAINKKGNVIGMLFHSMSFTPFLPSNIILK WWDYFKTTGKYCRPMISFVGYNLHVARSSRWVDVPTSLHEGLDGILVEMVSRELLSAG LQEKDLIIRCNGKRVTTNLQLFEVLVENIAKTVEVTIVKAENCNTQSIYLPVEEAIEK CFYQWPISRYY</aaseq>

Gene Sequence

<dnaseqindica>180..309#419..529#941..1068#1141..1424#2099..2168#2254..2384#5752..5872#5962..6048#6214..6338#6425..6449#gtcttcccgtcccctcggctcggcgtcctcccaccacccgtctcgcccctccttgcgagttcgccgccgccggcgccgatatccatcccgcgttagatccatccgttcgtgtcccgcgttagatccgtccgcccctgttgcacttgattgttgttgcctgcactgcacaccgcgcggagatgtcagcgagggatgcggacaccggcgagccgccggcgaagcagagggcgatcaaccccgtcgtgcccacgaagcacccctggaatctccctgcccaaatccctctcctccactgctcctgccgcccaggtagcctgcaaaaatcccatctttttttttctttctttttccaagccttagtttcctgcttgatggtcgtcaccgggactaaaattactaatcccctgattgaaattagaggatcaagtgttggtgatacctcgagaggctaacctgcccatagacgcagaaactaggaaggtcgtggcgcgggtctcccaggcggtcgtcagcgtcgtctcctttgacggttcgttctctctctctctctctctctctctctctctcttctcgtacaaacttgtaatacaatcttaactcttaaatattacatcattattattattattccctagcctgcaatgaacttcgatttgccaaaaggatttatattttgaacttttgaccaagttggacaaaaaaagactacacatttgttaactgtcggatatgatgcttgattcttcataagaactgttaagctcttctatgttgtacacattgaaattaaactttttgacaaagattacaccttttcaacgagatacttggcctgaaaactttaaactgttaatgataagattttatgatgcaaccaagtaggtttcatttttttgcgtgttatttttcccctaatatatgaatatattatgtcttgtagttgatggtgatcgactgtataaagcttcgggatttattatagactttgataaatctagtatgattgggacaataatttcatctgcaactgtaaacattcatgatcctgctttccctgacgttgaaaaggtaacattttttttattaattcacatctgtttagttttctgttactaaactttgatacataatttattgtagataaatatctatctatttgatggtgtctcttacgatgctaccataatagcatgtgatcatcactggaatttgttggtcttgtctgttttattttaccctgttgtcaaaaccatgaagtttgtggaaatcaatgagagcagaactgcaagggatgcctatcatggtatagcaatgctgcagcctcactcaacccgttacaagctttgccctggggatacaattattggacttggtcgacaatctcaggagccctttgggcttcaagcgaatcgtggaatttacaggtactataacagctaactagtttcttatcatgatctttatgtaaattcatatttcagttaatttttacatgtcacaaaatcagtggttgtttggttgcatgccaaaccttttgtgctaagttgtggcataccacctttttgtggctaagaaatccttggcacaagttaatcagaatttgacaaggagttgtgtttataacaagttgagcattaagctaagatttagttgcctaccaaaagggtgatagcaaaccaaacactagtctaagttgatcaaacatacttgccaaaagggtgataactgtggctatggactaaacaccaacattgtagttggaataggcataatttatcttaaatatgatcttataaagaacgaatatataagaagtggtcaatacttaaaggaacatactgaattgcaaacaaaacggtaaaacaagttttggtctgttggatgaataattctccccttgtatatatcttgtaaagtaggaatggagaatataggcaagacttaaaaaacatgaattgcaaacaaaatagtaaacaaactggtgggttggaagaataattactagtattttctttatatatagtcgactactatagataaggttaaagacattatcattgaaacaatctatttttcttatccccttctttattactagtgttgaacgttgggctgatctacctaagatttgtcaagaaatgctgagagcaacatttataaacacatttgtaagtatatttttagtttcttcaaatatattagtatattatcctgttcattgcataatacggttgttttgttgtttccttatagactgcaataggaggcccagctataaacaaaaaggggaatgtcattggaatgcttttccatagtatgagttttactcctttcttgccgtctaacatcattttgaaatggtgggactatttcaaaacaaccgggtattctttatgctttaaattaatgatgatcttcttaactgatgtttgactggggtcagcggctcatacatgctggatgagatgtcgttcctgtttacttgtgtgtgcatgtgtatgagactatcaatttagatgcaggatgagtgatgcaatttaaggagtactgcataaactctgcagtgctgtgtgatggtgctacatgccatgatgccaaccttctttcctcctcttttccctttaaggaaatggctgagcatatattcagatgatttttgaactttaaaactggaaatattggactgaaaaattcgtcttcagaccaccattcatatcaaaactaaggtcctacatgcttgtttattgttttatcttatgcatgatttcctgtatatatagtttaagtttctgtacatgattaaaggcactaggcgctcctttagtatgtaattcagctaagactagtgaggcagtggcagggcctatttaaaattagtatactagttgacagaatttctgctataagcacccttcaagccaatttatctttcagtggttatgctgaaacaccaaattacctgaatgggacctgagaagactaataattgcagcatattttttttagataactagaaaaaatgcccgtgcgttgcaacgggtgaagtctattttaatcttattattgttatatggtttagttaagataaaattcactgtgggagttcgcttggatatatatttttttagaaaatcatgagctgcagttaggagtccgatcgtctcaagttagcatgcgagtttttttaaacggatttcttatatgattccttctgtattatcaaaagtgaacaatattaaaaaccgactcaaatacggatatgtatttccaaaagcaaacgaacttaaaaactgacttatacatggatgacataccaaaataccggcaaaaatattttcaatttttataatagtacatatgtatataaatctggcctctatatccatacacatagccaaaagttataattaggatatttagaccctaaacctcataactgaaaataaaagaaaagctaaaagattaagcttcagatcttcttctatgtccttgcttcaaacttgctctatccttggtgcaacaccaacccattacatcacttttttgcttagaaactttgatgtcaaaatcgctctgccaaaaatatgcaatttgctgcttgctgaaccctgttgaacaaaaaccgcactgaggcagtcttgagaagtagcttgatctacactcccttagtacatcccacccatcaattgaaacacgctgcctcccgtggagttccccaccttaggccctgttcggttacgcttggattcaatccgggctgggaatgacaagtatagtaagaaatttatgatagatacaatgagaccatgatttattccgggccgggaaccaatttactcttgatatgaacaataagagaccgggaatcaatccactagtcaagaggtgtggaactaatcccggtctcttattgtccctatcatgagtaaattggttcctggcccggaataaatcccggtctctcattgtatctatcataaatttcttactatacttgttattcccggaccggattgaatccaagcgtaaccaaacaaggccttaggcggccaaacataaggagggaggggagaagtggatctagcccacccaaccgccacctgcctgtcgttgccagatccaccagtggacgtgacaaggggaagaatgaaactagcccttcctgttgccctgccgcagccagccaccagcgacagcgaggcgggggaggctgcgggatccagcaggcttgatgaacctgctgctgccagtcccacttgccgaaagaaaggctgcacaacatagtccttgaactaggaaggcactaggcccttctccttctggaacttcttctatgcggagtacatcttccattcccttctattgctaagagcatcagagtgcaagcagacataagcgtggagcagggaaatggaagcgtcagcgcaatgaattcgcacggccagctggcaacgagccaaatcaggccaagtgccctgccattacgtgccgccgccttccatgtacacagccaccatggccttgccagcatgctgccacgctgcggcattggaccctatgcgccacgtcgccgccaggcggccactggttgactggcctcctcacagagctctgccagaaagcatccagatctggatctggagaaagggggaaaggggacaggagaaaggagaagagctgggggaagagaggcaccaccgccgttgctggcagcggtggtatgagcaattcgggggagcactggggttggggagttgtggggttgctagactgctggggtcagggagtcgtggggtcccaggagcgcctggactgaatgagtcaattgatagtcatatattattattctgtggcatatttgatactgtccctgtgatgtagatccacataccttcataaagaatgcaggtaaggcctgtggcatcaaagggttgatgacaagcatcatggggagcatcttgaccagtcctttagagagttatttgtgttggccttactgctatttactattcttatttcttggaaagcacaggaaagatgatataattgttatctgcaaatgtacttcactggaactgggagaaggcataacagtgcctaaggcataatgtttaagaaacatgaacgaactggaaaaatactatccgtgaagactactagttagtgagtacacttaagtgaaaaagaacaaagaactgcctggaaaatagcttcttcccaacaatgagtaattgagtatgtactgtcatgaaggtgctcaatggttgaaatgcaacacttctgagataagcttatgcctcatatacaaaacaatttgatgacaggaacaactaggcctttacaaaacaattcgatgacaagaacaatgatattaatgacgtaacagttcctgtattaccaataatctactcgaaagagtagaattcaagtttcttaagtatacagtgtggtgaatgttataataaagaattactttgttgttctgacgatgttcagagtagagtatctgtagccgagtcttctcagaacaatctgttaggtgaagataagtgcttagtttgaataaattgagaaactacgtatttaactggtgctaaagttgacttagccatttgccgatgttatttatggtattatgcatgttttgtgctactttatcacggggaaactcttgtaatatttgacaatttgtagtttggtagaaatttagtggcatttaattatcttgtttatcgccatgttcttttacaggaagtattgtcgtccaatgattagttttgtggggtacaatttgcatgttgcacggtcttcacgttgggtggatgttccaacttctttgcatgaaggcttggatgggattcttgttgagatggtataaatgcactgtctcaataaacaatataagtgctgcatttcatagttattctgtaattgtcatctttggtactaattttcaaccaggtatctcgggagcttttatcagcagggttacaagaaaaagaccttattattcgatgcaatgggaaacgtgttactacgaatttacaggtaccaaagtatctttattattatagagcaacttattggtgtgacatttaccactcatttatctcttggcgtttactagttttgttgaaatgtgaccagatatgttatttctttcaccttgcagtctgcactcaagccccttttttttttctgtcttggctttagttgtttgaagtcttggtggaaaatattgcgaaaacagtggaggtaacaatagtcaaggctgagaactgcaatactcaatcaatatatcttcctgtggaggaggctatcgagaaatgcttctaccagtagtcactcctaccccacgcccaaaaaagattatttcaatttatttttcgtgttcttcctgtactcactattctaactgtatcaggtggccaatttcacggtactattaggatggacggctctaaggacctgtttgtcacagctccagtccagccggacagtccacctaaaatgggagtggagctaggtggggcgctctcacaaaatgaactagagaggtggaggagctgaatttagactactccacaactctacttcaaactcaactcctgaactacttcaaactcaactcctgaagttaaatttaggagttgaagctctaccaaatagacctgtcactactgtagcggattcgactatgatttagggctagtggacatttcatgtttgcggaattattgtttaatagcatattaatagtccatgtgttgtattgggattttaattatcattaacatgatattaccatttttaattattgtacatatttgttattactc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0608800, RefSeq:Os03g0608800