Os03g0617800

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Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0617800| Description = Similar to INDEHISCENT protein| Version = NM_001057202.1 GI:115454132 GeneID:4333457| Length = 1397 bp| Definition ...")
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Gene Name

Os03g0617800

Description

Similar to INDEHISCENT protein

Version

NM_001057202.1 GI:115454132 GeneID:4333457

Length

1397 bp

Definition

Oryza sativa Japonica Group Os03g0617800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24193513..24194909

Sequence Coding Region

24193513..24193602,24193729..24193794,24193930..24193995,24194081..24194305,24194424..24194909

Expression

GEO Profiles:Os03g0617800

Genome Context

<gbrowseImage1> name=NC_008396:24193513..24194909 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24193513..24194909 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccggaggggtgatcgcggaggcggggtggagctcgctcgacatgtcgtcgcaggccgaggagtcggagatgatggcgcagctgcttggaacctgcttcccctccaatggcgaggatgatcatcaccaagagcttccttggtcggttgacacccccagtgcctactacctccattgcaatggaggtagctcaagtgcatacagctctaccactagcagcaacagtgctagtggtagcttcactctcattgcaccaagatctgagtatgaggggtactatgtgagtgactctaatgaggcggccctcgggatcagcatccaggagcaaggtgcagctcagttcatggatgccattctcaaccggaacggcgatccgggcttcgatgatctcgctgactcgagcgttaatctgctggattccatcggcgcttctaacaagagaaagattcaggagcaaggcaggctagatgaccaaacgaaaagtaggaaatctgcgaagaaggctggctcgaagcggggaaagaaggcggcgcaatgtgaaggtgaagatggcagcattgctgtcaccaacaggcaaagcttgagctgctgcacctctgaaaatgattcgattggttctcaagaatctcctgttgctgctaagtcgaatggcaaggctcaatctggccatcggtcagcaaccgatccccagagcctctatgcaaggaaaagaagagagaggatcaatgagaggctcaagattctgcagaaccttgtaccaaatggaaccaaagtagatatcagcactatgcttgaagaggcaatgcattacgtgaagttcttgcagcttcaaatcaagctcctcagctctgatgaaatgtggatgtacgcaccgattgcttacaacgggatgaacatcgggatcgatttgaacctctctcagcattga</cdnaseq>

Protein Sequence

<aaseq>MESGGVIAEAGWSSLDMSSQAEESEMMAQLLGTCFPSNGEDDHH QELPWSVDTPSAYYLHCNGGSSSAYSSTTSSNSASGSFTLIAPRSEYEGYYVSDSNEA ALGISIQEQGAAQFMDAILNRNGDPGFDDLADSSVNLLDSIGASNKRKIQEQGRLDDQ TKSRKSAKKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSENDSIGSQESPVAAKSN GKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFL QLQIKLLSSDEMWMYAPIAYNGMNIGIDLNLSQH</aaseq>

Gene Sequence

<dnaseqindica>1308..1397#1116..1181#915..980#605..829#1..486#atggagtccggaggggtgatcgcggaggcggggtggagctcgctcgacatgtcgtcgcaggccgaggagtcggagatgatggcgcagctgcttggaacctgcttcccctccaatggcgaggatgatcatcaccaagagcttccttggtcggttgacacccccagtgcctactacctccattgcaatggaggtagctcaagtgcatacagctctaccactagcagcaacagtgctagtggtagcttcactctcattgcaccaagatctgagtatgaggggtactatgtgagtgactctaatgaggcggccctcgggatcagcatccaggagcaaggtgcagctcagttcatggatgccattctcaaccggaacggcgatccgggcttcgatgatctcgctgactcgagcgttaatctgctggattccatcggcgcttctaacaagagaaagattcaggagcaaggcaggctagatgaccaaacgaaagtgagttaacctgatgattttttatcatttttgcgataacagtgtattaaggctgctgtttaaattgctggtgtgcagaatttgcatgctgattttgattgaaatggatataatgcagagtaggaaatctgcgaagaaggctggctcgaagcggggaaagaaggcggcgcaatgtgaaggtgaagatggcagcattgctgtcaccaacaggcaaagcttgagctgctgcacctctgaaaatgattcgattggttctcaagaatctcctgttgctgctaagtcgaatggcaaggctcaatctggccatcggtcagcaaccgatccccagagcctctatgcaagggtactagagatgatcttctgaattcactgtctaaaaacgttacagattggcaatctcgctaatgctcttcgtttattggatgcagaaaagaagagagaggatcaatgagaggctcaagattctgcagaaccttgtaccaaatggaaccaaagtaagattctgagaaaaatatcatcagtatttagtactaactgtagatcgttctttttttttaaaaaaagtagtaactgtagatcgtaaaagaatgccgacaactcaaacagtatggatctcattctcctttcaggtagatatcagcactatgcttgaagaggcaatgcattacgtgaagttcttgcagcttcaaatcaaggtgaggcttttcgcagcccatatgacaacttcagattattccctctgctcttgtcaaaattgctcagcaagttgcatttttttttctggtgaaaaaaaaaaactcaagttgttggttttcttgcagctcctcagctctgatgaaatgtggatgtacgcaccgattgcttacaacgggatgaacatcgggatcgatttgaacctctctcagcattga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0617800, RefSeq:Os03g0617800