Os03g0633900

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Revision as of 12:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0633900| Description = Single-strand binding protein family protein| Version = NM_001057250.1 GI:115454228 GeneID:4333513| Length = 4185 bp...")
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Gene Name

Os03g0633900

Description

Single-strand binding protein family protein

Version

NM_001057250.1 GI:115454228 GeneID:4333513

Length

4185 bp

Definition

Oryza sativa Japonica Group Os03g0633900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24975543..24979727

Sequence Coding Region

24975903..24976112,24977521..24977672,24978338..24978419,24978503..24978641,24979348..24979700

Expression

GEO Profiles:Os03g0633900

Genome Context

<gbrowseImage1> name=NC_008396:24975543..24979727 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24975543..24979727 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttctcctcgccgccgccgccgtcgggccacacaaaaccctaaaccctaccctgagcccgccgagctccggcggccgccgcccccgcctccgcttcccgctgccccttccgcggggcggccacctccgctgctccgcggggtaccgcgaggcggcggcggcagcggcgtcgacgtcgtcgacgacgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggctcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcgcgcgggggcgcctcgccatctggaagtcggccaccgagaccacatgggtgactctagcattttgggatgacctagcggttgtggcttctgagcatgtgaagaagggtgaccgaatatttgtttctggacgccttgtgtcggacactgttgatgagggccctgagaaacgacaggtttattataaggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatgagccagaggcaggcctggataccttaggtggaaagcatggagattatgttggttctacctctggctcgagtgagggtaaaagtagggaccatgttgactcatcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgggataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatgacacctgacaccgacactgaagcccatatgtga</cdnaseq>

Protein Sequence

<aaseq>MVLLAAAAVGPHKTLNPTLSPPSSGGRRPRLRFPLPLPRGGHLR CSAGYREAAAAAASTSSTTTTPRPTEIPWSRELCNSVRLIGTVGTEVELRQLPSGGSV ARGRLAIWKSATETTWVTLAFWDDLAVVASEHVKKGDRIFVSGRLVSDTVDEGPEKRQ VYYKVVVQQFNFIESFQQVQLYEPEAGLDTLGGKHGDYVGSTSGSSEGKSRDHVDSSS RSTEQLWQAFFANPFDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAI LDSRMGSLQGNDRKPVAFMYADDFMTPDTDTEAHM</aaseq>

Gene Sequence

<dnaseqindica>3616..3825#2056..2207#1309..1390#1087..1225#28..380#aaatccaaacgcccgaaaaatctagccatggttctcctcgccgccgccgccgtcgggccacacaaaaccctaaaccctaccctgagcccgccgagctccggcggccgccgcccccgcctccgcttcccgctgccccttccgcggggcggccacctccgctgctccgcggggtaccgcgaggcggcggcggcagcggcgtcgacgtcgtcgacgacgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggctcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcgcgcgggggcgcctcgccatctggaagtcggccaccgagaccacatggtaatcgccccgtgatatgccgtagcgctcgcctcggttccatctatgcgtctcgttttttcagtttctctgtcgttggattggatgccggcaacgtgttgggccgtgtgcgccagtgtagcatgtggccaatgaactcggcattctggcgatatatgcagaagaggaagattttgtatctgttttgcccaactctccataattaaatggggtttgattttttgcattataaataggttgttgttatacaatgtgcaagagtctgtgtatggttgctagctgcacgtttggtgaaattttactaagaattaattgaactaaattgttatctacaatgacttgaataattgaaattgagttattgaaaagagcactctatttgagcagcagcaaaggtttaagatagatgtcccatttagcattggttttctgtctgtttggttagctgtctaaaggatataggagtaaataacgtcacaagattttgaaacacattggtcaacaaatgagttgtggcctcttgaaaataattagccaactaagcatgagttggaggtttggagctgtacctccttcgtgctatgtaagactagttctttagcagtcgtttcagagtcatacaccttaaatatttgtggttttattacaagtttcattattactataaattgtttccgagtgcttaatgattgtagtgatgctttagggtgactctagcattttgggatgacctagcggttgtggcttctgagcatgtgaagaagggtgaccgaatatttgtttctggacgccttgtgtcggacactgttgatgagggccctgagaaacgacaggtttattataaggtataatctctggtaatatttctttctttgagttattttgattcctttccatgcttttataagaagaatcatatgtttcacaggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatgagccagaggcaggcctggataccttaggtatggatgttatgtagcctgtaacatctttgatactatcatgtgtattataaaacggcgggtttcaaattcttgtgatggagtagtgaactagttgaagaataccagttccagaaggccatactatcacatatgtaaacaaataatatttcaattaatgttatctgttttccctaaaagtaaagaaatagcacagaacattgcaggccttagttcagtctttgaatactcttgaaaataatgaaaggtttgttgcattctgaatttctggcaatgcatagcataaaacttcctttcccaaatattttgtgcggaagtttcagaaaacccacatataagcattagttctcacacaaccctaatggagaataattgcattgtgggttgtctgtgtggtctaatgtgtgatacatggtcaattaatatggaattttctacaacttttttcattaaagatgggattgagtggagctcttgcttatactgggtttctgaaactcagaacaaaatgtatggtggaaaatacaagttaacttacttacttttctgtatgtaagttcttcaaatacaagttacttcacttatttggctgctatgtagctgtttaatactttagtgatttaagaaatatagaagagaagttaactcttttctgtataaccaaggtggaaagcatggagattatgttggttctacctctggctcgagtgagggtaaaagtagggaccatgttgactcatcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgggataacaggacaaataaggtaactttcttcttattgttcatttagacattcaaatgcattatcttgtaatatatattacatgataaacggactaatggcttctgttcttgggtaaaccatctacctccttttaggagggtcatatcctactaagtactgctgcaaagatttgagagcacttctaatagtccaaaacttctcagataattaaaatactactatatgaagtattaatggttcatggagtttggctgaacattgtaaaacagaaacattgaaggtgtcaaatactcaaatgtaatcatgaaggataaaaaaaaaaggaagttgcaacatagtcagcatagcgatgtggctatattgttatttgagtcatgcaattgttttttggggttatttctagtgtcttgtaaaattgtagaaaccacccaatcctgaatttataaacaagttcagtataaatgaaatatttatctggttttccatcaagccagcatatatgctgtaggttacttgaaaaacctgcttgtcatatacatgggtttgcttcaaaccataaaactgaacatgctcttgttgcatcagaataagtttcaaagtattctttgttattccctccaaagaaagtatttttagttgtgtggcacaactagtgcagactaattaatagctagatgcctcagtgcaaccatgccaaccacttttggtcagggcactagtggaacaaagaaattctaaaataagtagatggataatctatagtgaattgtgaagtaaaaaatttttgtattaggagaaacaaaaggagtttgctgtgaattgtcaatccttagtttttcctttatttagtttgtcagaatttagctgtttgtgtttctcctaatttttttattgaatttaattttgatatctgtatggtggtctgacctcagtactattttaaactctttttaattttgctttccagattggctgaccaatttgaattcattcttacagtcaactattgttttgcattaaatatctgtccaggaattatactccctcttttgccttttcactctccatttatgatttatgaaatattgccatgggagtaatagggactactttgtttgatttattactggagaatctccaaatgaagctacttttcttgcatttgtctcgcgataacttgcaaaagggttaccatgctgtatcaggttgtgaaatcccatgccctctttcttccacaaagctttatcatggaagttggttgcagttcttatttgtgcatttatttgtttggtcaataattcaggttcaatacatgtctttttcaagatgttctggagatttgttttaataatgaatacgtactatttatggctacaatgtccctcttatgctacattttcactgattggtgtgcatgtatgaacagaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatgacacctgacaccgacactgaagcccatatgtgaaaggaaacctcccattcaccgatttatcatagcactatgtattagatagaaaatgtactactgcgatagtgcacctgcgctccttcaattttgttgtacataggtagaatcgtgaagtttaccatagaggcgtgcggccatctgttgtagtcagtagtaatgacaaatgcagatgtagtaaagaatcggatggccttcccttaaatttgcctgagaaacggtgtacatcacttggtgtgtttgcatcagctgagcctcaactgacaagtgacttaattacattggcatgctcattggcttagatggtgcaacaatgcaatcatcatcatatctgccatgagttgtgacctgtaaaaaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0633900, RefSeq:Os03g0633900