Os03g0639600

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0639600| Description = Similar to Zinc-finger protein Lsd1| Version = NM_001057272.1 GI:115454272 GeneID:4333536| Length = 4673 bp| Defini...")
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Gene Name

Os03g0639600

Description

Similar to Zinc-finger protein Lsd1

Version

NM_001057272.1 GI:115454272 GeneID:4333536

Length

4673 bp

Definition

Oryza sativa Japonica Group Os03g0639600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25334842..25339514

Sequence Coding Region

25335147..25335185,25335287..25335358,25335445..25335552,25335655..25335764,25336891..25337004
,25338881..25338998

Expression

GEO Profiles:Os03g0639600

Genome Context

<gbrowseImage1> name=NC_008396:25334842..25339514 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25334842..25339514 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccgagcggggcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccctgccccagtaatggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgcaatgcggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccagtgaataatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggcgcaccttctgtcaaatgtgccatatgccattatatcacaaacaccggaatgaatactgtggcacccacgccatctccaatgcctacatcaagtggatcttcatataatgcccccccaagtggatcttcatataatgcccccccaccaacttcagctcccacatctcgaccccagaatgtaaccgttgttgtcgagaaccctatgactgttgatgaaaagggtaaactggttagcaatgttgtagttggagttacaactgggaaatag</cdnaseq>

Protein Sequence

<aaseq>MQSQIVCHGCRSVLRYPSGAPSVCCALCQAITTVPPPAPVMEMA HLICGGCRTLLMYTRNADTVRCSCCSTVNLVRPVNNIAHVSCGQCRTTLMYPYGAPSV KCAICHYITNTGMNTVAPTPSPMPTSSGSSYNAPPSGSSYNAPPPTSAPTSRPQNVTV VVENPMTVDEKGKLVSNVVVGVTTGK</aaseq>

Gene Sequence

<dnaseqindica>4330..4368#4157..4228#3963..4070#3751..3860#2511..2624#517..634#ctcctccccaaccccaccctcctcgcgattcctcctcctcgtcgtcgtcgccggcgagaggagccgccgccctgttgctggtgctcggtcgatcgccgcgcagttggtgcgcttcccttccctggagccaccaccaccaccactcactgcaggcgaggggtgggtggtctacgctgcggtggtctcgtctccttcctgctgctgctgctgctgcgccgggtaaggacgcatcgcgttgctctacgttgcttcgcgatctcagatccgcgcgtgggcgagcgttttgcttactggtggagtaggggtaggggtagggtaggggtgtggtaggtgtgtgacatgctgattggtcgatcgatcgatcgatcggtgcgaatcgatcttagcttctcttcgtcttcgggagggcgatcgatcgagcggatttgctgtgggttatgctggcgctcgcgctggggtggactgggtactctttgctcgtggctcatcccactttctcgtgtttgggttgcaggtatgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccgagcggggcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccctgccccaggtatgggattctccacaatggtttaatcatactttcatctcatagcgtttaatttcatcctctctctcattcaagtctgtgtggtcaaagaagtccccccctcttctgttcaagctttagctagcctagtcttagtatctgcttcctgtattggtcaatggctttccagctcatctcatttcaatagtatgatggttcaatgttatgtagcactgccatttgtgcttgaaatgaaaaaaaaagttttgatcaattaaatatagtcattgactcttgcaagaaacatagatatatagagggaaaaaaataacttcctcattttcatatttctctactccgtataccaaggagtgataatacattaatactattaatagaatcggaccatatttgccattactacatatagttgtagtagtatgtcactatgtctatctaacaactaacatgtgtataatcatgtactaatctcattaaatattactacctatgtctgtgtcttttttgtacgcacatggcataaatattcttgaggataaggattaggaattgcagctctcttttagaaataaccatttggcatactttacattgaaacttttatgttcaaaattctaattaatactaatccttttaatttcttatagctaaattacttaggccggttacaggttggaggcacttaccaatttataaaaccttgattagatatcccatgcagctgagtgacgcggacatgatttttgttttccgatatctgattgacaaggatcctactgtttatgtggttttccatgtacaaataccatgattataaatgctctttgcaccaaaactacgtgaactcccaaacatgccattctgctgtgccatctgtctagatattgtcttttgttcttttacacaatctgccatttctaacattccaaccacttcatctctatatccttaagacattgctatttctctgcaccctgcatgctggtttgcttatgagaaaatataagcatgtcgttccacttcttcaccaaccatgctctacatcaacatgacttgatcccttggttaccttcttgctcttcgtctgaacttacaaggcaggcaaccacaatgccttttatctgaagaagagaacctaaaataacaaccttctttcttggtacaaaaagcacaagaatctataaagtggtttaaacactgtgagaatgttcttgctgccttgtgggaagcttcattcttaagccccatcttatctgggaaggtttcaattaaacacgattcagttatacccagtttggaatttggacttgtacaatttagaagaccatcaaaataatctgcgcaaaaatagtttattatgtgcacccaaaaaagtgtgttcaaatacgatcgtgtgtgtacaaaaattatcatattttgtttgcgtttgtcttccatcttttttcaccacgcatatcttctatagccatgtggcctgcatagggccagttatattgatggttggttaccaaggcactgggcacttctgggtgacaggcagtgaccatcgccataattactaattacgcacggtacgagagtggagagttatgaatctgcttttagaacagcattctgtgtttttttaggcaggtctacgcagcactagaggtgataaattagctagggggagaagtgggactgtgggagtgtagtgggttaggttgatgctttctaaaactctattcccaatgatctctctccttcttacctcctttttgaaagttcccaaagaggtactcttctgaggttaaattgctgcaaattgattcagagtgtttgctaattcataaatacgtcaatgcacttatataagttatgtaactttctaatgcagtaatggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgcaatgcggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccaggtactactactttacttctttctatcctgtttttctgattgagattaatttaatggttctgactgttgcattttatcttgtctgagaaacatgatttttttggttatattgttggtaaatatttgaatcatgtaccaaactatagatgtgaatcagttggtttgcctaaatggaactgagtattgcaaaaccagcactctacttgaatggtagtatttccacattgcaatcaacataatatagactctctgaacctgtttgttttgagttcaatgtaacgatctacatttaattcctgttcaatttagttgttcatggagcttactgtttaaccaaaatagccataaatcgtcaccgataaagtgttggcaacttgacatacgaatgcatttcttgcttatcagatttgatataattttgtgctataaaacaaaggaaaaatgttttgctgtagaaatgagattaatagaagcagaaatgtgagataattttatctaagtttctttcaatcagatttgaaataatttgtatggaacataaaaaagaaccaatttgtagttggatgcccaaagtttttaaattcaatacctgaatatcatgttagtgaaataaattaatgtagttggatgttctgttgagagtaaacaactcaacattgtcagcctagatcatactataaaagtataattggttcccacttcttccccaaaagcttcgagttacattttcatgaattgctcaatgcataacataacaatatctaatgcgatttccttgggaacaaattttctgtatgatagttgatagatagctgactcttcagtatacattatgagctgatattcttggattgaaatatagtttacttgttttattatctgataatagtttgtttgttactatctttgtgttaaatatttactaatgttttcataaaaaacaatatttgtaatgtttgccaaggtgtactccttccagtgacctgtaacgatgataatatgatagtatttcttgaattgaaatattcttgttttacactttccttatcaggctatagctagtaaccaccttttgtggtaaatactgctacactctagtaatcgtttcatgtttgttcacaatgcagtgaataatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggcgcaccttctgtcaaatgtgccatatgccattatatcacaaacaccggagtatgtataggcatagcctcgttctagactatatttctgcaagcacagttcatgctctattataaaatgtcctgatttttaactgtctggtctcaatcttagatgaatactgtggcacccacgccatctccaatgcctacatcaagtggatcttcatataatgcccccccaagtggatcttcatataatgcccccccaccaacttcagctgtatgtcacccctgcatttttatgtaacaaatcgttcttgagatgttaagaattatttatctcattctatttttaccttctggcagcccacatctcgaccccagaatgtaaccgttgttgtcgagaaccctatgactgttgatgaaaagggtaaactggtaagcccttcttttggtctcaatctaataaactgagcggtattcatagcttaacttccttttggcttgctttactaactttttacttttcactttcacaggttagcaatgttgtagttggagttacaactgggaaatagcagcgtattgtctgtaccttgttacatccttgatttgtaccactaaatacgtgaagatgggaataccatgtattacactggtgtttggttgaccattgaagaacaaaaatacaaatgttttttggaatcttgcaaaggaaagtatgaacgcctaaagttgtattttgtatctgttgattcttttctttgtatatgagctctattagactatattgtgatagaagaatgatggaatgacaaagcagtgtcacgtagttatacgtaccgtgcaacatgattgattttttagtttgtatttctcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0639600, RefSeq:Os03g0639600