Os03g0639300

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0639300| Description = Conserved hypothetical protein| Version = NM_001186629.1 GI:297722388 GeneID:9270162| Length = 5040 bp| Definition ...")
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Gene Name

Os03g0639300

Description

Conserved hypothetical protein

Version

NM_001186629.1 GI:297722388 GeneID:9270162

Length

5040 bp

Definition

Oryza sativa Japonica Group Os03g0639300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25304813..25309852

Sequence Coding Region

25305417..25305472,25305577..25306444

Expression

GEO Profiles:Os03g0639300

Genome Context

<gbrowseImage1> name=NC_008396:25304813..25309852 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25304813..25309852 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaccagttcgtccctgattggagcaacatgggtgacgcatccaggacactcggcgaagatgacaacctcattgagctgctctggtgcaacggccatgtcgtcatgcagagccagaatcaccaccggaagctgccgccgaggccgccggagaaggcggcggcggcggcggtgcaagaagacgaggccggcctgtggttcccgttcgcgctcgccgactcgctggagaaggacatcttctcggacctcttctacgaggcgcccgtcgcggcgacggcggaggcggcgcctgctggcccgggcgcgggcgccgacggcgaaggaaagacttgcaagggcgacgcggcaatggcggaggaggagcgtggcgggccgggcgcggcgtccgaggcgccgcgcgagctgatgccgccgcccaagtcgacgaacgcgtcctgctcgaggcagcagacgatgagcctggcggacggcggcgacaacgccggggacctgtcggagctcgtccgggcgaggaggtcgtccggcggcgcggctcggcggaaggcggaggccggcggcggcggcggcggcgcgtcgtcgtcgatgctgagcgcgatcgggtcgagcatctgcgggagcaaccaggtgcaggtgcagcagcgcacggcgagcgagcccgggcgccgcggcgcgccgccctcggcggtggggagcgcgaacgccatcccctgcggcgggcgcgaccacggccacggccacgaggcgaccaccgtggcgtcgtcgtcggggcggtccaactgctgcttcggcaccaccaccaccacggagccgacgagcaccagcaaccggagcagcaagcgcaagcggctcgacaccaccgaggactccgagagccccagcgaggtaggcgtcctcccgtcgaacaccaacagagacgcacactga</cdnaseq>

Protein Sequence

<aaseq>MNQFVPDWSNMGDASRTLGEDDNLIELLWCNGHVVMQSQNHHRK LPPRPPEKAAAAAVQEDEAGLWFPFALADSLEKDIFSDLFYEAPVAATAEAAPAGPGA GADGEGKTCKGDAAMAEEERGGPGAASEAPRELMPPPKSTNASCSRQQTMSLADGGDN AGDLSELVRARRSSGGAARRKAEAGGGGGGASSSMLSAIGSSICGSNQVQVQQRTASE PGRRGAPPSAVGSANAIPCGGRDHGHGHEATTVASSSGRSNCCFGTTTTTEPTSTSNR SSKRKRLDTTEDSESPSEVGVLPSNTNRDAH</aaseq>

Gene Sequence

<dnaseqindica>605..660#765..1632#aagcccggtcccccttgctctgcctctgcctcttcttcctcctccttgctctgcttctgctctctagctagccttcttcctattggaagcttcttctcaagtgaaaattaagaagctagtattggctgagctgagctgagcacccagccaaagtcttgggcctacttaattaggttagttcttgcttcttttcttaatttacttctctctttcttttgatatacttttatggagttcttttcttgcactgttctacgcctttgtggacaagatgcatgcatgttttttctttattgttttaattaacgaggtataatcgtaattaactgctgaagaattacagcttcttcatcactacaaaaaggaaaaaaaaagaagttaattcttcagtgttttttttccttctttactgttttttccccttattttacaataaaaaaggttaattaattttattagaaaaagaagaagctctttttgctgttgcttttgttcttggagctgaagaagttgtttttttttttggtgccctctgcttcttctgcagtgaggtgaaggggagatcgtcgtgtcgtcatccatggttgctgccatctgatgagcgatgaaccagttcgtccctgattggagcaacatgggtgacgcatccaggacactcgggttcgcactttgatcgaagcatagatttcgccggtttgatccaggatgcagattttcctttcttttttctcatgttttttgtgtttgtgtttgtgcttttgcagcgaagatgacaacctcattgagctgctctggtgcaacggccatgtcgtcatgcagagccagaatcaccaccggaagctgccgccgaggccgccggagaaggcggcggcggcggcggtgcaagaagacgaggccggcctgtggttcccgttcgcgctcgccgactcgctggagaaggacatcttctcggacctcttctacgaggcgcccgtcgcggcgacggcggaggcggcgcctgctggcccgggcgcgggcgccgacggcgaaggaaagacttgcaagggcgacgcggcaatggcggaggaggagcgtggcgggccgggcgcggcgtccgaggcgccgcgcgagctgatgccgccgcccaagtcgacgaacgcgtcctgctcgaggcagcagacgatgagcctggcggacggcggcgacaacgccggggacctgtcggagctcgtccgggcgaggaggtcgtccggcggcgcggctcggcggaaggcggaggccggcggcggcggcggcggcgcgtcgtcgtcgatgctgagcgcgatcgggtcgagcatctgcgggagcaaccaggtgcaggtgcagcagcgcacggcgagcgagcccgggcgccgcggcgcgccgccctcggcggtggggagcgcgaacgccatcccctgcggcgggcgcgaccacggccacggccacgaggcgaccaccgtggcgtcgtcgtcggggcggtccaactgctgcttcggcaccaccaccaccacggagccgacgagcaccagcaaccggagcagcaagcgcaagcggctcgacaccaccgaggactccgagagccccagcgaggtaggcgtcctcccgtcgaacaccaacagagacgcacactgacactgacaccggcggcgcgtgggatgcaatgcaggacgcggagtcggagtcggcggcgctggcgcgcaagccgccggcgaagatgacgacggcgcggaggagccgcgccgccgaggtgcacaacctctccgagagggtgcgtcccaattctttcctccttgtctttaacgccatgggaagctgtctgaccttgacgccattggcaccatttgtggtttgtgcagaggagacgggacaggatcaacgagaagatgagagccctgcaggagctcataccacactgcaacaaggtaaccaacttaactaaactacacactaattaatcactcgctaatcctccgagattaaccaaaacttgtactagactgacaaggcgtcgatgctggacgaggcgatcgagtacctcaagtctctgcagctgcagctgcaggtgagctgtgcacttactgcaacggtttttggcgcgtaatttaaatatatatatatatatatatttatatatttatcggtttctttttttttttgattttggttgtcaagatgatgtggatggggagcgggatggcgccgccggtgatgttcccgggggtgcaccagtatctgccgaggatgggcgtcgggatgggggcggcggcggcggcgatgccgaggatgccgttcatggcggcgccgcagccggtggtgcccacaccgccggtgaaccaccttgacctgggcgtcaaccacctgcagccgccgccgacccaggtctcttacaaattgccctccccccccccaaaaaaaaaaaacattctcaaatcccagctcgtttgagacaaatttgtgcgaaatatttatatttgctgaggtattgggacagctttatttgcagggagtggggtattatccgttgggggccaaggccgtgcagcagcagcaaaatccaccacttcacgtgccaaatggaagcattatgcctcctcctgaaaatgcacccaacacaggatcaggtatgggatccttctacttctacttctacttctcttccgattaaattgtactccgtccgtttcatattataagttatatgactttttcttattcaaattttttaagtttgatcaagtttgtagaaaatatactaatattttttaaaaaataatatattatcaaaatatattcaattttaaatttagtgaaactaatttgatgtagtaaatattgctaattttttaataaatttaatcaaacctaaagaatttttattaggaaaaaagtcaaacaataatatgaaacggaggaagtatgtactagtagtacatataacataagtttggtttaggaaaatgttttttattaagagtttcttatgatctttgagaaagtatgtgctcctactcaatctgttcttaaataattgactctggcactattgtagtttaaactttccgcttatcttttttagaaagaatttgttagtacttaaaaatatgttattttgtccaggggtgtaacatcctaattataaccgtgcaacttccatactagttcaccctccgccccgaaaaaaaccaacctaagaaaggatttgatctcttgtcaagattcgttgtgaggaatcacatcctcttcgattgtttttttttgttgagacggagggagtgcattataagtagggtgctgaaactgagatggccgtagtcaattgtgtcagttatttgaggtcaaaatagtgtcagttatttgagggagaagggagtaaatttttaattttaaattgtgagcatgttcaaaattccacggacaacctagacacaatcagtatgtcaacgacttaatattattggagcaagcttgatcgggaagccgtacattttttttgtctcatagtggttagtaggtgtttactacctcctccttcgtccctaaatattgacaccattaacttttttaaacatgttttatcgttcgtcttattaaaaaaattaagtaattattaattcttttcctatcatttgatttattgttaaatatagttttatgtatacatataattttacatatttcacaaatattttttaaataagacgaacggtcaaacatatttaaaaaaagtcaatagcgttaaatatttagagacggagagagtatatatgattagcatatacagtatatatctgacgtatacacatgtatatcagtggctttcttatgggggcaagtggtaattatatcaatccacgtagaggtcatatgtactctgcctataaaagaaaatgcagagatttcaaacttttcagattaaattacacattttggtccctgtaagcacaagaaagaagggattttgactccataggaacaaagaacaaaggcatacggacaagagaaaaaaagagggggaaaagagggacaaggaaagaagcttgacttttcagagctcaatgattagtaccgtggagattctccgcataatttttagtctagcctacttccatatggttctttcaaaattaataaaacttccatatgcgatacatatacacaacaatagtggaaaaccaattatatttggaaccatgaatagtctttatcagtcatcaccctcataaacattttctttctttctttctttcacacaatacactcatagtactaaaacatatttattagttcaacttgtctgttctactgttattatcatgagaaaactacttgccatctgaaaattaccaagtggtaccccattttcgccgcgaataaaatcctttttgataaaaggaaatatctggtgcaattggacaagataagcttgaaaggtggtgctagaatccatcattttcggacaaaattttccatatgcccaaaaattaggccattctagcttcctcatgcgtgcagcttgcctagccatgtctcaattgttttgtaatgttctaagcttgtcgccatcggtatactagtcaataatacttacgtactatacctatctcttatgtcttcatctgtatatgtataggattaaccaatgtttttttcttgtgttcttggcaggataattaacaaaaaagagtgagagcaaagaggaagaaaacattcatggttgcattgatcctgaatgagtatatatggcaataaaggtaactgagctgcacagcaggacggagcagaggaatttgacagggggacgatttctttagctttttcccctctttgggaagccaggaactagctgtgatgtgcagaagatgttagcaaaatctcttgaagatctctaactgattgtaattaggggtatgatggcatgttcaaagcataaggctggtctggtcttttgtaccattggaattaacattagagacagaaattgtgccatacatttggaacaagagtagttagtataaattgacacacttcttttcaaaaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0639300, RefSeq:Os03g0639300