Os03g0609500

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Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0609500| Description = Similar to LOB domain protein 39| Version = NM_001057183.1 GI:115454094 GeneID:4333430| Length = 2518 bp| Definitio...")
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Gene Name

Os03g0609500

Description

Similar to LOB domain protein 39

Version

NM_001057183.1 GI:115454094 GeneID:4333430

Length

2518 bp

Definition

Oryza sativa Japonica Group Os03g0609500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23737375..23739892

Sequence Coding Region

23737375..23737889,23739709..23739892

Expression

GEO Profiles:Os03g0609500

Genome Context

<gbrowseImage1> name=NC_008396:23737375..23739892 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23737375..23739892 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctgcaacgggtgccgcgtgctgcggaaggggtgcagcgacgcgtgcgtgctgcggccgagcatcgagtggatcgacggcgcgcagccgcaggccaacgccaccgtcttcgtcgccaagttcttcggccgcgccggcctcgtcgcctccctcgccgccgtccctctccaccatcgtccagcgctgttccggtcgcttctgtacgaggcgtgcgggcggacgataaacccggtgagcggcgccatcgggctcatgtggacgggcaactgggacctctgccaggccgccgccgacgccgtcctccgcggcgactccctccgcgccctctcggccgtgccagccgccttcaccgaccgcgacatggccggcctctacggcaacgtcggcgccgccgccgggacctcctcctcctcgcccgacaacgacaactcctccgcctccgccgcgccccggaggaagcggcccaggaataacggcgccggcgccggcgtcggtcagcagcagctgccgcacgcggtggctgcggtgctccagtcctgcgagctggacctctgcctcacgcccgtctcaccgccggccgtgcagctggtgggtgggggcggcggcgcgtcggacgagcactcgacgacgacgtgcgaggaagccagcgacggggatggcgccggggcgcccacgctgctgaacctcttcagctga</cdnaseq>

Protein Sequence

<aaseq>MSCNGCRVLRKGCSDACVLRPSIEWIDGAQPQANATVFVAKFFG RAGLVASLAAVPLHHRPALFRSLLYEACGRTINPVSGAIGLMWTGNWDLCQAAADAVL RGDSLRALSAVPAAFTDRDMAGLYGNVGAAAGTSSSSPDNDNSSASAAPRRKRPRNNG AGAGVGQQQLPHAVAAVLQSCELDLCLTPVSPPAVQLVGGGGGASDEHSTTTCEEASD GDGAGAPTLLNLFS</aaseq>

Gene Sequence

<dnaseqindica>2004..2518#1..184#atgagctgcaacgggtgccgcgtgctgcggaaggggtgcagcgacgcgtgcgtgctgcggccgagcatcgagtggatcgacggcgcgcagccgcaggccaacgccaccgtcttcgtcgccaagttcttcggccgcgccggcctcgtcgcctccctcgccgccgtccctctccaccatcgtccaggtatatacccttcgatcgattccatcgctcctcatctccccttaattaaggcctaccttaactcttaatttcttgcctccatttcgagctaattattgtgtccgcaaacttaactaggtacagtagtggtaaattacgaggttacaaatctaatgttcgttgtgtactttgtaatttaagcaattctcagatatcggtttctgaaaacagtccagacaatcaatcacagttaagctgtcaattactgtgtttggaaatacagtgcaagttctcggtttactagctctaattaagtcgttgcttataattagcttagaggccgggcttgttcatcggtcacaattagtacacctctatcatgtagtagttgcagtaaattactccacttgttaaggaaaaaggctagaaattaactagaaaaaaatattttctcaggttttatctagatgaacaattagtgcagaaagacttgtgactactagagctgacctaacaccaaagatggagtcgtgataccagtacttatatatatatatatatatatatatatatatatatatatatatatatatatatagtaaatttgtttggtgctccatggtgcccgggcaccattgttgaaattgagtatatacccaattcaaatgagcatgaaactttttcaattatttaggtattaatattaactactttactaactagttgaaagcaagtttgaactgaatttgaacttgtttttgttagattttgattctaggtatatagcatccatacatataattagttaggtatgtaatcatggattgtgaaataaagttaaatttgagttgttttgttgataggtataggtatgaattgaattcttataactgaattcttataactaggtatatactcacaatttgaaaattttaaaaaatttgagtgattttgtgcatttgaaaccatggtgcccgggcaccatggtgccccatatgagtgtcctatatatatatatatatatatatatatatatatatttggtgttcccttttaatttggatgttatgcggccttccgacgcctccaggggacaatccgaatagagaatctttttcagccatgtccccaactgtacttcaccaaactaaactcctcttcagagactcctagtgccaagagatatgttagtttagttgacagtttctttcttttgtttgtttagagcccaattggcgtagtttgctttcggcttttgtcatcaggtcaattggtatcttttgatcctcacactgaaatgaacctagattattactctgcattaacacaataaacaaacacagaaacatatttattaatattatcggtatttctgaagttatttttagaattagagatttgctctggtccaataaaaagtatctcgaggtaccggtacttacacagtactagattgcttccaatggttggttctaggccaatgaatttttgttggatcctgcctagctaaacaatttactaccgtgaggtaccggtatctcgaggaacttttttttgaaccagagcaaatctcttagaagtaggtaaatgaatttttgccaaatacatcaaaattgaactgaattaattcctgtgaactgatctctgaataaattgtttgtagacaatttatgatgtccagataaatcatgaggttgaaattggtgaagtaggaaccacttgatagattaggcatatattaattcctgattgaaacttgggtggttaatctctgaatttaaatttaaatggatgaatatattgacgtgtgaagttgtgttgcttggatggatggatgcagcgctgttccggtcgcttctgtacgaggcgtgcgggcggacgataaacccggtgagcggcgccatcgggctcatgtggacgggcaactgggacctctgccaggccgccgccgacgccgtcctccgcggcgactccctccgcgccctctcggccgtgccagccgccttcaccgaccgcgacatggccggcctctacggcaacgtcggcgccgccgccgggacctcctcctcctcgcccgacaacgacaactcctccgcctccgccgcgccccggaggaagcggcccaggaataacggcgccggcgccggcgtcggtcagcagcagctgccgcacgcggtggctgcggtgctccagtcctgcgagctggacctctgcctcacgcccgtctcaccgccggccgtgcagctggtgggtgggggcggcggcgcgtcggacgagcactcgacgacgacgtgcgaggaagccagcgacggggatggcgccggggcgcccacgctgctgaacctcttcagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0609500, RefSeq:Os03g0609500