Os03g0638200

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Revision as of 12:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0638200| Description = Similar to Transporter-like protein| Version = NM_001057264.1 GI:115454256 GeneID:4333528| Length = 4327 bp| Defini...")
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Gene Name

Os03g0638200

Description

Similar to Transporter-like protein

Version

NM_001057264.1 GI:115454256 GeneID:4333528

Length

4327 bp

Definition

Oryza sativa Japonica Group Os03g0638200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25209866..25214192

Sequence Coding Region

25210883..25211139,25211537..25211774,25212298..25212832,25212918..25213120,25213702..25213911

Expression

GEO Profiles:Os03g0638200

Genome Context

<gbrowseImage1> name=NC_008396:25209866..25214192 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25209866..25214192 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaacatacactacggatgaagcgcttgaattcatggggtttgggaaattccaactacttgtgcttgcatatgcaggcatgggttgggtcgtagagtccatggaaattatgctattgtcatttgttgggccactggtgcgggaggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggtatgctaataggagcttctggttggggttttgtgtctgacaaatatggaagaaggatttgcttactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaattattcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtgtttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatggttattttttcctgtttctggactattggcaccatcttggaggcttcacttgcatgggttgttatatcagtattgagttggaggtggttgctagcattgactgcacttccatgctctctcttgattccattctttggaactacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgcaatgcttgtcctggagagaattgctataacaaaccaagcagctcttcctcctggagttctcatataccatcaggaagcaaaagttgaccacagtgatcttacttctgagaaagaagatctcctcccagtcagcgagaaggaatgcacatttgacaatgccatgagcttcaaatatggtggtggcattgctgcattgctcaggctattgtcacgcaaattgctaagatcaactcttcttctttggtttgctttcttcgcaaattcatttgcttattatgggctagtattgttgaccgcacaactaagcgatgcaaatagaagctgcacatctgggcaaacaaatgtagtgccacagaaagatgttaacctttacaaagatacattcattactagtttagcagaggttcctggcctgattttatctgctgttcttgttgattggtttggccgaaaagcttcgatgtggttcatgttattcacatgctgtgctttcatcggaccacttgtgcttcagcagaatgagctgttgacaactgtccttctatttggtgcccgcgccgttgccatgggtagcttcacagttttatgtttatatgccccagaggtttatccaacatctgcgcgctcaaccggtgttggcatcgctaccgctattggcagaatcggtggggttgtttgccctcttgtcgccgttggcatgttgagaagctgccaccagatggaagccatccttgtttttgagctggttttattccttgctggagttgcttgctttctcttccctattgagactaaagggcgtggaatggattga</cdnaseq>

Protein Sequence

<aaseq>METYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVG PLVREEWNISAENESLLSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFL SAFSPNYSCLLALRFLVGIGVGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILE ASLAWVVISVLSWRWLLALTALPCSLLIPFFGTTPESPRYLCGQNRTSDAMLVLERIA ITNQAALPPGVLIYHQEAKVDHSDLTSEKEDLLPVSEKECTFDNAMSFKYGGGIAALL RLLSRKLLRSTLLLWFAFFANSFAYYGLVLLTAQLSDANRSCTSGQTNVVPQKDVNLY KDTFITSLAEVPGLILSAVLVDWFGRKASMWFMLFTCCAFIGPLVLQQNELLTTVLLF GARAVAMGSFTVLCLYAPEVYPTSARSTGVGIATAIGRIGGVVCPLVAVGMLRSCHQM EAILVFELVLFLAGVACFLFPIETKGRGMD</aaseq>

Gene Sequence

<dnaseqindica>1018..1274#1672..1909#2433..2967#3053..3255#3837..4046#acgccgccggccgcttcctcaccttccacggttcgctcctcgctcccccacaaccccttctctctcctacaccccccccccctcctctcctctggattcagattcatttgctcctctttttttctttcttttcttgtttatttccctccactgcgtaaaaaggacacaccctttttgctttcttttttgattttataaagaaaataaggaaagaaaagcaaggagttcctctattttttggtttgcttcagcttaccaatccaatattcatcgcctgtttgttcaagtgattcacagccgctcaaatttatgtcaggtgcacgtcgattttcattgcggtggcagtggtccagattggggaacctcccagccaaattcatttcttggtttattctcatctgaggtcttcagtcaagtccctaagggctattcttaataagctacaagaagaagcaagcaacagatcatcattcaacggatatttcagttatatgatggttgagttgtcaacggcaaattggctgcgattcatgttgaaataaaattctgtgctgtccaatcttcatatttatcttaccagtcgtcagtcatcagagcttaggaaaaaaaaaatcaaagacagggctttcattttcctacggtaagtaaagtgcaatatttatttatttattttatctgtttattaaggtatacatggtgttcaagattgtaatgaaaattcatatgtttacttgtttctcatcttccaatcaagacagtggaagatcctgcctgacctaccactgtagcatcatgaactgcattgcattggcatttctcttctgcacattcattactctgcttcgtcctgcaattagtgctaatggttatcattctggcatttctaaatacaccgtgtggtgcatactgtctgcagactgcagctgaaaagccgatcgatcaattagttactttaccaaaagtttgtactaacagtttttcttacagactcgcctttacaaagcagacgctgtcaacatggaaacatacactacggatgaagcgcttgaattcatggggtttgggaaattccaactacttgtgcttgcatatgcaggcatgggttgggtcgtagagtccatggaaattatgctattgtcatttgttgggccactggtgcgggaggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggtatgctaataggagcttctggttggggttttgtgtctgacaaatatggaagaaggtgatgattgactctatgcaagcttacatgtttcagttttctggtacaattaggagctttaaccacttcaaatctgctgttttgaatttgatttacatttccctgatctctagctgttcaactcttgaatatgtgtccttgtttcgatctctctgttacataactgataactccgatacaaacctatatcataggttagtatttgcattagtgtaaagcctctgaattctggaagcctaagttgtgtttttataagaatttatcaatgaactcaaacttcaaaggaaagttgaggctacaaaagagcctccactgtacatccattctaattatgtacttgttttatttcctcctttacgatcatggatgatataaagcattatgtatcttatttcaggatttgcttactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaattattcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtgtttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatggttattttttcctgtttctggactattggcaccatcttggaggcttcacttgcatgggtatggcaccctttgttgtcctttgtggcttatagctttcaccttttcatgctaaacttgtttgtctactgaaggtgcattctgtatgttaaggaaaggataagtaaaaaccacaaataatgcatgtatttggtttcaagaacatagtctaggctgatttctgaaaccagtgccacatgaaaaatcaaaatgctgcatcaaatggagaatgatgtctgtttgttcaggttatgcgtgtggactatttgtgtgagcacgttaatcattttcgtacttttgttgcagtatctgtatgactaataactattttgtactctctgatatcatacttctaccttcttatttcaactctgaattatctaattcaacgcaaaaaaaaacctgatttcttaacaaatgaaaaccaaaacagaagatgttcgattgagcaacggagtgataggtttttgattttgtagttcttattttatttttcataagcatatattttaagaaattatatttaataatatcccttttgcaggttgttatatcagtattgagttggaggtggttgctagcattgactgcacttccatgctctctcttgattccattctttggaactacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgcaatgcttgtcctggagagaattgctataacaaaccaagcagctcttcctcctggagttctcatataccatcaggaagcaaaagttgaccacagtgatcttacttctgagaaagaagatctcctcccagtcagcgagaaggaatgcacatttgacaatgccatgagcttcaaatatggtggtggcattgctgcattgctcaggctattgtcacgcaaattgctaagatcaactcttcttctttggtttgctttcttcgcaaattcatttgcttattatgggctagtattgttgaccgcacaactaagcgatgcaaatagaagctgcacatctgggcaaacaaatgtagtgccacagaaagatgttaacctttacaaagatacattcattactagtttagcaggtatcgtaccttaattctgtttcttcacataacatgactggctacagtacattccactagctcatcgctctactactcttaacagaggttcctggcctgattttatctgctgttcttgttgattggtttggccgaaaagcttcgatgtggttcatgttattcacatgctgtgctttcatcggaccacttgtgcttcagcagaatgagctgttgacaactgtccttctatttggtgcccgcgccgttgccatgggtagcttcacagttttatgtttatatgccccagaggtttgtatcaacttgttatgacatatagttaatgtgtctttattggtcgctaggttacatagtctctgctttattaatctgtagaaaatatcacccagtaggcagctaatccatatagccaatgtattttggcttgtaattttgaatattcaatcctcaatattttccttctattatgttggcatgatctcggccggcaatgctggcaggcaaaaagagaaatgaaaatgttctaggtgtaggtagtcactattacaaaattaagacacattgtttttgtaaaatcactcgtgtgaacactgaacacaaacgccattccattataactgacttcagtggagttctgccaggtccctgtttctggtccatctcagtgaccaaaatcgataccaatcgtgctatgcgatctgtttatattcattttttagctaaactaatttgtcaaaactctagctgataacccggagtattatgagttatgagaaagatgcatcgtctttcaacatgtgtattacacaattttttttctccttccagcagagcttatgtaccatgatctaattccatttccttacttttaggtttatccaacatctgcgcgctcaaccggtgttggcatcgctaccgctattggcagaatcggtggggttgtttgccctcttgtcgccgttggcatgttgagaagctgccaccagatggaagccatccttgtttttgagctggttttattccttgctggagttgcttgctttctcttccctattgagactaaagggcgtggaatggattgatgttcatgctgcacttcttttttaaaggaagttgggatttagatgggcatgtagatgattactattcatcagatttatcattgggggtgtacatatcattatacatgtagatttttatagtggatattaagttgtaaagttcctcaaatatgtggactttgcaaacttgggcattttatttttggtgtacccactccaggctgataagcaggccggactgtaaaatggattatgtaaacatcatttcttgtataagcatctaagaatgctttattgatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0638200, RefSeq:Os03g0638200