Os03g0622600

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Revision as of 12:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0622600| Description = Conserved hypothetical protein| Version = NM_001057221.1 GI:115454170 GeneID:4333478| Length = 6809 bp| Definition ...")
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Gene Name

Os03g0622600

Description

Conserved hypothetical protein

Version

NM_001057221.1 GI:115454170 GeneID:4333478

Length

6809 bp

Definition

Oryza sativa Japonica Group Os03g0622600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24393471..24400279

Sequence Coding Region

24393762..24393769,24399915..24400012,24400089..24400240

Expression

GEO Profiles:Os03g0622600

Genome Context

<gbrowseImage1> name=NC_008396:24393471..24400279 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24393471..24400279 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcgcggtgccgcttcccgctccttcctcgccgccgtccgtggccgcgccgcctcgtcggcgccgcgcatccgcgcggctccgctcccctccgccccacgccgccgcgtcccctcctccgccttctcgccatttgccgccgcgaggccgatgtcggcgatgatggggtcgccggcggcgatggcggtgaggctgaccgggcacccgtcggcgagcgtgcgggcgtgctgtgagctctcccagggtaattag</cdnaseq>

Protein Sequence

<aaseq>MASRGAASRSFLAAVRGRAASSAPRIRAAPLPSAPRRRVPSSAF SPFAAARPMSAMMGSPAAMAVRLTGHPSASVRACCELSQGN</aaseq>

Gene Sequence

<dnaseqindica>6511..6518#268..365#40..191#gttcccccacccccgccgccgacgaactcccccctagccatggcgtcgcgcggtgccgcttcccgctccttcctcgccgccgtccgtggccgcgccgcctcgtcggcgccgcgcatccgcgcggctccgctcccctccgccccacgccgccgcgtcccctcctccgccttctcgccatttgccgccgcgaggtaaccgctcgcgccctcctgatgacgtaggtgctgcatggtgtgtgatgttgaccggtggttttggtccgtgcaggccgatgtcggcgatgatggggtcgccggcggcgatggcggtgaggctgaccgggcacccgtcggcgagcgtgcgggcgtgctgtgagctctcccagggtacccacttctgccgcacttgtcaggatcgctaacaagttagtgatcgtgaatcgtgattcattcaaccatcttatggcatgattttgttagaatcaaaatattgcttctcccattctagatgcgtagtttttgtgtttgcgcaattgatagcacacgtgatgatttggtatgtatgcaatggttgaatagctagctttgataaatcttgggttgttaggctgtgggggatgttactgcgattttgatgcacttctgcttctatgaattcaaagttgcttgaaatcttgacttggatgtatgcttatgcatgttgtgcttcacgtttgatatctttatggctatgaatgaaaattgtttgctaaaaactgggctccctgtcgtcctcgcgcgggcgaaccctagcccctggccgccgccacacccctcctctccccggcctcgccgccgtcggagcgcgtcaccggaaaacgtgcggccgctggtatggcggcggcgaggctccaacccaggcggcgcgggcgcctcggcgcgaaggggcggcacggagcttcgggaaggccgcggcggtggcgcggcgaggagcggcggatccggcgcctagcatcggccatgaggcgagtggcggctggatccagcgtctccgctgccggatctgagccatggtggtgcgggagcacggcggatgcggcgacgccgatggcgcgacgaccgtggctggtcggcggtggtgcggaagcgtggcgtcggcggggagacgcggcatcggcggcaagcgctacggctgggggcgcgggcggccgcagtaggcgcagtggcgcgacggccgtggctggccggcgggcggctgtggccggcagtgcgacacgacggccgtggctagctggcgacggcgaggccgccacggcggagatagtgccggcgagctggcggctggtggcggggttgagctaggcggcggtggttctggtggtggtggtgacggcgtcatggtggttcaaggcggcggggttggcgatggtggcggggatggcgtcggccgagggcgcgaaggcggcggtattggtccctgtgcggcgacggcgcggtgctcagtggcgacggcggcggtgcccccagatccgcgcctctcggccggatttggagggtagctggctgtggtggttggagacggcggccgacttgcgacggctggcgacggcagttggcgacgtcggcggtgtggccgcggtagttggcagcggcggcgttggccgacgacgccgacggacttggcggcggctcgcggaggcggtggctggtggccacgacagcggtcaccggaggcatggcggccctggacggctagccaagggcgtgggagacggctgcatttggcgggcacggcatcgtctggtggaagggtcggagaccagcttggcgcagagaggcacagccgatagcagtggaggccggctcggcgcgagaggcgcgggcggcggagttggaggccggcttggcgcaagaggcgcaaccgatggagggaggccggcttggcgcgagaggcgcggccggcggtggaggaggcgacctaggtgtgaggaggagcagctggtgggtgtggcgcgatcttcggcgcacgaaggctggccggcgggggacgccggtgcaggggtcccacatgtcggcagagcttgtgtggtggtggagcatcggtgtgtcagccgtgggtctcacccctcaagggcgattgccgggcgaaagcccaatcttggctcctttgagtcccgacggacggcggtggcggtttttccgtcgcttctcttcttgaagacgtcgttttggcatcccctagggagcgatctcagctgtgtccctttgttggtctagtggcggctggtcacgcttagcggcggccggtccggtgctagccttctcctgggcttgtgtgttggcgatgttggtgtgtgggtggtgggtttttttctttttcgtggttacgaccctccagggttataatctggtaattttttcctgctttatcgatagaacttcgcacctctcgtgcgagtcgttcaaaaaaaaaggcaaaaatcgctacaggacacccaaaaaacacgtaattagctgaggggcacctagaaaacgtggaactgccccaggacactacaaaatttgtgaaatttgccgtaggacaccaagctcattattttattattttccagctgaaagtgacgagtattttttcaaaatgcctagattgcccccgcgtcccaatctatgccgacgcgcactccggtggaaccaaactcggtcgcacgtttggatggaggagcgatttcgcaatcaagaacctggctgcggcttcatcgccggtcgcgacgcgctgctctcgccgccgaggaggcccatctccacgtcgcggtcggcctgcgtcggcgccggcgggggcgttgcgccggtgagcaatatctggatgagcacgagccgcgtggctttggcggtgatagcgacgagctgcaggatgacgccgaacgcgtcgaaccgcgcctcgccataggcggcgacggcgatgcccgcggagatgccgagcatgttgagcatggaggcgtggcggaaggagtcggtgcggaacgcgacggcgaggcagtagacggtgacgggcatgagcgccttgagcatctggatgaaggagacagagaggtagatgtatgcggagttggagaaccagagcgacagcgcgtagagcacgccgatgggcacgacggagacggcgtagaggctgggcgtcatgggcggcgacgtcggctcggcgacgacgcggaggacgcggatgagcaccacagtgagggaggcgcaaaacgccgtgtggaccatggtgagcgatacggggaatggccagttgtacatcgtgggattgaggatgtacttgttgtacatgatcaccgagaagctgaatgtgatccacacgctcacgtacgcgtaggacagaagcagtgacttgagcactgacggcgacggcgccggagaagaagacaacgacgacacaacgtccatggccgtggcgagcgcagggggcttggtaggagaggattgatgtggcttgagaggtgtgacgccggcgccggcgggggcgtcgcgccgctgcagcccagcaaccggagagaggagcagacgccgctgcagcccaacaaccggagagaggagcagacaagttagacggcgtacgtcgtcgccggagagaggagcgagagctgcaggctgcagctttccgttgatctccagccagcacgtccaagagctccgccacctcaggaacctgatgacggcggcgactctagcgatgggtcccaccgacggctgcacgcggcggactctccggcggcgagcttcgtgatgccttccgtcgagtggtgtgtggcgaccgagtttgggacgtgggggcaatctggacattttgaaaaaatactcgccactttcacccggaaaatgataaaataatgagctcagtgtcctacggcaaatttcacaaattttgcagtgtcctggggcagttccacgttttctcagtgtcccttagctaattacgcatttttttgtgtcctgtagcaaattttgccaaaaaaaaattgtttgctaaacacagtagactgtcatgttaattctttgctatcagcactgaaattactgatagtggataaaatttttgctggtggattcattgggtgacaatgatggtgcatttgtgccaatgtgtaaggatatctatgaagcctcagtcagcatgcccatgttcattgtttcctgttagtagccatgtgatcagaattaaattgtttgggcatgactatcataactagctgaggattgaagttgcgtgtttccaaatctaaggttgtgttttgttttttgtctagggttaaaataactataaagtgctcttatctttaccaaattgttgtgtttggtcatacaactgtaggtagtccaatattctatattgtatgggttcactagattagcactttagcagtatataacttgatctagaaccagatcaaggttctaaaaaacaacatttagtttcatgtggtcatgctcatgctcatgccaccaccgcgcttaagcattacaaggttgctgtacccattccttgactgcagccttgtagaacttgttttagaactgtgcctagagtgagttcattgtggtgctaactccatgccggtgcttgagacttgagaggcttttgccaggtgaatataactattctgtgtggattaacttaactccagtactccactaatgcttaggattaataaaaaaactgtactggtgctatttctcaacatttatgtgattttgactatataatctggtcatgccacaaatccgatttctcttcttatagtttctgttgtttaatgaccaaagtgagacatacactagagtgagggatttatcccatattgtgtcgtttacttgctcttttgatgaagttgcattacaactaatataaggacatcaaaattgggatttgataggggaaaatgggaaagatggttgatgctgaggacataaagaatgatttgggataccctattccctaatatgctgtatgtcccccctttccctaactgttatttttttttatcaacaaaccattgaagttgtataataaggatggcaattactctcaagaagcaattgtatgagtatgacaagtgtaccattctgggccttactggtatgttgggtttactgcttgaaataggactaggcagttaaaaggatttcctggagataaatttgattgtgtattcttttaaaaatttggaatatattatatttctttagcatacttatgtgctatttgagctattcaattcatggattctgtagaaaggctaatatgccaagaaaattttgtgttagctatacttacatgctatgtgacctataattttaacgcctggtacatgtgggctagatctatcattggtacttctgcccccatgctcaaagatcattaccgcacactgtactaatgcacatccaatgtctgttattggaatcatgggaataattttgtttcttttaacacaataatgttggatatttcatggcttctgtattggttaattttactataattgaaacactccattgttaccaacatggtatacattgtgtagccatgctttgcactgtgattccttctctgattttatattctgaactatttattcatgtacagtatgagagaatacacctgtttgcaatggatctcgcttcttgttgctgcatttcttttattatttcgtctgcccaaaccactcctctgctaacaaattctctcctcatacactagcttcaaatatttttttcagcaatgctgaatgttttgttgacttgaggatttctgtggttgggatctgttaggaaatggagatgatgtatgacacgtgggaggccactttaaagaatagcaaaggtgctaatgtcgaagcactgcacttctgttattttgttaacctaaacttgttaagaaatcgctaattcaatccatatagctgaaacggaataggatattcattgcttagggggggagaaatagtgaaaattataagttttatttctaagtttctatttatgatgtcaggaatcaaggccattcaacacctccctcctctctctctctctctctctctctctctatctgagactgaaattgttctgttcttttgaacagtaatatattcttaatgatcaccactggcatatcttcattacagatgcatgtagaatcacaaagcctagagaacatgcatttatgcactcactaattttcatgattggggcttatatgttcaaagttacaacaacatttctgtattcaacaattgacattgatctcacaatgtccatgccaaggttttcccattctgatcattttcgagaaaaacatttttcgaccatgatgttatcataaagtcctctgaacatgcattagcaatttcagaactctgattctctccactttcttagattattgactttatcatgttaatttggtgtatcaaagaactaatttcttgtagccatcttattctgtactattttccttttatgtccagcctatatgatatgtgaccttattttgcaggtaattaggcttgaacagtgctgtcccgactctgttaggatgcaattctttttagggttacagaagctctctggctcgtttttccccctgcctaatgggaggttgtaaggaactccctattattacttcacctgtcacctagtgaaaataacagtcaacatgatttttacattaataatcccctgttaaccagttacccgttatgttcatttggtcgtgaaatattggatgaagcatcattccttttcatgggaatgaatgttcttgttttgcaaagtttaatatgttcagatttctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0622600, RefSeq:Os03g0622600