Os10g0329300

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0329300| Description = Similar to Mevalonate kinase (EC 2.7.1.36) (MK)| Version = NM_001070895.1 GI:115481533 GeneID:4348331| Length = 5084...")
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Gene Name

Os10g0329300

Description

Similar to Mevalonate kinase (EC 2.7.1.36) (MK)

Version

NM_001070895.1 GI:115481533 GeneID:4348331

Length

5084 bp

Definition

Oryza sativa Japonica Group Os10g0329300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9453603..9458686

Sequence Coding Region

9456282..9456667,9456763..9457028,9457335..9457748,9458306..9458445

Expression

GEO Profiles:Os10g0329300

Genome Context

<gbrowseImage1> name=NC_008403:9453603..9458686 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9453603..9458686 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtttgcgccgcccgcgccccaggcaagattatccttgccggcgagcacgccgtcgtccatggctcagccgccgtcgccgccgccatcgacctctacacgcgctgctccctctgcctcatgcccctcgctgacgacgaggcggccgccacgttggagctggacctcaaggatcctggcctcaccttctcgtggccgtgcgggcgcctccgcgaggtgctgctgacagatgaggcggcgggggcacgggaggcgaggccatgctccccggaccggctggcctccattgccaggctcttggaggagcacgagatccctgaggccaagatctggctctccgccggtctctctgccttcctcttcctctacacctccatattggggtgtagacccgggaaggtgacggtgagctcggacctgcccatggggtcggggcttgggtcatcggccgccttctgcgtgtcgatgtcgggggtgttgctgacagctgccggcgtggttactgcagtcggcggcatcagcggcgagggcatggggtgggagttggtcgggaaggatgatcttgagctagttaaccggtgggctttccagggggagaagattatccatgggaagccttctggcatcgacaatgctgtcagcactttcggaagcatgatcaaattcaagaaaggggaattgacaaaccttaaatctagcaacccagtgaaaatgcttattacggatacaagagttggtaggaacacaaaggctctggttgctggtgtctctgaaagagcctccaggcattcagatgctatggcttctgtattcaacgcagtgaactccattagtgaagaggtgtcaagcattgttgagttagcagctaatgatgagatagctatcacctcaaaggaggaaaagctggcggaactcatggagatgaaccaaggtttgcttcagtgcatgggtgttagccattcttcaatagaaactgtactgcggacaacattgaaattcaacttggtctccaagttaacaggagctggaggtggtggttgtgttttgaccctgataccaactatgctatccaacttagttctggagaaagtcattgcagagctggagtcgcatagttttcgctgctttaaagttgaggttggtggacagggtcttcaagtttgccaaggaggctgctcctattttaatggagatgttgtataa</cdnaseq>

Protein Sequence

<aaseq>MEVCAARAPGKIILAGEHAVVHGSAAVAAAIDLYTRCSLCLMPL ADDEAAATLELDLKDPGLTFSWPCGRLREVLLTDEAAGAREARPCSPDRLASIARLLE EHEIPEAKIWLSAGLSAFLFLYTSILGCRPGKVTVSSDLPMGSGLGSSAAFCVSMSGV LLTAAGVVTAVGGISGEGMGWELVGKDDLELVNRWAFQGEKIIHGKPSGIDNAVSTFG SMIKFKKGELTNLKSSNPVKMLITDTRVGRNTKALVAGVSERASRHSDAMASVFNAVN SISEEVSSIVELAANDEIAITSKEEKLAELMEMNQGLLQCMGVSHSSIETVLRTTLKF NLVSKLTGAGGGGCVLTLIPTMLSNLVLEKVIAELESHSFRCFKVEVGGQGLQVCQGG CSYFNGDVV</aaseq>

Gene Sequence

<dnaseqindica>2680..3065#3161..3426#3733..4146#4704..4843#ctccaatcccctcccgctcgcacaatcgacgcccacttccgccgatccggccgccgtctcccgcactgcccccacctcaaccgccgctgccgccgatcctgcggtctcgcctcgcctcgccgccctccgcctccgcctccctcccgcccctcgccgtcttccgcctatccccgccgtcgcggccccctcacttccccacctccaccgccgctgcgccgatccatcatcctgctgcctcgatccatcatagctgcgcgcgctccgccgtcgcgcctccaccttcccctcgaaagcaactcgccttctccactggtggcctccgcctaaccccgtcgccgccactagtggatcgcgaccgtgccgacaggtgattggatttttttcttttttcaatgataagttcgactgatttgatgaatcttggattgaaggttggagaggacagcaaatacctctcgcccgatgtcaatcgcggcaacttcatttctttaatctccaatatggacttgggaccaatgccctaagcttcactattaaatttggctgcgctaatgaattcatatgaattctgctttttttttttgtggggtgaaatgatatgttattttattttgtggagaacttgcttcacaatctgctgctaactcaacctgatcaaatctgttttaaaatggagctgtcaatgtgcagaaattgaactaaattgcagtggcatatattctagcttgctgaaagagttatcaactactgcaatgttgaatactgtcagtttaagcagcaccatggtctgtattgtgtgttgactacctcaatcacctaaccgacaaccacaaactcactgatatgaataaatgaatgcgagcaaattttttatctggttctgaacttcagcaatcgtatgctgtcctcaattggctttcagtctctgagtttcgcaagtttgaccttcggcattctgttttacatttgtttgtttgtgcagaggggttcagcttcaagaaatagatcccactgatctttaatgtagtttttcttttcctataatatgctgcagatcacacacatttcagagttagtctccacaccaacgttgtcgtcactatcaggtgatttttaggtcgcttcagctatgtgcattttatttggtgatggtatagaggccacaattcgaccacatatagtggcctgaccctgacgcgtgaattcatatcaatatttattacaccgaactcgtttctttttcttccagcgtgggtaactttttacagcttgtatttattctgaaagtaaattgcttggaagcaaacatatgcataagagtctttttttacataataatgcagcatttgatggacatttaacatgaaactttgtaaatctagacacttgtgcagctgaaatagcatatatattgattggctctttcatatccataaagaatgaatgatttgttcgcttcagctatttgcatattatttgtttcaatcttatactactaattatagtttgaaacaataaaccatgctatagatgcatattcattcagaatttttcaacatcaattatttgccccatagaccatacagatagtcaccatcaacaattttctccacataaaaaagaaaccttaactatctgtcaccaaaagattgtaattcaggatttgcattctgttcatcacacagagtttatttagcgcaaaatgtttttccctacatgtcaatcccagaatataatcgttttcagattatcgcagtgtgaactgtttgatgtaacagattgtaggcaaccaaccaaccagtccaggggccccaggagtccaggcttgctttttgaaaacccttacctactccacaagcaattatgagaattgagatgttggaaaaactctgtgaatagtgtttgaacttttcgaaaaggttaaaaattgatgttatcatttatatactgctattcttcacatttgcattatttcctcaaagttttatttctctgagttcctttttggtatcccttatttctgcctagaaattaaattgacattcttcttctgtccactatgtattatggatgctttctggtgcatatactaaacagaaacacaataatggttttttttactaatcaagggtgataagaaggtactatatatattcaagaacatgcattttattatatcacagaagaaggggtgatccttgatgatataggcccttggataggctggtgactgaaggaacagctgttaattgtgtttcatgatataggcccctggatatttcagtttctggctctgtagaggggtttaaatttcataaatagattcaactgatgtataatgtgatctcaatcttttaagtactgacacagatattcaaaagctgaagcacaaaaacacgaaagtgtagccttcattatgggtggtgtggctgatacttgccaatagcatatatagcgataatcatccgtgtagtttgcattgtgcaggccataaaacccgagggttcaaagtgagtcagaagaactgtatccaggggattaaaagcagcggcctttgggttgttgcttggagtaccaaacttcggtaatatcgaattccaatttaataagcttatagcatacattagcattgatcaattcgattcgacatgagagcaggaagggttcgtcagatcactaatggaggtttgcgccgcccgcgccccaggcaagattatccttgccggcgagcacgccgtcgtccatggctcagccgccgtcgccgccgccatcgacctctacacgcgctgctccctctgcctcatgcccctcgctgacgacgaggcggccgccacgttggagctggacctcaaggatcctggcctcaccttctcgtggccgtgcgggcgcctccgcgaggtgctgctgacagatgaggcggcgggggcacgggaggcgaggccatgctccccggaccggctggcctccattgccaggctcttggaggagcacgagatccctgaggccaagatctggctctccgccggtctctctgccttcctcttcctctacacctccatattggggttggttcgcttgctctgcctctatcctgaaagcaatccttgacgtaatcatgaaacctcctaatgggtatggaggactttgggccacattgtaggtgtagacccgggaaggtgacggtgagctcggacctgcccatggggtcggggcttgggtcatcggccgccttctgcgtgtcgatgtcgggggtgttgctgacagctgccggcgtggttactgcagtcggcggcatcagcggcgagggcatggggtgggagttggtcgggaaggatgatcttgagctagttaaccggtgggctttccagggggagaagattatccatgggaagccttctggcatcgacaatgctgtcagcactttcggtatgctctcctctttttcatggaaagtctttcgatttagtacttttagatgccggctctgttggacatccaagtgacacttagttgaatgaatgagatgatgcaaatacagataatattgttacagtcatcaaataaagtgacatatcctattttagattcattatcattaccgtgttaagtttaggtaccagccatgcatgttgtgctagttccagttatttccaggaatctaaacctccctttacttgttatttgttttccttggttttgcatatactaattaaatctgttcctgattgttaggaagcatgatcaaattcaagaaaggggaattgacaaaccttaaatctagcaacccagtgaaaatgcttattacggatacaagagttggtaggaacacaaaggctctggttgctggtgtctctgaaagagcctccaggcattcagatgctatggcttctgtattcaacgcagtgaactccattagtgaagaggtgtcaagcattgttgagttagcagctaatgatgagatagctatcacctcaaaggaggaaaagctggcggaactcatggagatgaaccaaggtttgcttcagtgcatgggtgttagccattcttcaatagaaactgtactgcggacaacattgaaattcaacttggtctccaagttaacaggagctggaggtggtggttgtgttttgaccctgataccaactagtatcctttttatgcctaacattttacagactttcattcatgacttctctattgtgaaaataccacgccacctatatatgattttatatctaataactcaactttcaacaacttttgttctttttggacatttagtggttctgaatttagcaagctaaatttcagaactacaataatgactacaaaagaatgattctgaaattgctatggatcaaatcagtatacattgttatgaaatgtcatagtgtagagaagcggaacataaatgacatattgcaatctaaagattctcatatttctttacaatttaaatactcaatttcttcatatctggcttctgatatatattcactcattgatgtttagtcctgttagatatgcatttttactacgttcaatgcccttgttctggtttaagaatgcttattagatctttattgtacttctagcttcgtcacagagtccacatactgacactaagctatgtgactcctcttctgttgggatttatgcctatcttttagtgatgcatgatgtttccttaacatgaatatcagtgctatccaacttagttctggagaaagtcattgcagagctggagtcgcatagttttcgctgctttaaagttgaggttggtggacagggtcttcaagtttgccaaggaggctgctcctattttaatggagatgttgtataatactttgtagttatggattagtcaacggtttgagatttgttcttcacactgtttcttctagattaatccattagttatgtccttattttagccccgggcagttcctgtatcaaataatcctaccgtcgcatgattgcccttggggtttgtatcaaatacaacttttttgctgatgcaactgttgtacgagggaaagtgctatggtagatgtgactactacctccaaatttatctattttat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0329300, RefSeq:Os10g0329300