Os03g0632800

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Revision as of 12:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0632800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001186623.1 GI:297722376 GeneID:9271374| Length = 612...")
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Gene Name

Os03g0632800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001186623.1 GI:297722376 GeneID:9271374

Length

6125 bp

Definition

Oryza sativa Japonica Group Os03g0632800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24934634..24940758

Sequence Coding Region

24936145..24936268,24938881..24938980,24940255..24940642

Expression

GEO Profiles:Os03g0632800

Genome Context

<gbrowseImage1> name=NC_008396:24934634..24940758 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24934634..24940758 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcccgcccccgcgtcgccgcccaaggccgacggcggcgaggacgaggaggaggagtgctccagggccgtggtgaaggaggagccgcaccaccagcaggaggaggacgacgacgatgcggctgcggctgcggatggaggggaggatgagaaggagaaagtggaggaggaggaggtggaggagcgggggaggaggaggaggggcaggccggggaggaagagggggaggcgaagcggcggcggcggtggttcggctgcggctgcggcggcggcgagaggaggggtggtgatggtgaagcgggagctgctcgcgaggtgcatgacgtgcccgctctgcggccgcctcctccgcgacgccaccaccgtctccgagtgcctccacaccttttgcagaaagtgtatatatgagaagttgaatgatgaggaggtagaatcctgcccagtatgtaaaattgatcttggctgcactccagttgaaaagcttagagatggaaacatacctgcctcgtcaatccagaagtacctcatgcagaagcttggccttcctaacgaggcagaggtaagagctatatctgcctcgcatttttttttagattactatcatgtgtga</cdnaseq>

Protein Sequence

<aaseq>MQPAPASPPKADGGEDEEEECSRAVVKEEPHHQQEEDDDDAAAA ADGGEDEKEKVEEEEVEERGRRRRGRPGRKRGRRSGGGGGSAAAAAAARGGVVMVKRE LLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGCTPVE KLRDGNIPASSIQKYLMQKLGLPNEAEVRAISASHFFLDYYHV</aaseq>

Gene Sequence

<dnaseqindica>4491..4614#1779..1878#117..504#acgagcccacgaacccacacgcaggaggaaggaggccacgacgcagcgcagcgcgtctgcgcttctccacctcccccctccacctcgacctcgatctcccctcccctccgctggccatgcagcccgcccccgcgtcgccgcccaaggccgacggcggcgaggacgaggaggaggagtgctccagggccgtggtgaaggaggagccgcaccaccagcaggaggaggacgacgacgatgcggctgcggctgcggatggaggggaggatgagaaggagaaagtggaggaggaggaggtggaggagcgggggaggaggaggaggggcaggccggggaggaagagggggaggcgaagcggcggcggcggtggttcggctgcggctgcggcggcggcgagaggaggggtggtgatggtgaagcgggagctgctcgcgaggtgcatgacgtgcccgctctgcggccgcctcctccgcgacgccaccaccgtctccgagtgcctccacacctgtcagttcctcctcctcctccctcctaccttcctcccaccacgccgtccgtgttgaattcaattcaattgagctaggatccggtttctcccacgtccccgattcggcgccgtacgtggggatttcgccgtcgccgtggctcccgcgcgttgacgtgtcgcggccggccggggatttcgccttcatgggaggatatgccctcatgtcatgcctctgtgccttgctaggcgtgacccgatttccaacgtttcccgtgtgctagctacctgctccacttttctagtaacaccgtaacacgcactccaggaggggaatgccgtgttgtttcacgtaaatcattcacccgtctcatggatcgctgatagctctgccatttttcctttttttgattgagatagttaagcagctcagattcactaactgtcttactgaaagctcgggtgctccagcatggtaatctaccaagactgggatgagctcactattcatcttcgggagacaaggctggcctaaatatgctacttttatgtggccccaagcaaatgctagcgtctgtttaagattcgggagaatgctgcatgcatttccgggttgtcgatttggaaacattttgctcaagtaattaatgttaggctgtccattgtataaagcagagtgaaatgctacagtagcaacttaacaaccaacgtcattcaccaacgacacaagtagatcctgggttgaatgttgttagtaactagtagtaattcaaaatccagttgtgctgctacttgcattctttatgagataatttcggctctcaaatttatactttatcctcctaatctacatatgacatgccccaatatctttggtaaccgatagtatattttcagttggagttgaattcaggcagatgttacatatccgctattacgctattgccaacttattcgttccacttttaatcaattggaacagtgctgctagtgcacatctggtcagcatagaattcgccttttgatattttcagagttcatttggaagaactttcattgtttggcctctttttgggataactgtagttttattagtggttcttcggtcttatgtgctaccttttctatggattcttgaccctatcactaatttcacagttaagtttacaacacaatagtacaagtagtgagaaaaccagttatgcgtcttgacttaatttgataaaaaaaaggtaaaaaaacacaatatttgattgctcatagattccacagctctaattttttcaccctgatgcagtttgcagaaagtgtatatatgagaagttgaatgatgaggaggtagaatcctgcccagtatgtaaaattgatcttggctgcactccagttgaaaagcttaggtatgcttatcatcatgtatatgcactcaaattttattgagattgcttgtccctgtagcttgtaaggtcaaaataactgtgtatttgcacttcaattttgactgtactgttaaatttcctgcatcttctatttattactcctatatgatatgactaccaagtggggcatagtatgaatagagcatgtcaacttggtactttgattgagatttccttaataaacaaaacactaggaagtaatacagtgggaaaaaagtagaaatgttacatcctgaatgccttggtgactgtttgtttaactccaagtagctccccactatttgagtaaaatatgtacctcagggtttaaacagtatcacctgggatattatggaatcttagacactttttagttaagctctacgtaatacagtaagcaatcatacaggactattttgtacagtgttgattctgttgacttcagtttcatgctttttgttctgcagaatgtaatctggaacagatattctgcctcttgtaaattcatatgctctaaagaagaattttgttttcctgctcttatttctgtagttccttgttgagtgtactgatcccaaaggtttgctctcattttactgtatgggtactttgtagcctgtgaagccattggtacttgtttgatgatttatattgcatcctgtgaaattgcattattaaagtatttatcattgaaaatgcatctgatttattttttgcatatgtcctttagttggaaaataaatttgacgtacttctattcatgtgattctgcactggtgtttgtggcctacacctacttatactcatttctttatgttccaacttcagggctgatcacaatctacaagatgtaaggtcaaaaatatttccattcaaaagaaagaagattagtgctgacgaagtagcagctcctgttttacttcccagtaaaaggaaagagagatctatctcttctctggtagttgatacgcctacagtaacaccgacaggcttgacagggcgacggacaagagcagttaccaggaaagctgctgccttgcgtggccttggtcctggtattgatgatcctgtgaaaaaggaaattgataatggtgaaaagcatgctcagaattcaagcttgcccactaatttgggcaaagtgccacaaacaagaagacaggtaaacagaccacaccttatggggtacccatctctcatgcactttaatgaaagttacattggacttggctgtgaaatagtgatactaattactaagttttcaaactacaatagctagaagaatgcacatgccagcaaaaattgatcctgttgtatgcagatgtcatcaaacgcagaggcatcgaaccattcctccaataaagataccgaaggtgatcgcaaggacctggccgataagactgatgagctctggagacctttaaattgtttggtagaagctgcaaacaggacaaagtcctcccgatcaagttcacagagtccatttgttaagagagagcaacttagtgactctcctgggagcacatctgttaacaaaacaaagtctagggaatatatgcagaaatccaaaatagaggatgataagaaagatgtacctttgctaaaaaggaaaaaccaaaggactggacggaggagagaacttcatgcccaatctgatagtaagcctgaagctgcagctacacaaaacgaaaagaaattcagttctatatggttttcacttgttgcatcatttgaacagtaagaattggcgattcatcgtaatataactttggtttaatatttagggaaaaaaagaattgctgccatgaacttttatctgatcctgttccttttttttcctgattattttcagggaaggagacccacctttaccacagataccttcccattatttgcgaataaagtgagctcccatctttcccagcgtttccttaaggtttatgaaaattatagtttaatctgtacatggccttcatatagatcttgtttggatttatcacactggactgtcagtagatatgttatgataacaacaccaatatccaagaaagaaaatgcattagggaggaacaaaagaaagagatacttacatgatttgtaatgactaggtgcaagctgataatataaaagaaaattctttgcatacttgagctgattggagatagaagtcacttggttagtttcagtgtaaattattgtgaatgaggactttgatcttccactgatacttgaccctgattcaagaggcagcagagccgaggtctgacatttggcaacatgtgtgtttccagcttctgcacttctctgctagtctgttagctacaatcttggtgttgataaactgtttctttaactacaaatatcgtgctaaaattcgagtctaattaatttttagttggaaaatatattttgctcgcaaacttctgctaggtgctagacagtgtggctgcattcaagagttggaagatatgctggtctatagtagtgttgtatgatgcagattcagttgtataacatctaggtcattatattattttgcgacttgatattagctggcagatctgattatggctattccacactgtgttttacaatagagatggaaacatacctgcctcgtcaatccagaagtacctcatgcagaagcttggccttcctaacgaggcagaggtaagagctatatctgcctcgcatttttttttagattactatcatgtgtgactggtattgaagtagatcttttggacactcttgtgctcatctggacacggcaggctgcagatttgcttcatttctgctctagtttctgttatgggcctcttttcgcaatttgagctacaaattatgcttatcagaatccatgtcatgttgatgatgggtcaatttaattcataagaccataacttccagtttgctgtgtatttgtttttccaaaactgtcattttcctattttctttaatcgtccccagactgtatatcattttttagataatggaaacttttattgaactcagtcaattacatcaaggtgatacaattatcttgagaacacttccggcctctgcataactaagatgcacacagctaaacatacaaaaccacactcaaaaggaaaaaagaatgacatggagtattgaggaccatcaatccaaagactaaattgccacccatgaacaactccttggccatttcctccaaaagcataagagccaccaatcctaagactagatcgccatccatatccttgggtaaaaaactccttgaccaccttctccaaatgtagacatgccgcaaccaccattcccacgaaccatatccagactgcatatcatgatactaattgttactccctccgtttcatactgtaagactttctaacattgcccatattcatataaatgttaatgaatctagatatatatgtctagattcattaacatttatatgaatatgggcaatgctagaaagtcttatattgtgaaacggagaaagtactatatattttcctctccccatagtagaatacctcggagcatttttaacttcctgaaaagattcacacctataaacatcgctgtacttgtcgcaacattttctttatcatggaacttgttttacttagtagtgaagatccactgtaaggtcatctgaaaatatcgacttgtctggatttacaggtcgaaataaattgctgcgggcagccagtgaaccctacacaacccctgtgcaatttagtagaggtgtggttgagggggcgatcaacacagacaacacagaccatgataggctcccctgccaaggagtttgtaatggtgctaacttatgggcggccaaaggccatcacgccatgaatggcaccacaaacacaaggctcaagccatttttcgcctagaggcgggtcccgtttcctgccattttattgggcccatggaagaagaggtgatccgagataaacctccttgatacatacatagcctcacaagtcacaatgcggttggctcacttggcagccagcccttggcgtcacattcatatgcattcattgatgttattcgattccattaagattgtctttttcttcattatttatattatacaaaaaggtgtgtaaagattagcagaaaaaaggctgttgtgaattatctgtatacctgtagtcattattgctgtttaggttggttataaagagtctatatgtatgagatgactagataaagtggatgtggatcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0632800, RefSeq:Os03g0632800