Os10g0327800

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0327800| Description = Conserved hypothetical protein| Version = NM_001070891.1 GI:115481525 GeneID:4348327| Length = 6304 bp| Definition ...")
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Gene Name

Os10g0327800

Description

Conserved hypothetical protein

Version

NM_001070891.1 GI:115481525 GeneID:4348327

Length

6304 bp

Definition

Oryza sativa Japonica Group Os10g0327800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9355719..9362022

Sequence Coding Region

9355814..9356052,9356680..9356909,9358195..9358430,9361312..9361875

Expression

GEO Profiles:Os10g0327800

Genome Context

<gbrowseImage1> name=NC_008403:9355719..9362022 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9355719..9362022 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaagcctctcccgctccaccctcctcggcctcgtccgccgccttcgcttgtcctcccctccatcccccgcgccccaaccgcgccgcctcctcttgaccgcctccccgccgccgccgccgccgccgacgacgactgtctgttgttctcgtccggcggccgcgccagggcgagatgctcggacgatggcggtggccctggcggcttctcccgatcgatccatgggccgtgaatcccgatttcgtcatggatggaggagtctgaccagcagctctgaggaaaaaggagcgctgaaagatgtaccggccgctgccatgctgaagaatagaaatgataacgagaagaaacggagtaggaggaggaagcctggaataaccatccttaagaatagcggacaccgtgatggttctatatttaagggcaaccgtggctggaaaatagacttccgtattgcaaaccctgatgagacccagttcgaggccatgatgctgtcagatcctggagattgcaagccagatgaaatagcatgtgttatgcaccaaccatgtcccatgctgcaaattttttcattgaaattggctaaaacttccattgatcgttttccagttgagttgtatggatacatagcagtgcgggatctcatggatccactgcgcaattatgttgtccgtcgcagcagggatgataccattgccgtgaagccgggttctctcatcggaatgactggacccaagcgtggcataaaattctgttcatctgccctaattgagtatgatatgagaatcaagacaggagaacaagaagaggatgatatacagctgattgacggtgtattaggcatctttgatgatctaagcaagccatcgtgtaaaccgttcagaagtcgcattgatggagttggtggggcagttgacatcaccgttggactgcttcccagtgcagtggaggccatatttgaagtttccatatcagaagtccaaagttgtttcgatctcaccgtgtgttcttatgctggtgggttaagccaacaatttaagatctttcagggcaccattggtgagtcgtgtggcttgagaaggtccgtggttgctgtaatgttggatggtatgttgcacctgaggttcatagctcggagaaaaggctctaaacgggatcatgaaattgcttgttcaatcagagcaaagaaacatggaagctccacccaccagttaaatactgagctcgcttccttcttggtcaaggtgaattggtcgacattgcctatgtaa</cdnaseq>

Protein Sequence

<aaseq>MQSLSRSTLLGLVRRLRLSSPPSPAPQPRRLLLTASPPPPPPPT TTVCCSRPAAAPGRDARTMAVALAASPDRSMGRESRFRHGWRSLTSSSEEKGALKDVP AAAMLKNRNDNEKKRSRRRKPGITILKNSGHRDGSIFKGNRGWKIDFRIANPDETQFE AMMLSDPGDCKPDEIACVMHQPCPMLQIFSLKLAKTSIDRFPVELYGYIAVRDLMDPL RNYVVRRSRDDTIAVKPGSLIGMTGPKRGIKFCSSALIEYDMRIKTGEQEEDDIQLID GVLGIFDDLSKPSCKPFRSRIDGVGGAVDITVGLLPSAVEAIFEVSISEVQSCFDLTV CSYAGGLSQQFKIFQGTIGESCGLRRSVVAVMLDGMLHLRFIARRKGSKRDHEIACSI RAKKHGSSTHQLNTELASFLVKVNWSTLPM</aaseq>

Gene Sequence

<dnaseqindica>96..334#962..1191#2477..2712#5594..6157#ccttccccagacactgcactactgcagccccccgaccccgattgatcgcacgtatcgccggcggcattggccaagaactagcagccgcgcagcggatgcaaagcctctcccgctccaccctcctcggcctcgtccgccgccttcgcttgtcctcccctccatcccccgcgccccaaccgcgccgcctcctcttgaccgcctccccgccgccgccgccgccgccgacgacgactgtctgttgttctcgtccggcggccgcgccagggcgagatgctcggacgatggcggtggccctggcggcttctcccgatcgatccatgggccgtgaatcccggtctggtttcttgtcctgttatgagtgagatagatctgcattttttttcttctgttggtcggtttcttcttctccgtgaatggatgtgcgagggccatgcgcgtcgtagtgggttttggattgggttcgtacgtagcgtacttctaatttggaggattttgttttaatcatgatccataaggctgttcgcattgttctgattttttggaggcaaattaagaaaatgatttaattccacacatgatcctaacaagaaggaactgaaattaaaccaattcaggtaaccaaatcatgatgtcgagttcaaatttaggtaaatgactgcgttttcatttgttgtatcttactccctccgtccttgtcaaactttgatcaagtttattgaaaaatttagcaacatctaacataccaaatagtttcattaaatctaacattgaatatattttgataatgtgtttctttgtgttggaaattctactatatttttctataaatttggtcaaacttaaacaagtttgacaagaaaaaaaaagtctaaacgacttataatatgaaatggagggaacagtatatatgatttggttgctttagactgaagagttagttacttctgctctctgttaatagatttcgtcatggatggaggagtctgaccagcagctctgaggaaaaaggagcgctgaaagatgtaccggccgctgccatgctgaagaatagaaatgataacgagaagaaacggagtaggaggaggaagcctggaataaccatccttaagaatagcggacaccgtgatggttctatatttaagggcaaccgtggctggaaaatagacttccgtattgcaaaccctgatgagagtaagtagtttaaatttatgtattttctttttgcgctattcatattttggtatacttccttattaagagttaaactatgcactatgatttagtgccgttctgaagggagtaggctacagtatgtagaaaatcacatgtgcacaaaaatctcagtctgtgttcagctaggtgctagttggtcgatgacccactgactagggactagtcctactagttggtgactagttggcagttcaaatatgttgaacaataaaccacagaagcagctaccttatttgacaacatatcttcaaactattgagtacttagatttgataaacggtgcgatgtgaaggcgagagagggtgtggcggcacttggctgctccatacaggaccaaaggagggaataaagggaccgtcttaaccctaggaaccatccgccccttcttatcctgcttgtttggcccaaaattttagcatgtgctacttttttatttcctagttggcccattgaactgtctagtcactgaatcatactgaccgactaatcggtcggtctgactgattcactgaatcaaggcgggttggtttcgactactaactagtcaccgattaaccagcctagttggttgactaggtgaacacttgttatgggcatgggcctggcccatgcaacagtttaggcatgataaattaggaataagtcacataaatataggagattacctagttaggaaagagatgaggtttattggattggattggtttatataatactagagactagttccttaagtgagtctgtcctccctatatataaagggaccccatgtattctattatcaatcaatcaatgaatctctaaagttagccctaagcctcagagcttcttttagctcaacagggagaagcccttcctctgctattagagggcgagcacgctatccccgggtcttaggacccttatcctagccaatccataacaacactgatatcagttaatgtcgtgtattcacatgctgaaaatttttatgtccctcacgtttaacacatgtcatcagctcatcagtcataggagaggcacagctgccatagcagcccaaagatggcttagtagttagtacttcagtgcagagttttgtgaaacattttgcctttcatacatgggattaagtcagttttttcactaggcaatggctttatttatttatgaacataagtacgggaaagtgtaaactactgttatttcaatatttctcttgttctgattgcttatttaactatgacttaaatctctggtgaagcccagttcgaggccatgatgctgtcagatcctggagattgcaagccagatgaaatagcatgtgttatgcaccaaccatgtcccatgctgcaaattttttcattgaaattggctaaaacttccattgatcgttttccagttgagttgtatggatacatagcagtgcgggatctcatggatccactgcgcaattatgttgtccgtcgcagcagggatgataccattgccgtgaagccggtaagcatctgcacttatctgcaattatgttaatgtacttcattcattttacaatatgtgccaaaaactaacaaggttataaataaaatgaaacatgcatatcatgacatattacaacatttaatctcttttacatccttatgatttgaacagacagtggaatactggcaacacttttccctttccatttttaaggctggatacaattttgcaacattgtattaagtatgatattggactcagtctgcactcttgatttactaactaattagacagaaaatccatatgtggttgagcagtggatattcatattacataaaattttatggttttacctagttttgttttggtctactaagttataactgaaaaaactccactatagactatagtagtgcagcgattatatcatggaaccagttaaggtgctagttgttttaacaaaagaaaatatctatcggagtaaggacaatagaaaaacctgtcatttcctctctactctagcggtcgtttggagaagatagggagaagaaatcccttgttttcctcgcgtacacctcccgaactgttaaatgatgtttttttttgtaaaaaaattctatagaaaagttgttttaaaaaaatcacattaatattttttcaagtttgaaataattaatactcaattaatgatgtgctaagggcccaccttattttgcgtatcttctcaatcttctctttccccctcctctcaaacacagtatatgataaatgaatttgaatcatcacaatgtctttcctcttgtaccagatatattgcacatacagttgagtaatagggatttgtaataaaaaaaatgaataaattatcggggagaatatgtaattactttcacacccttcgacacataataatgattgataatgccgtgttgttggcattattatctgataatgtatgagccatccaggctgatcctggcctgaatgaataggtgcaaggaaagttgtttggttgacgtatcacttgagacaggattaagtgagatgttgtttggttagatgcatgagtggtgagtttggttacctctttttgttgggggtgagtttacccccttttcaatctataactggtttttaacatgataaaatgcagtatactagtgaaatctattgcatagttaacacgtaatcagttttaaaaaaattaactagttgcccttcggtgtataataaatgaaccgtagtatctttcagtgctcaatacaggatgcatatctttaaccgatttgaggaaaaagaggaaaaaaagaaaaacaacaaaaattcttagcgcgtggatgtcgtcgtccccaacacttcaattgccggtagaggggccctgcggcgctggtctccgctcccctccactgccggtgccggtcactgttccccttcccctcggccatggcaccaatctctgctccccttcccctcctctgccatgctttttgtcgaacccctttcccaccctccacttgcggccatcggtgcttagatccacagcaggcagcaatccgatggctgtagaagggagtgaagatggcgccatggaagatggccagccatggaagatggcgccagcgatgagaggaggaagacggtggtggtgacagcggtggtgccgctccagtttccagatccggtgtcattcatcgagctcatcgccccttcaacataagtgcagtgtcctccgacgagctccttcgtcctccccagccggcaaaccttctggatctgctcatgcatcctcgaggcaaagaaggagagggcctctagaggagaggagagaggaagaggagaagcatgctgcaaatggaaccggagaggtgagcggattgctcgtgggtcacgcactcgcacccgcgcctgcatccgcacagccaggcttaggagtgaagctcactcctcacgtttctgttgggcctggctcgagagtgtattttgcatgtgtggaaccaggctgagatctccgtgcaggcaaccaaatagctggaatttgcatgtgcgggtgcgagccaagtcccatgcagggaaccaaacacacccagagtgatccatctaaatgctgctaggtgtctaacaggatacattgaacaatgctcgaatttcctgtcagatttggtagttctgttctaaagcaatcatttagtacagggatcttgtccaagcctttctcatggcaagtatagtcatccagcaaattgaaagcaaaagtactgatccttaaaggaagtcagcaccaaaattgagaagcataataaaaccagaattggttgttatgaaaatcagaaaattatggaaaacagaacgcaggccttttatttttccggcctgaaggctacaaattattctcgtaaggaaaatttgaatctgagaattgaattcaccagcaactagtgcaatattgaacacatgttttatgaggattacaatagggagctcagcagaaatactgcacttcttcttcacactttctaaatatatatgtactgtagtaacaggtggaagaacaagaaaacaattttcgttgcaaaaaaaatcttatctgagtcaagtaaggtaaaaaatccttatctagatatacatctgtgtagaaaaatcgaagtgatttttgagtcatacatttaatagacaaccaataagaatgaataggtagataaaccatggagacatttacatggccccagagacttgtggtactcaacaggtcctcactcacataacaaagttctgagcccatagagttggatattcctcttaactgcatacctttataattgaaacatcataaaggaagtatttagcttttggtatttcttactttgctatgaagagctactaaaaatttgtaattatgtagggttctctcatcggaatgactggacccaagcgtggcataaaattctgttcatctgccctaattgagtatgatatgagaatcaagacaggagaacaagaagaggatgatatacagctgattgacggtgtattaggcatctttgatgatctaagcaagccatcgtgtaaaccgttcagaagtcgcattgatggagttggtggggcagttgacatcaccgttggactgcttcccagtgcagtggaggccatatttgaagtttccatatcagaagtccaaagttgtttcgatctcaccgtgtgttcttatgctggtgggttaagccaacaatttaagatctttcagggcaccattggtgagtcgtgtggcttgagaaggtccgtggttgctgtaatgttggatggtatgttgcacctgaggttcatagctcggagaaaaggctctaaacgggatcatgaaattgcttgttcaatcagagcaaagaaacatggaagctccacccaccagttaaatactgagctcgcttccttcttggtcaaggtgaattggtcgacattgcctatgtaaattccttatcttttctgttattccttaaatttttgttagaagagataacctgcttcatcccgttaattccttaaatttttgttagaagagataacctgcttcatcccgttaatgcatctccatcaatggtggatgtttgaaatgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0327800, RefSeq:Os10g0327800